prot_A-nodosum_M_contig943.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig943.4.1
Unique Nameprot_A-nodosum_M_contig943.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length611
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig943.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 1..26
e-value: 1.6E-4
score: 22.2
coord: 448..481
e-value: 2.2E-5
score: 24.9
coord: 524..557
e-value: 9.8E-5
score: 22.9
coord: 372..406
e-value: 2.5E-8
score: 34.3
coord: 31..64
e-value: 1.1E-8
score: 35.4
coord: 69..102
e-value: 8.0E-8
score: 32.7
coord: 144..178
e-value: 2.0E-8
score: 34.7
coord: 486..520
e-value: 7.2E-6
score: 26.5
coord: 334..367
e-value: 1.8E-8
score: 34.8
coord: 296..329
e-value: 6.2E-7
score: 29.9
coord: 106..140
e-value: 2.0E-8
score: 34.6
coord: 182..215
e-value: 3.4E-8
score: 33.9
coord: 258..291
e-value: 4.7E-7
score: 30.3
coord: 585..611
e-value: 19.0
score: 6.0
coord: 220..253
e-value: 0.005
score: 17.4
coord: 410..443
e-value: 4.4E-5
score: 24.0
NoneNo IPR availableGENE3D6.10.140.110coord: 81..146
e-value: 9.1E-11
score: 43.9
coord: 503..569
e-value: 1.2E-7
score: 33.8
coord: 159..224
e-value: 5.6E-12
score: 47.8
coord: 387..451
e-value: 1.2E-8
score: 37.1
coord: 236..301
e-value: 5.4E-10
score: 41.4
coord: 8..72
e-value: 2.1E-10
score: 42.7
coord: 308..376
e-value: 2.7E-11
score: 45.6
coord: 460..502
e-value: 5.0E-5
score: 25.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig943contigA-nodosum_M_contig943:11082..12914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig943.4.1mRNA_A-nodosum_M_contig943.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig943 11082..12915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig943.4.1 ID=prot_A-nodosum_M_contig943.4.1|Name=mRNA_A-nodosum_M_contig943.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=611bp
KPSFGVAGTKTAEYCVQHAPDGMVNINNRKCRTEGCRKTPSFGVTGTKTA
EYCAQHAPDGMVNVCKRKCRIEGCGKRPSFGVTGTKTAEYCVQHAPDGMV
NINRKCRIKSCGKRPSFGVTGTKTAEYCAQHAPDGMVDVKSRKCRTEGCG
KIPSFGVAGTKTAEYCAQHAPDGMVDVKSRKCRTEGCGKKPSFGVAGTKT
VEFCVQHAPDGMVNVFRMKCRTKGCGKCASLGVAGTKTVEYCVQHAPDGM
VNVCSRKCRTEGCEKRPSFGVAGTKTTEYCAQHVPDGMVDVCSRKCRAEG
CGMWPSFGVAGTKTAEYCVQHAPDGMVNINSRKCRTEGCRKTPSFGVTGT
KTAEYCAQHAPDGMVDVCSRKCRTEGCGKIPSFGVVGSKTMEYCAQHAPD
GMVDVKNRKCKTQGCGKIPSFGVAGTKTAEYCVQHAPGWMVNVLRMKCRT
EGCGKTPSVGVTGTKTAEFCAQHAPDGMVDVCSRKCRTEGCGKIPSFGVA
GTKTAEYCAQHAPGGVVDVYSGKCRTEGCGKTPSFGVAITKTTEFCVRRA
PDGMVNVCSRKCRVAGTKTVEYCAQHAPDICSRKCRTGGCGKKPSFEVAG
TKTAEYCALHA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys