prot_A-nodosum_M_contig95.30.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig95.30.2
Unique Nameprot_A-nodosum_M_contig95.30.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length549
Homology
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: D7FZ47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ47_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.430e-17
Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = 0
Query:   15 KKHRCWTFLVGGVKRNGIVSGNEARIFAAFRAKYTAAKRLAIS-ANRDKRRAGGAKGNGKASKTLSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKKKYLRVPTAA 128
            +K RCW F V GV  N     +E  + A+ R +YT  KRL +  A   K     A G+    + + VEVQFTGPQPSEGPG LL DLL G SV+A+PV L RGRKK+     TA+
Sbjct:   40 RKQRCWLFQVDGVTSNA----SEVELLASIRERYTTVKRLVVRPAATSKDAVAAADGS---PRNVVVEVQFTGPQPSEGPGALLCDLLCGVSVDAKPVELPRGRKKRARTDATAS 147          
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: A0A6H5K0L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L1_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 9.360e-17
Identity = 119/487 (24.44%), Postives = 195/487 (40.04%), Query Frame = 0
Query:   76 KTLSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKKKYLRVPTAAK-------AIVSVDEPKTNGGIDAT----------RREASILDTVGDNKC----------NKGDVGVTTPNEVDATTHGGLALPAW-----HRSGIEAPATRESKCDRPVMAVSQPHVGLTEAVDQTSSALTLGPES-LRQLDDVWSFFETPPASPRDCVNQTMTVDG------SAYDLPTITDDEKDDCGFPWRRSLSSSGSADYDPLSDASELLRTAWMLDSNYGSEDSNIYGESWTQSSFTFDQNAASPMDSGQVAGVEDSGVDSQDDSELNGDERYPEVELLHKVCDFEGRPSLD-----------GGSCAPMATEPAPRGGQSHLLLKGIKAAGRGCEMPSIFAFFSAGPLHKAGRII--SPEKVEDD-----GVIQAAVLYPSMELLWPDVYAAKNVQEVEVDVAVDLRWGDEEINCAGPSLKITYRR 505
            + + ++V+F+GPQP +GP  L+  LLSGSSV A PV L RGR++K  R   A+        A+    +P+ N  +++              A+++   G+               G  G   P    A +     L  W     H  G + P  R S  D   M+ S    G + +    S       ++ +   +     F+    +  +C    +  DG       A  +    D + +   FP R      G      ++  S  +         +   +S ++  +   S  + D  AA+     +    E    DS+ ++     E      LL + CDF+GR +              G CA  +T+   R     L  KGI+    G    ++ A FS GP    G ++  +P  +E D     G     + YPSME +WP+VY+A++V+ VEVD+ VD+R  D +   + PS+K+ YRR
Sbjct:   99 RKVCIQVEFSGPQPIKGPAELMCSLLSGSSVSALPVFLARGRRRKKSRTSCASDERAEEEAAVTDHVDPRINTLVESALGRNDNCGDGEAHATVMTVEGEETAAXXXXXXXXXXSGAAGQKPPLRPPAFSVAADDLIKWNDLIPHLDG-DTPHRRRSTQDLSSMSPSSSVGGFSSSATLLSDCDEYSCDANMSSRESAAQLFKDADKAIAECYFGPVDTDGMLDLAGEASPVDFDADVKSELFEFPSRVDEGDDGGDVNASINSCSTKIEQNPASTPVHTKSESPVFDVAGQASPASADSAAANQGKEEEEESWE--WFDSEGNAR-GSQEGNVAFGLLRQECDFDGRSAAAVPAASATSASANGVCASSSTKKPCR-----LRFKGIEGVDYGIRDLAVTAQFSVGP---PGNLVGTAPTNLEADRNACAGSSSCTITYPSMEDIWPEVYSARSVKVVEVDMTVDVRSSDGKWVHSWPSVKVMYRR 573          
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.890e-10
Identity = 49/119 (41.18%), Postives = 64/119 (53.78%), Query Frame = 0
Query:   12 PSIKKHRCWTFLVGGVKRNGIVSGNEARIFAAFRAKYTAAKRLAISANRDKRRAGGAKGNGKASKT-----------LSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKK 119
            P  +K R W F + G+  + +    E  +F A R +YT  KRLA+        + GA+   K++             + VE+QF GPQPSEG G LL  LL G+SVEARPV L RGRKK
Sbjct:   22 PVRRKQRGWVFKIDGIANHEMT---EEDLFFAVRERYTTVKRLALKNASPGPASEGAEPASKSTHDRVGFQAAVAGGVLVEIQFAGPQPSEGCGALLCHLLRGTSVEARPVELPRGRKK 137          
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 5.800e-9
Identity = 45/132 (34.09%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   15 KKHRCWTFLVGGVKRNGIVSGNEARIFAAFRAKYTAAKRLAI-------------------SANRDKRRAGGAKGNGKASKTLSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKKKYLRVPTA 127
            +K RCW F V GV  +   +  EA + A F   YTA   L +                     +R     G ++ +   ++++ VEV+F+GPQP++ P LLLR LL G SV A PV+L RGR+ K ++   A
Sbjct:   22 RKQRCWQFHVSGVSISDTKAQQEAAL-ATFTDTYTATTWLTVRPATPRGPVGRRKKYGTLDETDRKTTEKGDSESSSSGTRSVVVEVRFSGPQPADRPALLLRSLLKGESVAAHPVSLRRGRQTKSMKAAAA 152          
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: A0A6H5JSU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU0_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 4.270e-8
Identity = 37/72 (51.39%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   78 LSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKKKYLRVPTAAKAIVSVDEPKTNGGIDATRRE 149
            + VE+QF GPQPSEG G LL +LL GSSVEAR V L RGRKKK     T       + E    GG+    RE
Sbjct:   48 MLVEIQFAGPQPSEGCGALLCNLLRGSSVEARAVELPRGRKKKIATSVTPENGNNDIFE----GGVHTHERE 115          
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.270e-7
Identity = 51/150 (34.00%), Postives = 70/150 (46.67%), Query Frame = 0
Query:    1 MSLSRSRRPQGPSIKKHRCWTFLVGGVKRNGIVSGNEARIFAAFRAKYTAAKRLAISANRDKRRAGGAKG------------------------------NGKASKTLSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKKK 120
            M+++    P  PS KK RCW  LV  V+ N      EA + ++FR +YT+ ++LA     D   AGG+                                 G+A     +E+QFTGPQP EGP  L+ +LL  + V A PV L RGRK+K
Sbjct:    1 MAVAAIMPPSMPSSKK-RCWNLLVKDVRNNA----QEAEVLSSFRKRYTSTRKLAFRPVADY--AGGSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXITQGGRA----CIEIQFTGPQPIEGPAGLMCNLLQATFVSAHPVQLDRGRKRK 139          
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: A0A6H5JYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP1_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.410e-7
Identity = 49/130 (37.69%), Postives = 64/130 (49.23%), Query Frame = 0
Query:    9 PQGPSIKKHRCWTFLVGGVKRNGIVSGNEARIFAAFRAKYTAAKRLAISANRDKRRAGGAKG------------------NGKASKTLSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKKK 120
            P  PS KK RCW  LV  V+ +      E  + ++FR +YT+ ++LA     D   AGG+                     G+A     +E+QFTGPQP EGP  LL  LL  + V A PV L RGRK+K
Sbjct:    9 PSMPSSKK-RCWNLLVKDVRNHA----QEDEVLSSFRKRYTSTRKLAFRPVADY--AGGSTXXXXXXXXXXXXXXXXITHGGRA----CIEIQFTGPQPIEGPAGLLCSLLEATFVSAHPVQLDRGRKRK 127          
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Match: A0A6H5JPU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU4_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 7.380e-5
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   66 GGAKGNGKASKTLSVEVQFTGPQPSEGPGLLLRDLLSGSSVEARPVNLGRGRKKKYLR 123
            G ++ N   ++++ VEV+F+GPQP++ P LLLR LL G SV   PV+L RGR+ K ++
Sbjct:   52 GDSESNSSDTRSVVVEVRFSGPQPADRPALLLRSLLKGESVVVHPVSLRRGRQPKSMK 109          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig95.30.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FZ47_ECTSI2.430e-1747.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0L1_9PHAE9.360e-1724.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDQ6_9PHAE2.890e-1041.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCJ7_ECTSI5.800e-934.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSU0_9PHAE4.270e-851.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK7_ECTSI1.270e-734.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYP1_9PHAE1.410e-737.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPU4_9PHAE7.380e-546.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..367

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig95contigA-nodosum_M_contig95:517757..524578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig95.30.2mRNA_A-nodosum_M_contig95.30.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig95 515775..595824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig95.30.2 ID=prot_A-nodosum_M_contig95.30.2|Name=mRNA_A-nodosum_M_contig95.30.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=549bp
MSLSRSRRPQGPSIKKHRCWTFLVGGVKRNGIVSGNEARIFAAFRAKYTA
AKRLAISANRDKRRAGGAKGNGKASKTLSVEVQFTGPQPSEGPGLLLRDL
LSGSSVEARPVNLGRGRKKKYLRVPTAAKAIVSVDEPKTNGGIDATRREA
SILDTVGDNKCNKGDVGVTTPNEVDATTHGGLALPAWHRSGIEAPATRES
KCDRPVMAVSQPHVGLTEAVDQTSSALTLGPESLRQLDDVWSFFETPPAS
PRDCVNQTMTVDGSAYDLPTITDDEKDDCGFPWRRSLSSSGSADYDPLSD
ASELLRTAWMLDSNYGSEDSNIYGESWTQSSFTFDQNAASPMDSGQVAGV
EDSGVDSQDDSELNGDERYPEVELLHKVCDFEGRPSLDGGSCAPMATEPA
PRGGQSHLLLKGIKAAGRGCEMPSIFAFFSAGPLHKAGRIISPEKVEDDG
VIQAAVLYPSMELLWPDVYAAKNVQEVEVDVAVDLRWGDEEINCAGPSLK
ITYRRPPVQATEAAAASTVVCRRMSPTPNDVAAEGDTMRDDYYGDFLL*
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