prot_A-nodosum_M_contig945.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig945.10.1
Unique Nameprot_A-nodosum_M_contig945.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length858
Homology
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BLAST of mRNA_A-nodosum_M_contig945.10.1 vs. uniprot
Match: D7G395_ECTSI (Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G395_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 4.940e-17
Identity = 61/116 (52.59%), Postives = 73/116 (62.93%), Query Frame = 0 
Query:  612 SCVEKIVAWSLIVSPGTSTTTPFPWNSNLSQISSNTRDYLAKMHSDLDFVKESLGSDAQSFGRGNPLLLTSSEAS----AGFIGDSYLCKLSLATHVVLDAVKFARENADEPSAAD 723
            SCVEKIVAWSL+VSP +    PF W+S          DYLAKMH DLDFV ++L  DA +FG+GNPLLLT SEA+    AG +G  Y      AT+V+LDAV  AR+ A    A D
Sbjct:  286 SCVEKIVAWSLVVSPESCRPKPFRWSSE---------DYLAKMHHDLDFVSDALAKDAPAFGKGNPLLLTRSEAAGQPRAGQVGRYYA-----ATYVILDAVNRARDAATAAQAGD 387
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BLAST of mRNA_A-nodosum_M_contig945.10.1 vs. uniprot
Match: A0A7S2RLZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLZ0_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.010e-10
Identity = 53/123 (43.09%), Postives = 69/123 (56.10%), Query Frame = 0 
Query:  591 RRENAARLLKCLARALRKAGLSCVEKIVAWSLIVSPGTSTTTPFPWNSNLSQISSNTRDYLAKMHSDLDFVKESLGSDAQSFG---RGNPLLLTSSEASAGFIGDSYLCKLSLATHVVLDAVK 710
            R   AARLL  L+  LR+AGL+CVEKIVAW+L    G      F WN +         DYL KM  DLDF+ + +G DA   G   RGNPLLL++ E   G    S + +L  A+ V+LD ++
Sbjct:   39 RTAEAARLLTNLSSQLRQAGLTCVEKIVAWALEAMAGNGDPPSFLWNGS---------DYLLKMVGDLDFICDQIGKDAWRMGHFCRGNPLLLSADELK-GRGPRSRINRLQAASMVLLDVMR 151
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig945.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G395_ECTSI4.940e-1752.59Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7S2RLZ0_9STRA4.010e-1043.09Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..576
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..763
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 814..828
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..837
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig945contigA-nodosum_M_contig945:140434..146153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig945.10.1mRNA_A-nodosum_M_contig945.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig945 140365..146153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig945.10.1 ID=prot_A-nodosum_M_contig945.10.1|Name=mRNA_A-nodosum_M_contig945.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=858bp
MPRPSMRRRPPSLVKAARLGKNAPPEWYLRRREDGWNSRFSIDGPSHLDV
PIDGDPMDSERLLESASRTSRDDARSDGSCGKTLREGDDGGRPGPERGTR
KRVRIRNIMGRLPLDSEFHKIHRMDKLDSDREHEEMEKGARPGRRPRVAH
ASGQSLHPSKPIDTFSGQAVQSRGPCRTHPSAPLHPQNTNYAPPGQADSA
LPRHIRFETGVGERVRFHSGEDLSERYTRDAPDTVSPVFDVAEGESHPKA
PGVKEKSGLGNSAVRVRSTVDCEAAAGNKVGKVNAGAVQEARRAAVGACM
HREKLLARLRTLVNDWPPKETGIKSGTIKGFQPLMGSGRVFRGKQAGRDK
QPTKRGFKKKHASHEHAKTVSESLDGASESTRNESESTKNASESTKTVSE
STKKTPRSKKQNICSSSEVEYKSPRNRKATNDHAASSSKNLDVHRGRPWK
GSVSMATVKAYGGSASMAANAFYFWAPSVSGSTETASAGAHGSKHSGFSR
SPPASPATESTKIVPDSTKNASESTKKKEKKVVSPKAAFKAPVYEQQADG
DNNAASSSKHPAATGGRPQKGSMEEAVTTPKGAPILPVAGRRENAARLLK
CLARALRKAGLSCVEKIVAWSLIVSPGTSTTTPFPWNSNLSQISSNTRDY
LAKMHSDLDFVKESLGSDAQSFGRGNPLLLTSSEASAGFIGDSYLCKLSL
ATHVVLDAVKFARENADEPSAADGRVASVGAGSGDYGVDKTNSNGRVDEG
GSRGREADGKPTHSVVREGTGGASPGVCGGDGGPAEEGGGRTPKELPVYA
GSKPLGSSGTVAGGKSAAARNSGSVNSKGVDEGREGVALPVPVPSWVSGV
TEQEREAA
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