prot_A-nodosum_M_contig951.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig951.2.1
Unique Nameprot_A-nodosum_M_contig951.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length211
Homology
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: D8LDD4_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD4_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 3.180e-83
Identity = 134/220 (60.91%), Postives = 162/220 (73.64%), Query Frame = 0
Query:    1 MMSRDGPLVRVSLQKPLGIQLEEIKAGLPGVRVAGLVDGGTAKENGKISARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPSVPP-----------PVSTQPAPSKEACEIRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEGTDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAVVTTKPPKR 209
            MM+++G LVRVSL KPLGIQLEE+  G PGVRVAG+V+GGTAKE+G+I A M+L+ +GG+DVT A FD VM+ L+ AP GVPIDLVFRDPS              P      P    CE+ V G        +KA+TGDNLR  LLA KV+VYD+VGK+TNCNGGGQCGTCVVQV   +GWD RS+WEA KLKGRP+SQRL+CQTV+QG+A + TKPPK+
Sbjct:   51 MMAKEGDLVRVSLPKPLGIQLEEVVPGSPGVRVAGVVEGGTAKESGEIGADMILLEIGGKDVTSAMFDLVMDTLVAAPAGVPIDLVFRDPSAAAXXXXXXXXXXXPAVAMGVP----CELTVGGV------TLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPKK 260          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A836CP36_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP36_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.630e-53
Identity = 104/206 (50.49%), Postives = 135/206 (65.53%), Query Frame = 0
Query:    8 LVRVSLQKPLGIQLEEIKAGLP-GVRVAGLVDGGTAKENGKISARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFR----DPSVPPPVSTQPAPSKEACEIRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEGTDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAVVTTKPPK 208
            +V VSL KPLGI LEE++ G P GVRV  + +GG+A ++G +   M+L+ L G D T   FD +M+ LI A    PI L F     D  +P P+ T P      CE+ V+   G  + V+KAR GDNLR VL+A KV +Y+ +  +TNCNG GQCGTCV +V G  GW  RSD+EA KLKGRPQS RLACQT+V+G+AV+T +P K
Sbjct:   40 VVDVSLPKPLGIALEELQPGKPAGVRVQEVREGGSAIKSGDVLPGMVLVSLNGIDCTTKDFDTIMDMLIGATDSQPIQLSFSLEVDDEQIPQPIKTGP------CELHVLLPKGETM-VLKARNGDNLRKVLMAGKVSIYEGLAVMTNCNGAGQCGTCVTKVVGQ-GWSPRSDYEANKLKGRPQSHRLACQTLVEGDAVITVRPAK 237          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A7S0SWM0_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWM0_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.040e-37
Identity = 83/201 (41.29%), Postives = 119/201 (59.20%), Query Frame = 0
Query:    9 VRVSLQKPLGIQLEEIKA-GLPGVRVAGLVDGGTAKENGKISARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPSVPPPVSTQPAPSKEACEIRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEGTDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAVVTTKPPK 208
            + +S+ KPLG+ LEE+++ G  G+ +   +D G AK+ GK+   +LL+   G DV  A+FD VM+ L+ AP   P+DL F DP     V   PA       I V+  D   I +V +  G NLRSVLL + +D+Y    K TNC G GQCGTCV+++     W+ RSD+E+KKLK    S RL+C T ++G+ +V  +P K
Sbjct:   36 INISINKPLGLSLEEVESDGNKGLYIED-IDEGNAKKTGKLYKGLLLISANGVDVKFASFDAVMDILVNAPIDKPLDLTFIDPRK---VEKGPA------IITVITPDKKEI-IVNSLKGQNLRSVLLGSSIDLYSSKAKFTNCAGAGQCGTCVIRLSNDIDWETRSDYESKKLKKYDTSTRLSCLTTIEGDCIVEIQPEK 225          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A7S3YA98_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA98_HETAK)

HSP 1 Score: 133 bits (334), Expect = 8.910e-35
Identity = 88/210 (41.90%), Postives = 115/210 (54.76%), Query Frame = 0
Query:   12 SLQKPLGIQLEEIKAG-LPGVRVAGLVDGGTAKENGKISARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPS----VPPPVSTQPAPSKEACE------IRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEGTDGWDD-RSDWEAKKLKGRPQSQRLACQTVVQGNAVVTTKPPKR 209
            SL KP+G+ LEE++ G   GV +  +   G+A   G+I   M L+ + G+D T  TFD+VM+ LI A   V + L    P     VP  +    AP KE  E        V+  +G    V+  + G NLR  LLAN V+VY  + K+TNCNGGGQCGTC V+V   +G    RS+WE  KL+GRP S RLAC   V G   V  KP K+
Sbjct:   55 SLAKPMGLVLEEVEEGKASGVSIVDINPDGSAGRIGEIQKGMRLLAVNGQDCTSCTFDEVMDKLIAADGEVQVTLQSSSPKQTLVVPDAIQPLEAP-KEKVEPPPEGPFEVIVLNGEEKRVLTIQAGANLRKELLANGVEVYAGMAKLTNCNGGGQCGTCAVEVVAGEGLGPARSEWEEGKLRGRPGSHRLACMNTVAGPVSVRVKPSKK 263          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A7S1XJK9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJK9_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.940e-34
