prot_A-nodosum_M_contig951.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig951.3.1
Unique Nameprot_A-nodosum_M_contig951.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length162
Homology
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BLAST of mRNA_A-nodosum_M_contig951.3.1 vs. uniprot
Match: A0A6H5K7N3_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7N3_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.460e-45
Identity = 90/167 (53.89%), Postives = 116/167 (69.46%), Query Frame = 0 
Query:    2 SGQVIAAIVVTAVAGNILAARRLRTTMAGMGARNAQRK--EAERAFRETQEWMIRNASFSG----NPLRGRVPEGWEFNDCREAAFGEQRLNSQVLQKLSTLGVKNFVADKDEVKAAYHRRAMNLHPDR-STDSALGGGTKSANQEEFKRVASAYKWLEENYYRKDP 161
            +GQV+ AIVVTA AG+I  ARR R TM    +RNAQR+  EAE A R  ++     A+  G    +P  GR+P+GWEF+D REAAF EQRLNSQV+Q LS LGV++FVA  DEVKAAY  +AM LHPDR S DS+   G      +EF +VA++Y+WL++NY+R+ P
Sbjct:   29 TGQVLTAIVVTAAAGSIFGARRFRKTMTDTVSRNAQRRKAEAESAARAARDRAAARANAGGAADGHPFPGRIPKGWEFDDSREAAFAEQRLNSQVVQHLSALGVRSFVAGSDEVKAAYRGKAMALHPDRRSADSSKQSG------QEFMKVAASYEWLDKNYFRRRP 189
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig951.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7N3_9PHAE1.460e-4553.89J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 91..157
e-value: 2.7E-4
score: 30.3
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 96..159
e-value: 6.9E-10
score: 38.9
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 92..161
score: 12.278619
IPR001623DnaJ domainCDDcd06257DnaJcoord: 97..150
e-value: 7.22052E-10
score: 50.2365
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 83..160
e-value: 1.4E-10
score: 43.1
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 96..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig951contigA-nodosum_M_contig951:62543..67222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig951.3.1mRNA_A-nodosum_M_contig951.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig951 62500..68521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig951.3.1 ID=prot_A-nodosum_M_contig951.3.1|Name=mRNA_A-nodosum_M_contig951.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=162bp
MSGQVIAAIVVTAVAGNILAARRLRTTMAGMGARNAQRKEAERAFRETQE
WMIRNASFSGNPLRGRVPEGWEFNDCREAAFGEQRLNSQVLQKLSTLGVK
NFVADKDEVKAAYHRRAMNLHPDRSTDSALGGGTKSANQEEFKRVASAYK
WLEENYYRKDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf