prot_A-nodosum_M_contig946.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig946.2.1
Unique Nameprot_A-nodosum_M_contig946.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length228
Homology
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: A0A6H5KW76_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW76_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.290e-50
Identity = 95/152 (62.50%), Postives = 115/152 (75.66%), Query Frame = 0
Query:    7 SFQETQATKGQAPLEGADGTIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGES--GLHKP-PLLYGILHAL-RRREEASSTGG 154
            S  + Q ++G+ PLEG DGTIDDLK AL+ENLE+RGVL KL+A+VRAE+  TLEGPQ GV    L N+NLLINELVRDYL YNGY NAL VF+ ESGQP    L+R FI+++LGL+E+R  +  G  +P PLLYGI HAL RRR+EAS   G
Sbjct:    3 SHTDQQRSQGE-PLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENLLINELVRDYLSYNGYSNALGVFMAESGQPIERSLDRGFIRDELGLSERRDSTDHGSARPLPLLYGITHALKRRRKEASGNNG 153          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: D7FVJ9_ECTSI (Similar to chemokine (C-C motif) receptor 6a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ9_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 9.540e-49
Identity = 93/149 (62.42%), Postives = 109/149 (73.15%), Query Frame = 0
Query:   10 ETQATKGQAPLEGADGTIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGE---SGLHKPPLLYGILHAL-RRREEASSTGG 154
            E Q ++G+ PLEG DGTIDDLK AL+ENLE+RGVL KL+A+VRAE+  TLEGPQ  V    L NDNLLINELVRDYL YNGY NAL VF+ ESGQP    L+R FI+++LGL+E+       G    PLLYGI HAL RRR+EAS   G
Sbjct:    6 EQQRSQGE-PLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQERVLPTPLSNDNLLINELVRDYLSYNGYANALGVFMAESGQPIERSLDRGFIRDELGLSERLDSIDRGGARPLPLLYGITHALKRRRKEASVNNG 153          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: A0A835YQT6_9STRA (LisH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT6_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.190e-33
Identity = 69/132 (52.27%), Postives = 96/132 (72.73%), Query Frame = 0
Query:   18 APL--EGADGTIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGV--SFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRR 145
            APL  EGA GT+DDLK AL++ LE+ G L KL+A+VRAE+ ++LE  +     + P L N NL+INEL+RDY EYNGY +ALSVF+ ES QP +  L+R FI+++LG++E+   +   + PLLYGILH L++
Sbjct:   13 APLQQEGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQK 144          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: A0A7S1Q0J4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q0J4_ALECA)

HSP 1 Score: 112 bits (279), Expect = 1.510e-27
Identity = 63/147 (42.86%), Postives = 91/147 (61.90%), Query Frame = 0
Query:   15 KGQAPLEGADGTIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRRREEA-----SSTGGPG 156
            +G A       T+D+LK AL+E L+ RGVL ++KA+VRAEI   L+  Q+    P L  +N++INEL+R+YLEYNGY++ALSV + ESG P   + +R F+  +L + E      L   PL+YG++  LR R +A     S+ G PG
Sbjct:   14 RGYAIRNAMSATLDELKQALVETLDQRGVLGQVKAKVRAEIFAALDDEQA--PRPELPRENVVINELIREYLEYNGYLHALSVLLPESGHPQERQFDRQFLAAELQVQEDERSRSL---PLIYGLVRGLRPRSDALDPAGSAGGAPG 155          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: A0A024GKL4_9STRA (LisH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKL4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 6.180e-27
Identity = 58/128 (45.31%), Postives = 84/128 (65.62%), Query Frame = 0
Query:   26 TIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRRREEASSTG 153
            ++ +LK  L E LE RG L ++KA++RAEI   L+     +  P L N+NL++NEL+R+YLEYNGY +ALSVF+ ESGQPT     R F+  +LG+ E   ++   + PLLY IL  L++R E ++ G
Sbjct:    7 SLSELKEVLKETLETRGCLGQIKARIRAEIFSALD--DQSIPKPELSNENLILNELIREYLEYNGYRHALSVFLPESGQPTEKAFPRSFLSSELGVRE---DARFTQIPLLYNILFILQQRRENNAKG 129          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: A0A267H407_9PLAT (LisH domain-containing protein (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H407_9PLAT)

HSP 1 Score: 109 bits (272), Expect = 1.450e-26
Identity = 69/142 (48.59%), Postives = 89/142 (62.68%), Query Frame = 0
Query:   26 TIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQ-SGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRRREEASSTGGPG------EHDR 160
            ++D+LK AL ENLE+RGVL+ ++A +RAEI R+LE P+ SG   P L N+NLLINEL+R+YLE+N Y NA SV   ESGQP    L+R  +  +L L E     G+   PLLY +L     R  AS  GG G      +HDR
Sbjct:   11 SVDELKSALKENLESRGVLQDIRASLRAEIYRSLEEPRPSGQQRPGLSNENLLINELIREYLEFNEYSNAASVLAAESGQPQA-RLSRSLLSRELNLREDPSCQGM---PLLYSMLAYYMNRGVAS--GGRGVRFGQQQHDR 146          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: F0WR59_9STRA (PREDICTED: similar to predicted protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WR59_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.260e-26
Identity = 58/128 (45.31%), Postives = 83/128 (64.84%), Query Frame = 0
Query:   26 TIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRRREEASSTG 153
            ++ +LK  L + LE+RG L ++KA++RAEI   L+     +  P L N+NL++NEL+R+YLEYNGY +ALSVF+ ESGQP      R FI  +LG+   R ++   + PLLY IL  L++R E S  G
Sbjct:    8 SLSELKEVLKDTLESRGALGQIKARIRAEIFSALD--DQSIPKPELSNENLILNELIREYLEYNGYRHALSVFLPESGQPLEKPFPRSFISSELGV---RDDAQFTQVPLLYNILLILQQRREKSLKG 130          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: W2LRN2_PHYPR (LisH domain-containing protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LRN2_PHYPR)

