prot_A-nodosum_M_contig944.21.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig944.21.2
Unique Nameprot_A-nodosum_M_contig944.21.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length383
Homology
BLAST of mRNA_A-nodosum_M_contig944.21.2 vs. uniprot
Match: D8LET4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET4_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 8.080e-113
Identity = 191/374 (51.07%), Postives = 248/374 (66.31%), Query Frame = 0
Query:    4 YGGNRLTGFDPYSAYARETSMTAGLLCLFGLINLVPGVYDLVLNTTDGQDWSGDTDIYPPVVTLLAALIQVIFSVVAMVVGFQWLVSGAGSKKWSLFSFMLSLLSFFTFAVAVSYISFLAAKLRVDFIPSGYSPSNGEHRSVATLLVLGYIAYAANNFIALVHLNCKLLRFQSGKGSVFTRAPYRKLYAFQGLLTLLAGVVQLALGAYIYHRVTAEEDRL---VWSGYLGGPYAVTYPEVSMIHTLLGENCFIHCLSLTTTSQKPRD---HNARSLKAFQSFAWFVL---------AQLSMLSNEQHRTAGTSGFAAQAVALVVGLGLFPIYLDAMYHTTPETIEQGTF-SPTAPWTK-RGDFESEERKIETGT 360
            YG NRL G DP+  Y +E S+TAG+LCLFG INLVPGVYDL L+T DGQDWSG++D++PPVV  LAALIQ+ FS+V+M VGFQ+LV G     W++ S   S  S FTFAV+V+Y  FL+AK   DFIPS Y  S  E+RSVA+++ + Y+AYA NNF ALVHLN K+  +QS +   F R  Y+    F GLLTLLAG VQLALGAY++ +V  +EDRL   + + +L GP  VTY  +++          + C  +   +QKP      NA+ L+AFQ  AWFVL         +Q++M S   +     +GFAAQAVA VVGLGLFP+YLDAMY+TTPETI+Q  F    + W+K +GD E  ERK+E+ +
Sbjct:    5 YGDNRLLGLDPFGRYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGNSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWTMISLFCSFFSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMIAIAYVAYAINNFFALVHLNYKMFMYQSDQWVGFNRGFYKTALMFVGLLTLLAGTVQLALGAYVFDKV--DEDRLSSPLGAIFLSGPLLVTYSRLAIAFGAF--QLVLGCYIMVRATQKPSSGSGENAKGLQAFQFAAWFVLVLSICIQVLSQVTMSSTSTNIVDRYAGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQNDFCGDVSAWSKGKGDIE--ERKVESAS 372          
BLAST of mRNA_A-nodosum_M_contig944.21.2 vs. uniprot
Match: A0A836CMW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.320e-38
Identity = 111/328 (33.84%), Postives = 157/328 (47.87%), Query Frame = 0
Query:   18 YARETSMTAGLLCLFGLINLVPGVYDLVLNTTDGQDWSGDTDIYPPVVTLLAALIQVIFSVVAMVVGFQWLVSGAGSKKWSLFSFMLSLLSFFTFAVAVSYISFLA---AKLRVDFIPSGYSPSNGEHRSVATLLVLGYIAYAANNFIALVHLNCKLLRFQSGKG-SVFTRAPYRKLYAFQGLLTLLAGVVQLALGAYIYHRVTAEEDRLVWSGYLGGPYAVTYPEVSMIHTLLGENCFIHCLSLTTTSQKPRDHNARSLKAFQ---SFAWFVLAQLSMLSNEQHRTAGTSGFAAQAVALVVGLGLFPIYLDAMYHTTPETIEQGTFS 338
            Y  E   TAGL  LFG + ++     +   T  GQ W+G++  +PP+  LLA L Q +F +  + VG  WLVSG GS  WS FS +++  ++F F   +S ISF      +    FIP    P+  +  +V  L  LG+IAY AN   AL     KL R  S  G + +T A Y     + G LTLLAGVVQLALGAY+     +  DRL+      GP+ VTY + S+    +G         L   S   +D    +  AF     FA+  +  + +L+      A  +G  A  V   + L +FP+YLD    + PE      +S
Sbjct:    8 YLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGS--DRLL-EPIAAGPFTVTYSQASIA---MGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAG-RASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYS 328          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig944.21.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LET4_ECTSI8.080e-11351.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CMW6_9STRA2.320e-3833.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig944contigA-nodosum_M_contig944:100535..121131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig944.21.2mRNA_A-nodosum_M_contig944.21.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig944 100424..123643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig944.21.2 ID=prot_A-nodosum_M_contig944.21.2|Name=mRNA_A-nodosum_M_contig944.21.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=383bp
MVIYGGNRLTGFDPYSAYARETSMTAGLLCLFGLINLVPGVYDLVLNTTD
GQDWSGDTDIYPPVVTLLAALIQVIFSVVAMVVGFQWLVSGAGSKKWSLF
SFMLSLLSFFTFAVAVSYISFLAAKLRVDFIPSGYSPSNGEHRSVATLLV
LGYIAYAANNFIALVHLNCKLLRFQSGKGSVFTRAPYRKLYAFQGLLTLL
AGVVQLALGAYIYHRVTAEEDRLVWSGYLGGPYAVTYPEVSMIHTLLGEN
CFIHCLSLTTTSQKPRDHNARSLKAFQSFAWFVLAQLSMLSNEQHRTAGT
SGFAAQAVALVVGLGLFPIYLDAMYHTTPETIEQGTFSPTAPWTKRGDFE
SEERKIETGTKPEVEEAKAVEGGDVKPAESAV*
back to top