prot_A-nodosum_M_contig953.25.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig953.25.1
Unique Nameprot_A-nodosum_M_contig953.25.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length237
Homology
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: D7FIZ9_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ9_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 5.420e-97
Identity = 153/233 (65.67%), Postives = 174/233 (74.68%), Query Frame = 0
Query:    6 VMTLIPCLAHAFVPHSAPFRSLADLAKPSKLLLHEHDEQVTMKLPMSRSETLRKVAAACVGGASAWGLTATGVSAKAP--VMKLPDDDASKEVQRPNDGGAIPPFTLLPSGVQITDIAVGDGVVVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQINTRKGEPLSFEVKLTKVR 236
            +  +   + HAFVP + P   +   A   ++     DE       MSR E LR VAAACV G++AW  TA GVSAKAP  VMKLPDDD++K   R    G+IPPFT+LPSGVQITDI  GDG V + GKGV +KWVMRRSNGYYVSSS EG GEPF+YRVGD KRAIKGLD+GIRGMK+GGTRRIVVPP+L YVEGC+DG PGPIP GLGPKQQINTR  EPL+FEVKLTKVR
Sbjct:    9 IFAIAQLVTHAFVPATFPHLGVRR-ATGLRMCSSPADEG------MSRGEVLRSVAAACVTGSTAWSTTAVGVSAKAPAPVMKLPDDDSAKPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVADTGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 234          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A835YL48_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL48_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.890e-47
Identity = 77/132 (58.33%), Postives = 101/132 (76.52%), Query Frame = 0
Query:  105 IPPFTLLPSGVQITDIAVGDGVVVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQINTRKGEPLSFEVKLTKVR 236
            +P F  LPSGV+ITDI VG+G  V+ G  V ++WV+RRSNGY+V SS   + +PF+YRVGD ++AIKG DEGIRGMK GG RR++VPP+L YV+G  D KPGP+P G GP++Q+  RK EP  FEV+++ VR
Sbjct:  217 LPQFRALPSGVRITDIQVGNGAEVKEGSTVSLQWVLRRSNGYFVDSSEAHNYDPFIYRVGDAQKAIKGFDEGIRGMKQGGKRRMIVPPELGYVQGAADNKPGPVPTGYGPQRQVTNRKNEPFFFEVEVSHVR 348          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A7S4J203_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J203_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.540e-42
Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 0
Query:  111 LPSGVQITDIAVGDGVVVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQ-------INTRKGEPLSFEVKLTKVR 236
            LPSGV   D+  G G VVE GK V ++WV++RSNGY+V SS+  DG PF++ VGD K A+ G+DEGIRGM+ GG RRI+VPP LAYVEG +DGKPGPIPAG GPKQ+       +    GE +  +VK T+V+
Sbjct:  106 LPSGVMYVDLRPGSGDVVEEGKRVNVQWVLKRSNGYFVDSSSNNDGVPFIFTVGDPKGAMAGVDEGIRGMRVGGIRRIIVPPNLAYVEGVEDGKPGPIPAGFGPKQRMRRVMLLLKDIPGEYIVVDVKATRVQ 238          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: B8C0A9_THAPS (Peptidylprolyl isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A9_THAPS)

HSP 1 Score: 150 bits (379), Expect = 3.970e-41
Identity = 78/136 (57.35%), Postives = 94/136 (69.12%), Query Frame = 0
Query:  108 FTLLPSGVQITDIAVGDGVVVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQIN----TRK---GEPLSFEVKLTKVR 236
            +  L SGV   DI  G G  V+ G  V ++WV+RRSNGY+V SSA  D  PF++ VGD K AI GLD+ +RGMK GGTRRI++PP+LAYV G  DGKPGPIPAG GP+QQ+      RK   GE +  EVKLTKVR
Sbjct:  128 YNKLESGVIYADINAGSGETVKEGSRVNLQWVLRRSNGYFVDSSAVSDSVPFIFTVGDPKGAIAGLDQAVRGMKVGGTRRILIPPKLAYVGGVDDGKPGPIPAGFGPRQQMRRVMEVRKDVPGEYIFLEVKLTKVR 263          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A1Z5JCU4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCU4_FISSO)

HSP 1 Score: 146 bits (368), Expect = 1.420e-40
Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 0
Query:  108 FTLLPSGVQITDIAVGDGV-VVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQI----NTRK---GEPLSFEVKLTKVR 236
            +  LPSGV   D+  G G  + E G  V ++WV+RRSNGY+V SS   DG PF++ VGD K AI+G+DEG++GMK GG RRI++PP LAYVEG +DGKPGP+PAG GP+QQ+    N RK   GE +  EV+LT++R
Sbjct:   39 YKKLPSGVVYADLRPGSGTEMAEQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVQGMKVGGVRRILIPPALAYVEGLEDGKPGPLPAGFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 174          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A7S2E2F1_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2F1_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.020e-39
Identity = 72/134 (53.73%), Postives = 94/134 (70.15%), Query Frame = 0
Query:  111 LPSGVQITDIAVGDGV-VVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQIN----TRK---GEPLSFEVKLTKVR 236
            LPSGV   D+ VG G  V   G  V I+WV+R+SNGY+V SS   DG PF++ VGD+  AI G+DEGIRGMK GG RR+++PP+ AYV G +DGKPGP+PAG GPKQQ+      R+   GE +  E++LT++R
Sbjct:   14 LPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 147          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A1Z5K3Y4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Y4_FISSO)