HSP 1 Score: 107 bits (268), Expect = 1.280e-25
Identity = 72/201 (35.82%), Postives = 104/201 (51.74%), Query Frame = 0
Query:   21 EGADGTIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRRREEASSTGGPGEHDRGDRVVGTRIDWRGAPAYEDDIAAEDCESMRTPWTGVDLGVGDTGTLGTLGRENPAPIHFTK 221
            +G   T+ DLK  L + L  RG L ++KA++RAEI   L+     V  P L N+NL+INEL+R+Y EYNGY +ALSVF+ ESGQP     +R F+  +L +TE   +      PLLY I+ +L+++          + +R D  V  +ID   A    DD      +  +T  T VD            G + P+P+ F K
Sbjct:    6 DGGQATLSDLKEVLKDTLAARGSLDQIKARIRAEIFAALD--DQDVPKPKLSNENLIINELIREYFEYNGYRHALSVFLPESGQPAEKPFDRQFLSNELNVTE---DPRFTHVPLLYSIVASLQQKRNQEQ-----QRER-DLDVEHQIDQFAAMPTHDDHERRSFDEDQTHQTRVD------------GTKEPSPVIFRK 183          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: A0A1V9YC06_9STRA (LisH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC06_9STRA)

HSP 1 Score: 106 bits (265), Expect = 5.520e-25
Identity = 58/118 (49.15%), Postives = 79/118 (66.95%), Query Frame = 0
Query:   26 TIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHAL 143
            ++ DLK AL E LE RG L  +KA++RAEI + L+    G + P L N+NL+INEL+R+YLEYNGY + LSVF+ ESGQP      R F+  +L +TE   +   ++ PLLYGI+ AL
Sbjct:    6 SLADLKDALKETLEARGTLGPIKARLRAEIFQALD---EGATKPKLSNENLIINELIREYLEYNGYRHTLSVFLPESGQPQERPFQRRFLAHELNITE---DPRYNQVPLLYGIVTAL 117          
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Match: A0A3P3Y7H4_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y7H4_PLABS)

HSP 1 Score: 110 bits (275), Expect = 3.230e-24
Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    5 RQSFQETQATKGQAPLEGADGTIDDLKLALLENLENRGVLRKLKAQVRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVVESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRRREEASSTGGPGEHDRGDRVVGTRIDWRG 173
            RQS ++T+    +  ++    T+DDLK  L E LE RGVL +L+A++RAEI   LE  +     P L N+N+++NEL+R+YLE+NGY N LSVF+ E+GQPT       F+++ L +  Q   SG H+ PLLY I+  L              HDR D +    +D  G
Sbjct:  468 RQSIRQTR----RIAMDVTMATLDDLKAVLRETLETRGVLSQLQARIRAEIFNALEDQEP--DRPRLSNENMIVNELIREYLEFNGYQNTLSVFMPETGQPTPAPFEAPFLEQHLHIRPQ--PSGQHRLPLLYRIVKQLNEGRT---------HDRADAIKIAPVDIAG 619          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig946.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW76_9PHAE2.290e-5062.50LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FVJ9_ECTSI9.540e-4962.42Similar to chemokine (C-C motif) receptor 6a n=1 T... [more]
A0A835YQT6_9STRA2.190e-3352.27LisH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1Q0J4_ALECA1.510e-2742.86Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A024GKL4_9STRA6.180e-2745.31LisH domain-containing protein n=1 Tax=Albugo cand... [more]
A0A267H407_9PLAT1.450e-2648.59LisH domain-containing protein (Fragment) n=3 Tax=... [more]
F0WR59_9STRA3.260e-2645.31PREDICTED: similar to predicted protein putative n... [more]
W2LRN2_PHYPR1.280e-2535.82LisH domain-containing protein n=9 Tax=Phytophthor... [more]
A0A1V9YC06_9STRA5.520e-2549.15LisH domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A3P3Y7H4_PLABS3.230e-2439.64Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.960.40coord: 71..142
e-value: 7.9E-10
score: 40.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR15431:SF4LISH DOMAIN-CONTAINING PROTEIN FOPNLcoord: 29..147
NoneNo IPR availablePANTHERPTHR15431FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEINcoord: 29..147
IPR018993FGFR1 oncogene partner (FOP), N-terminal dimerisation domainPFAMPF09398FOP_dimercoord: 74..140
e-value: 3.3E-8
score: 33.7
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 74..106
score: 8.177343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig946contigA-nodosum_M_contig946:248566..269518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig946.2.1mRNA_A-nodosum_M_contig946.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig946 248084..269746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig946.2.1 ID=prot_A-nodosum_M_contig946.2.1|Name=mRNA_A-nodosum_M_contig946.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=228bp
MATTRQSFQETQATKGQAPLEGADGTIDDLKLALLENLENRGVLRKLKAQ
VRAEIIRTLEGPQSGVSFPTLCNDNLLINELVRDYLEYNGYINALSVFVV
ESGQPTNNELNRDFIKEQLGLTEQRGESGLHKPPLLYGILHALRRREEAS
STGGPGEHDRGDRVVGTRIDWRGAPAYEDDIAAEDCESMRTPWTGVDLGV
GDTGTLGTLGRENPAPIHFTKNGSANK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018993FOP_dimerisation-dom_N
IPR006594LisH