prot_A-nodosum_M_contig9491.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9491.1.1
Unique Nameprot_A-nodosum_M_contig9491.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length147
Homology
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 1.000e-64
Identity = 110/139 (79.14%), Postives = 123/139 (88.49%), Query Frame = 0
Query:    1 MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLKTLAAASE 139
            +D IDTSRYDLQPPQGAAAEDE AWKRAL+N RAQTEHQHNRLLNLELLQNYGASMWLG NKAEEGTEAA+A+Q K   EEAE+VN++RK SQE AE+ L NLA+KR+EGFDKNVQIQ+ACE LRAEVKRLK L A ++
Sbjct:   84 LDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEAVAK 222          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.670e-23
Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 0
Query:    1 MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLK 132
            M  +D +RY+++ P GA AED GAW+ A+ N +AQ  HQ+NR LNLELL NYGA+ WL  NKA  G E+ + A  K   +EA+ +N +R+ +Q    + L +L ++R E  DKN+QI +A   L+ ++K+ K
Sbjct:   75 MAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYK 206          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: W7TEH7_9STRA (Breast carcinoma amplified sequence 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEH7_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.700e-21
Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 0
Query:    1 MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLKT 133
            M P+D SRY  + P      D  AW+ ALNN+RAQ EH  NR++N+ELLQN+   +WL  N+  E  +  +  + +   +EAE +N+ RK  QE+    L NL +KR E    N+++Q AC  LR E+KRL+T
Sbjct:   92 MAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAELINLSRKTKQEEVAPRLSNLTRKRDETLYTNLELQKACAMLRMEIKRLRT 224          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.620e-19
Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 0
Query:    1 MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLKT 133
            M P+D SRY  + P      D  AW+ ALNN+RAQ EH  NR++N+ELLQN+   +WL  N+  E  +  +  + +   +EAE +N+ RK  QE+    L NL +KR E    N+++Q AC  LR E+KRL+T
Sbjct:   76 MAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAECINLSRKTKQEEVAPRLSNLTRKRDEILYTNLELQKACAMLRMEIKRLRT 208          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A0A507FG75_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FG75_9FUNG)

HSP 1 Score: 84.7 bits (208), Expect = 1.310e-17
Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 0
Query:    4 IDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLKTLA 135
            IDTSR+ L+PPQ +    E AWK A++N  AQ EHQ NRLLNLELL  YGA+ W   N   E     + A+ +E      +VN  RK+ Q  A   L+ L ++  +  D+ ++I +A + L+AE+  L+  A
Sbjct:   66 IDTSRFRLEPPQASEKHSEAAWKLAVDNAHAQLEHQQNRLLNLELLNAYGANAWRVSNFQVEAAVKLVTAEVEERKAAILEVNKERKIEQTKAGTELQALEQRWRDLVDQCLRIDIANQVLQAEIDELRATA 197          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: F0Z9L4_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z9L4_DICPU)

HSP 1 Score: 81.6 bits (200), Expect = 2.900e-16
Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 0
Query:    1 MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLK 132
            MD  D +RY +  P GA  ++E  W  +LNN R+Q EHQ  R +NLELLQ YGA+ W       E  +  +  Q ++   E E+VN++RK+ QED    +R    K      KN +I++AC++++ E+ +LK
Sbjct:   76 MDEFDINRYKVTSPTGANIKNEKIWNESLNNARSQLEHQDIRKINLELLQRYGANSWKLYLSDLELLQKILKKQLEQKKAEIEEVNIQRKIKQEDTIEKIRQHENKWLNLVYKNKEIELACQSVQREIDQLK 207          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A0A1X2H345_SYNRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H345_SYNRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.120e-16
Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    1 MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRL 131
            ++ +DT RY L  P     +D  AW+ A+NN +AQ E + NRL+NLELLQ YGA+ W   N   E     I A  ++   +  Q+N  RKM Q  A  +LR+L  K ++   +N+Q+ +AC  L  EV+ L
Sbjct:   41 LEALDTERYQLSAP---GEDDPEAWQAAVNNSKAQLEAESNRLINLELLQKYGANAWRVHNYMLEAHLKRIQAANEDMKNKILQINRERKMDQTQAAGSLRSLEDKWSDLVSQNLQVDIACTALEQEVEEL 168          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A9SH09_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SH09_PHYPA)