Identity = 93/223 (41.70%), Postives = 125/223 (56.05%), Query Frame = 0
Query:    8 LVRVSLQKPLGIQLEEI--KAGLPGVRVAGLVDGGTAKENGKISARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPSVPPPVSTQPAPSKE-----ACEIRVVGADGG--------AIAVVKART------GDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEG-TDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAV--VTTKP 206
            +VRV L+KPLG+ LEE   +    GV V  L   G A  +G++   M L+ + G+DV  ATFD+ M+ALI AP+ V  +LV +    P P + Q  P +E     A ++    AD          A  VV   T      G+ LR+ L  +KVDVYD++GK+TNCNG GQCGTC V V G TD   +R+D E +KL  +P + RLACQ VV+G     + TKP
Sbjct:   64 VVRVQLEKPLGMVLEEAGEEGAAAGVVVVELAPDGAAARDGRVREGMALLEVAGQDVGAATFDEAMDALIGAPSVV--ELVLQG-EAPAPAAEQVEPEEEVPAAVAEDVPAPAADDAEDVDDGRPASVVVDGSTKITVERGEILRNALRGSKVDVYDLMGKVTNCNGAGQCGTCAVAVLGETDALSERTDAELRKLGKKPDNWRLACQVVVEGGGELEIQTKP 283          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A7S4BLD9_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BLD9_CHRCT)

HSP 1 Score: 115 bits (288), Expect = 3.980e-27
Identity = 79/218 (36.24%), Postives = 116/218 (53.21%), Query Frame = 0
Query:    9 VRVSLQKPLGIQLEEIKAGLPGVRVAGLVDGGTAKENGKISARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVF-------------------RDPSVPPPVSTQPAPSKEACEIRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEGTD-GWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAVVTTKP 206
            V V L KPLG+ LEE +AG  G  VA L++GG+A  +  +    +++ + G+DV+   FD++ME L  A  G  +DLV                    +   V    + +P P+     I     +GG    ++  TG  LR VL  NK ++Y ++GK+TNC G GQCGTC V ++  +     R+  E +KLKG+P S+RLACQ VVQG+  V  +P
Sbjct:  156 VSVQLPKPLGVLLEE-RAGGAGAEVASLIEGGSALSSNLVFEGDVVVSIDGKDVSSTGFDEIMEMLGDA--GEIVDLVLERQVTDTAESAAGAAETVTKSAQVDEEEAPEPMPATATIAI-----EGGQ--AIEVPTGQLLRKVLQDNKQELYSLMGKMTNCGGVGQCGTCAVDIDAKERALSPRTAAEDRKLKGKPSSRRLACQVVVQGDMFVKLQP 363          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A8J5XJU3_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJU3_DIALT)

HSP 1 Score: 113 bits (282), Expect = 5.280e-27
Identity = 87/223 (39.01%), Postives = 114/223 (51.12%), Query Frame = 0
Query:    9 VRVSLQKPLGIQLEEIK--AGLPGVRVAGLVDGGTAKENGKISARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPS------VPPPVS---------TQPA-------PSKEACEIRV-VGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEGTDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAVVTTKP 206
            V ++L KPLG+ LEE+   AG P V VA +VDGG+A  +G I   M L+ +   DV     +  M  ++ A   V + L    P+      V PP++           PA       P +    + V V   G     +    G  LR+ LL  KVDVY +VGK+TNC G GQCGTCVV + G  G   R+  E  KLKG+P S RLACQTV+ G+  V TKP
Sbjct:   50 VAIALPKPLGLVLEEVADTAGAPFVLVAEVVDGGSAASSGAIRTGMRLLSV--NDVATLELEPAMSLIVAAEGDVRLVLTSDAPAARQTAAVAPPLTPPXXXXXXRAAPAXXXXXXXPPRGPATVSVTVQQSGKPDTRLPMPQGAILRTELLKAKVDVYTMVGKMTNCGGAGQCGTCVVDISGG-GCSPRTAVEEAKLKGKPASYRLACQTVLTGDTTVATKP 269          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A7S4AQV8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQV8_9STRA)

HSP 1 Score: 112 bits (281), Expect = 5.590e-27
Identity = 76/210 (36.19%), Postives = 114/210 (54.29%), Query Frame = 0
Query:    3 SRDGPLVRVSLQKPLGIQLEEIKAG-LPGVRVAGLVDGGTAKENGKISARML---LMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPSVPPPVSTQPA-----PSKEACEIRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYD-IVGKITNCNGGGQCGTCVVQVEGTDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAVV 202
            S    L+ V+L+KPLG+ LEE++ G   GV V  L + G+A  + +   R++   L  + G DVTG  FD VM+ LI AP+ + +D      S     S  P      P      I+V+  +G    +V+ + GDNLR+ LL NK++VY  +  K+ NC GGGQC  C      ++GW +RS++E ++L   PQ+ RL C   +QG A +
Sbjct:   47 SLQSSLLSVTLEKPLGVILEEVEQGQAKGVFVLELAEDGSAAAS-EFKDRLVGLPLANVMGNDVTGMDFDSVMDQLIAAPSPITLDFKVATASEASGESESPLEDDLLPIGTIVAIKVLDNNGNPETIVEGKVGDNLRATLLENKIEVYKGLKQKLGNCGGGGQCTFCAANFIESEGWSERSEYEDQRLAKAPQA-RLTCLNNIQGPATI 254          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A1E7EPR9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPR9_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.800e-25
Identity = 77/196 (39.29%), Postives = 109/196 (55.61%), Query Frame = 0
Query:   11 VSLQKPLGIQLEEIKAGLP-GVRVAGL-VDGGTAKENGKIS-ARMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPSVPPPVSTQPAPSKEACEIRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYD-IVGKITNCNGGGQCGTCVVQVEGTDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNAVV 202
            VSL+KPLG+ LEE++ G P GV V+ L  DG  A    K     M L  + G++V    FD +M+ LI AP+  PI + F+ P    PV   P  +     IRV+G   G   V++ + GDNLR+ LL N ++VY  +  K+ NC GGGQCG C      ++GW+ R+++E KK    P + RL C   +QG A +
Sbjct:   57 VSLEKPLGLILEEVEEGQPSGVYVSELGEDGSAAASQWKDQLVGMRLTSVMGQNVEHLGFDAIMDQLIAAPS--PISIEFKAP----PVDLFPVGT--IVSIRVLGDKDGEETVIEGKVGDNLRTTLLDNNIEVYKGMKQKLGNCGGGGQCGFCAADFIDSEGWEPRNEYEDKKFPKAPNA-RLTCFNNIQGPATI 243          
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Match: A0A4D9D0U6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0U6_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.050e-25
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 0
Query:  109 IRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITNCNGGGQCGTCVVQVEGTDGWDDRSDWEAKK-LKGRP----QSQRLACQTVVQ-GNAVVTTKPPKR 209
            + V+G DG  + V++A+ G NLR  L A+K+DVYD++GK+TNCNG GQCGTCVV+V  +  W  RS++EA K LKG+     Q  RLACQT V+ G A V  +PPK+
Sbjct:   75 VTVLGPDGAQLKVIEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVT-SPSWGLRSEYEADKILKGKKIGEGQEYRLACQTTVERGEATVVVRPPKK 180          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig951.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDD4_ECTSI3.180e-8360.91PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CP36_9STRA4.630e-5350.492Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S0SWM0_9STRA1.040e-3741.29Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3YA98_HETAK8.910e-3541.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XJK9_9STRA5.940e-3441.70Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4BLD9_CHRCT3.980e-2736.24Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A8J5XJU3_DIALT5.280e-2739.01Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S4AQV8_9STRA5.590e-2736.19Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7EPR9_9STRA1.800e-2539.29Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A4D9D0U6_9STRA6.050e-2552.342Fe-2S ferredoxin-type domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 15..91
e-value: 4.8E-4
score: 29.4
IPR001478PDZ domainPROSITEPS50106PDZcoord: 1..89
score: 9.1293
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 8..108
e-value: 2.0E-8
score: 36.2
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 15..101
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 149..196
e-value: 1.1E-8
score: 34.8
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 107..208
score: 8.68343
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 109..203
e-value: 4.25609E-10
score: 52.3972
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 109..210
e-value: 7.2E-15
score: 56.7
NoneNo IPR availablePANTHERPTHR23426:SF34FERREDOXIN-2, MITOCHONDRIALcoord: 97..198
IPR001055AdrenodoxinPANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 97..198
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 121..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig951contigA-nodosum_M_contig951:40228..54666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig951.2.1mRNA_A-nodosum_M_contig951.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig951 40052..54675 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig951.2.1 ID=prot_A-nodosum_M_contig951.2.1|Name=mRNA_A-nodosum_M_contig951.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=211bp
MMSRDGPLVRVSLQKPLGIQLEEIKAGLPGVRVAGLVDGGTAKENGKISA
RMLLMGLGGRDVTGATFDDVMEALITAPTGVPIDLVFRDPSVPPPVSTQP
APSKEACEIRVVGADGGAIAVVKARTGDNLRSVLLANKVDVYDIVGKITN
CNGGGQCGTCVVQVEGTDGWDDRSDWEAKKLKGRPQSQRLACQTVVQGNA
VVTTKPPKRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR001055Adrenodoxin
IPR0360102Fe-2S_ferredoxin-like_sf