HSP 1 Score: 143 bits (360), Expect = 1.040e-38
Identity = 74/137 (54.01%), Postives = 96/137 (70.07%), Query Frame = 0
Query:  108 FTLLPSGVQITDIAVGDGV-VVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQI----NTRK---GEPLSFEVKLTKVR 236
            +  LPSGV   D+  G G    + G  V ++WV+RRSNGY+V SS   DG PF++ VGD K AI+G+DEG+RGMK GG RRI++PP LAYVEG +DGKPGP+PA  GP+QQ+    N RK   GE +  EV+LT++R
Sbjct:   92 YKKLPSGVVYADLRPGSGTETAQQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVRGMKVGGVRRILIPPSLAYVEGLEDGKPGPLPACFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 227          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A7S2E4F5_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E4F5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.140e-37
Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 0
Query:  108 FTLLPSGVQITDIAVGDGV-VVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQIN----TRK---GEPLSFEVKLTKVR 236
            +  LPSGV   D+ VG G  V   G  V I+WV+R+SNGY+V SS   DG PF++ VGD+  AI G+DEGIRGMK GG RR+++PP+ AYV G +DGKPGP+PAG GPKQQ+      R+   GE +  E++LT++R
Sbjct:  186 YKKLPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 322          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A6U3UST0_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UST0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.230e-37
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 0
Query:  108 FTLLPSGVQITDIAVGDGVVVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQIN----TRK---GEPLSFEVKLTKVR 236
            +  LPSGV   D+ VG+G     G    I+WV+R+SNGY+V SS   DG PF++ VGD+  AI G+DEGIRGMK GG RR+++ P+ AYV G +DGKPGP+P G GPKQQ+      RK   GE +  E++LT++R
Sbjct:  128 YKKLPSGVIYADLRVGNGEEAVEGSRANIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKNGAIAGVDEGIRGMKVGGVRRLLIQPKYAYVTGVEDGKPGPLPVGFGPKQQMRRVMEARKDVPGEYIFLEIQLTRIR 263          
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Match: A0A7S0CE61_9STRA (Peptidylprolyl isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE61_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.360e-36
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 0
Query:  111 LPSGVQITDIAVGDGVVVEAGKGVVIKWVMRRSNGYYVSSSAEGDGEPFVYRVGDEK--RAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGCQDGKPGPIPAGLGPKQQI 218
            LPSGV   D+ +GDG VV  GK V I+W ++RSNGY + SS+  D  PF++ VG +K  RAI GLDEGIRGM+ GG RRI++PP L YVEG  DGKPGPIP G GPKQ+I
Sbjct:   34 LPSGVSYQDLRLGDGDVVSEGKRVNIQWSLKRSNGYSIDSSSNNDSVPFIFIVGAKKGQRAIAGLDEGIRGMRVGGIRRIIMPPILTYVEGLDDGKPGPIPPGFGPKQRI 143          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig953.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ9_ECTSI5.420e-9765.67Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YL48_9STRA1.890e-4758.33Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S4J203_9STRA2.540e-4256.39Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
B8C0A9_THAPS3.970e-4157.35Peptidylprolyl isomerase n=1 Tax=Thalassiosira pse... [more]
A0A1Z5JCU4_FISSO1.420e-4054.74Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S2E2F1_9STRA2.020e-3953.73Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A1Z5K3Y4_FISSO1.040e-3854.01Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S2E4F5_9STRA1.140e-3752.55Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A6U3UST0_9STRA4.230e-3750.74Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S0CE61_9STRA1.360e-3660.91Peptidylprolyl isomerase n=1 Tax=Proboscia inermis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 129..232
e-value: 2.1E-14
score: 53.6
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 131..236
score: 15.523072
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyGENE3D3.10.50.40coord: 89..236
e-value: 6.4E-25
score: 89.5
NoneNo IPR availablePANTHERPTHR43811FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPAcoord: 54..235
NoneNo IPR availablePANTHERPTHR43811:SF26PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-1, CHLOROPLASTICcoord: 54..235
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 106..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig953contigA-nodosum_M_contig953:149719..161548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig953.25.1mRNA_A-nodosum_M_contig953.25.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig953 149597..161926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig953.25.1 ID=prot_A-nodosum_M_contig953.25.1|Name=mRNA_A-nodosum_M_contig953.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=237bp
MRAQKVMTLIPCLAHAFVPHSAPFRSLADLAKPSKLLLHEHDEQVTMKLP
MSRSETLRKVAAACVGGASAWGLTATGVSAKAPVMKLPDDDASKEVQRPN
DGGAIPPFTLLPSGVQITDIAVGDGVVVEAGKGVVIKWVMRRSNGYYVSS
SAEGDGEPFVYRVGDEKRAIKGLDEGIRGMKAGGTRRIVVPPQLAYVEGC
QDGKPGPIPAGLGPKQQINTRKGEPLSFEVKLTKVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
IPR046357PPIase_dom_sf