HSP 1 Score: 79.3 bits (194), Expect = 3.650e-15
Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 0
Query:    4 IDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLK 132
            +D SRY L+PP      D GAWK A+ N +AQ +HQ  RL NLEL+ NYG + W+  N+  E  +A +     E   E E +N  RK++Q+ A   L  L+ +  E   KN+ I+ AC  L AEV +L+
Sbjct:  103 LDLSRYGLEPPPVNKRNDVGAWKSAVQNAKAQLQHQTLRLENLELMLNYGTTAWIVHNQHLEAFQARLRDTALEYQREIEILNRERKLNQQAAAVELNLLSSQWKEISQKNLDIEEACLKLEAEVLKLR 231          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A0A1C7N7I1_9FUNG (Pre-mRNA-splicing factor SPF27 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N7I1_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 2.210e-14
Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 0
Query:    1 MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLK 132
            +D +DT RY+LQ P+     D   WK A+NN ++Q E Q   + NLELLQ YGA+ W   N   E     I    ++  ++  +VN  RK  Q  A  +L++L  K ++   +N+Q+++AC  L AEV+ L+
Sbjct:   80 LDVLDTKRYELQGPEDE--NDIEGWKAAVNNTKSQLESQAGSMFNLELLQKYGANAWRVHNYQLEADLKTIQRNTEQVRQQILEVNRERKQDQTQAAASLQSLENKWSDLISQNLQVEIACAALEAEVQELR 209          
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Match: A0A2P6MMT5_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MMT5_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 6.960e-14
Identity = 46/129 (35.66%), Postives = 74/129 (57.36%), Query Frame = 0
Query:    4 IDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQNYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERALRNLAKKRTEGFDKNVQIQVACETLRAEVKRLK 132
            +D SRY+L PP  +   D+ AW+RAL+N ++Q EHQ  RLLNLEL+  YGA+ ++  NK  E  +  +  + +   ++ E +++ R+  Q      LR L  KR +   KN+ ++  C  L  E++ LK
Sbjct:   77 LDVSRYELLPPSESKQNDKEAWERALHNAQSQLEHQSLRLLNLELMNKYGANAYIVYNKYLEDIQKRLQNEVQGMQKQIEDMSLERRNEQVFCGENLRTLESKRVDLIYKNLDLEEICRGLEEEIEALK 205          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9491.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2U2_9PHAE1.000e-6479.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMV2_9STRA2.670e-2343.94Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema m... [more]
W7TEH7_9STRA3.700e-2142.11Breast carcinoma amplified sequence 2 n=1 Tax=Nann... [more]
A0A4D9DBM6_9STRA1.620e-1942.11Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A507FG75_9FUNG1.310e-1740.15Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
F0Z9L4_DICPU2.900e-1637.88Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A1X2H345_SYNRA5.120e-1638.93Pre-mRNA-splicing factor SPF27 n=1 Tax=Syncephalas... [more]
A9SH09_PHYPA3.650e-1540.31Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1C7N7I1_9FUNG2.210e-1436.36Pre-mRNA-splicing factor SPF27 n=1 Tax=Choanephora... [more]
A0A2P6MMT5_9EUKA6.960e-1435.66Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008409Pre-mRNA-splicing factor SPF27PFAMPF05700BCAS2coord: 1..135
e-value: 7.3E-34
score: 117.2
IPR008409Pre-mRNA-splicing factor SPF27PANTHERPTHR13296BCAS2 PROTEINcoord: 1..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR13296:SF0PRE-MRNA-SPLICING FACTOR SPF27coord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9491contigA-nodosum_M_contig9491:3043..9973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9491.1.1mRNA_A-nodosum_M_contig9491.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9491 2912..9973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9491.1.1 ID=prot_A-nodosum_M_contig9491.1.1|Name=mRNA_A-nodosum_M_contig9491.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=147bp
MDPIDTSRYDLQPPQGAAAEDEGAWKRALNNIRAQTEHQHNRLLNLELLQ
NYGASMWLGDNKAEEGTEAAIAAQEKEDPEEAEQVNVRRKMSQEDAERAL
RNLAKKRTEGFDKNVQIQVACETLRAEVKRLKTLAAASEASKRTSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008409SPF27