prot_A-nodosum_M_contig944.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig944.23.1
Unique Nameprot_A-nodosum_M_contig944.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length351
Homology
BLAST of mRNA_A-nodosum_M_contig944.23.1 vs. uniprot
Match: D8LES9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES9_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 2.270e-129
Identity = 200/355 (56.34%), Postives = 254/355 (71.55%), Query Frame = 0
Query:    1 MSSYGEPRLSADPRTNFIDDMTSTAGLTLMVGIIAFVFGVFNLVNLDYT-VDWDDADGVFPPILPLLGQLTQSLFGLVSVFVGFQWVASKSGSAMLSLFGLAATLAAWFPFLVQISLISFNANKKIIGGP--PLQV--PWEDASSGEINAVAIMGIXXXXXXXXTV-SALTFLHWKMYRCFAGYAHTYSASYYRSRLTYYGFLVTMTGAVQLALGAYVLDKLEGGPLAAPVITGAFFILWPELSIFVGAMQLVVGFMTLYRSTTPGVGPSTGNRDSMLSVYQMISWFVFVASVGCQVLGQIHSFGGSDPNPTPAIFLLNIVGFSLFPMYLDVMAHTTPENVTKDMFSVSKTMGPG 349
            M+SYGE RL   PR N +DD+T+T+GL L  GII  + G  +L       VDW  +DGVFPPI  LL QLT +LFGLVS+F+GFQ+VAS+ GS + SLFGL  TLAAWFPFL  ++LI+F A+   +GG   PLQ+  P    S GEIN++A+MGI        TV  ALTFL WKMYR F G A TYSA+YYRSRL YYGFL  M GA+Q+ALG++V      G L +PV++G FFILWPELSI VG  Q++ GF  LYRSTTPGVGPSTGN+D+ +  +Q+++W VF+ S+G QVLGQ+     +     PA+F+ N++GF+LFP+YLDV++HTTPENVT DMFS+SKT+G G
Sbjct:    1 MTSYGEARLMDSPRANLVDDLTTTSGLILAYGIIVIIGGTVDLTAASAKGVDWSGSDGVFPPIAILLAQLTVTLFGLVSMFLGFQYVASRWGSKVTSLFGLGITLAAWFPFLTTVALIAFQADHGNVGGGAGPLQILHPTISVSQGEINSIALMGILGFWGYAGTVIGALTFLQWKMYRFFQGGASTYSATYYRSRLGYYGFLSLMVGALQVALGSFVEGMFGWGQLPSPVVSGPFFILWPELSITVGVCQVLFGFYILYRSTTPGVGPSTGNKDAGMFKFQVVAWSVFLISMGAQVLGQVSLAASA----MPALFIRNVIGFALFPIYLDVLSHTTPENVTPDMFSMSKTVGSG 351          
BLAST of mRNA_A-nodosum_M_contig944.23.1 vs. uniprot
Match: D8LET4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET4_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.020e-41
Identity = 113/354 (31.92%), Postives = 178/354 (50.28%), Query Frame = 0
Query:    2 SSYGEPRL-SADPRTNFIDDMTSTAGLTLMVGIIAFVFGVFNL-VNLDYTVDWDDADGVFPPILPLLGQLTQSLFGLVSVFVGFQWVASKSGSAMLSLFGLAATLAAWFPFLVQISLISFNANKKIIGGPPLQVPWEDASSGEINAVAIM-GIXXXXXXXXTVSALTFLHWKMYRCFAGYAHTYSASYYRSRLTYYGFLVTMTGAVQLALGAYVLDKLE----GGPLAAPVITGAFFILWPELSIFVGAMQLVVGFMTLYRSTTPGVGPSTGNRDSM--LSVYQMISWFVFVASVGCQVLGQIHSFGGSDPNPTP------AIFLLNIVGFSLFPMYLDVMAHTTPENVTKDMF 340
            S YG+ RL   DP   +  +M+ TAG+  + G I  V GV++L ++     DW     VFPP++  L  L Q  F +VS+ VGFQ++      +  ++  L  +  + F F V ++   F + K+     P +     AS+ E  +VA M  I           AL  L++KM+   +     ++  +Y++ L + G L  + G VQLALGAYV DK++      PL A  ++G   + +  L+I  GA QLV+G   + R+T     PS+G+ ++   L  +Q  +WFV V S+  QVL Q+ +   +  N         A  +  +VG  LFPMYLD M +TTPE + ++ F
Sbjct:    3 SGYGDNRLLGLDPFGRYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGNSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWTMISLFCSFFSLFTFAVSVAYTGFLSAKESFDFIPSEY---GASTSENRSVASMIAIAYVAYAINNFFALVHLNYKMFMYQSDQWVGFNRGFYKTALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAIAFGAFQLVLGCYIMVRATQK---PSSGSGENAKGLQAFQFAAWFVLVLSICIQVLSQV-TMSSTSTNIVDRYAGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQNDF 349          
BLAST of mRNA_A-nodosum_M_contig944.23.1 vs. uniprot
Match: A0A7S2UB49_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB49_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.320e-31
Identity = 103/349 (29.51%), Postives = 160/349 (45.85%), Query Frame = 0
Query:    5 GEPRLSADPRTNFIDDMTSTAGLTLMVGIIAFVFGVFNLVNLDYTVDWDDADGVFPPILPLLGQLTQSLFGLVSVFVGFQWVASKSGSAMLSLFGLAATLAAWFPFLVQISLISFNA-NKKIIGGPPLQVPWEDASSGEINAVAIMGIXXXXXXXXT-VSALTFLHWKMYRCFAGYAHTYSASYYRSRLTYYGFLVTMTGAVQLALGAYVLDKLEGGPLA-APVITGAFFILWPELSIFVGAMQLVVGFMTLYRSTTPGVGPSTGNRDSMLSVYQMISWFVFVASVGCQVLGQIH-----SFGGSDPNPTPAIFLLNIVGFSLFPMYLDVMAHTTPENVTKDMFSVSKT 345
            G+ RL AD R           GL   +GI+A    + N+ N           GV  P+  L+    Q+ FG +++F G+  +    G   L+L  + AT  AW P+L  +S I+  A N   I          D S  +IN VA MG+          + +L F+ + +Y   +G  +  ++SYY  R   Y FLV + G  QLALG++VL  +  GPL   PV  G + I +PE+S+FVG +Q++VGF  L R     +G   G +D     +Q+    +++  +  +++ Q+        GG+ P     IF     G +  P YLD    TTP  +    +S+  T
Sbjct:   19 GKERLKADQR--------QFGGLIFALGILATFGSLINIANEVGPNGTTSKSGV--PLSNLIAGCAQAFFGTIAMFTGYLSLVYDWGHKSLTLALIIATQLAWLPYLTALSGIAKGARNDSFIPSA------YDPSEADINFVAAMGMLGIIAHGAAYIGSLAFMEFALYAYQSGKTNDRNSSYYLGRSGLYNFLVVLAGFSQLALGSFVLHSIGNGPLTEGPVNVGVYTIYFPEISVFVGLVQILVGFFGLARR----MGKLVGGKDD--HSFQIACGIMWICMLVLELMVQVAYAPGPMMGGAAPTRACIIF-----GLAFMPAYLDAKTRTTPAELPPSYYSMEDT 340          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig944.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LES9_ECTSI2.270e-12956.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LET4_ECTSI3.020e-4131.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UB49_9STRA2.320e-3129.51Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig944contigA-nodosum_M_contig944:159786..164211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig944.23.1mRNA_A-nodosum_M_contig944.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig944 159786..164682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig944.23.1 ID=prot_A-nodosum_M_contig944.23.1|Name=mRNA_A-nodosum_M_contig944.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=351bp
MSSYGEPRLSADPRTNFIDDMTSTAGLTLMVGIIAFVFGVFNLVNLDYTV
DWDDADGVFPPILPLLGQLTQSLFGLVSVFVGFQWVASKSGSAMLSLFGL
AATLAAWFPFLVQISLISFNANKKIIGGPPLQVPWEDASSGEINAVAIMG
ILGFMGYAGTVSALTFLHWKMYRCFAGYAHTYSASYYRSRLTYYGFLVTM
TGAVQLALGAYVLDKLEGGPLAAPVITGAFFILWPELSIFVGAMQLVVGF
MTLYRSTTPGVGPSTGNRDSMLSVYQMISWFVFVASVGCQVLGQIHSFGG
SDPNPTPAIFLLNIVGFSLFPMYLDVMAHTTPENVTKDMFSVSKTMGPGA
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