prot_A-nodosum_M_contig94.60.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig94.60.1
Unique Nameprot_A-nodosum_M_contig94.60.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length115
Homology
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5KCR3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR3_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 2.250e-11
Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    7 GKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            G+ D  + L DV  VPG+ FNLYSLH  Q+TH I+ D  G H+ G  L+F  S  G YL ATRLP
Sbjct:   42 GEVDFCVQLTDVYVVPGISFNLYSLHQTQKTHRIMLDERGVHLFGGRLSFAYSDIGCYLSATRLP 106          
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5K3I1_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I1_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 2.890e-8
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    7 GKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            G+ D R+ + DV  VPG+ FNL+SLH  QR   IV D +G H+    L+F  S  G  L ATRLP
Sbjct:  697 GERDFRVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGRLSFAYSDVGCSLWATRLP 761          
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.920e-8
Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 0
Query:   10 DQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            D  + L DV  VPG+ FNL+SLH  Q+ H I+ D  G H+ G  L+F  S  G  L ATRLP
Sbjct:   45 DFCVQLTDVYVVPGISFNLFSLHQTQKKHRIMLDERGVHLFGGRLSFAYSDIGCSLSATRLP 106          
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5KNR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNR6_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 7.810e-7
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0
Query:    7 GKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            G+ D  + + DV  VPG+ FNL+SLH +QR   IV D +G H+    + F  S  G  L ATRLP
Sbjct:   41 GERDFCVQMSDVYVVPGITFNLFSLHHMQRKQRIVLDETGVHLFDGKIFFAYSDVGCSLWATRLP 105          
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5JU31_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU31_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 8.720e-7
Identity = 30/65 (46.15%), Postives = 38/65 (58.46%), Query Frame = 0
Query:    7 GKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            G+ D  + + DV  VPG+ FNL+SLH  QR   IV D +G H+    L+F  S  G  L ATRLP
Sbjct:   41 GELDFCVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGRLSFAYSDVGCSLWATRLP 105          
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5JX85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX85_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.140e-6
Identity = 29/65 (44.62%), Postives = 37/65 (56.92%), Query Frame = 0
Query:    7 GKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            G+ D  + + DV  VPG+ FNL+SLH  QR   IV D +G H+    + F  S  G  L ATRLP
Sbjct:   41 GERDVCVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGKIFFAYSDVGCSLWATRLP 105          
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.630e-6
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0
Query:    7 GKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            G+ D  + + DV  VPG+ FNL+SLH +QR   IV D +G H+     +F  S  G  L ATRLP
Sbjct:  395 GERDFCVQMSDVYVVPGITFNLFSLHHMQRKQRIVLDETGVHLFDGKRSFAYSDVGCSLWATRLP 459          
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Match: A0A6H5JW31_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW31_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.000e-6
Identity = 29/65 (44.62%), Postives = 37/65 (56.92%), Query Frame = 0
Query:    7 GKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHIIGANLTFTRSSSGSYLRATRLP 71
            G+ D  + + DV  VPG+ FNL+SLH  QR   I  D +G H+    L+F  S  G  L ATRLP
Sbjct:   41 GEADFCVQISDVYVVPGITFNLFSLHHTQRRQRITLDDNGVHLFNGQLSFAYSDVGCSLWATRLP 105          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig94.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KCR3_9PHAE2.250e-1152.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3I1_9PHAE2.890e-847.69Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5JKY9_9PHAE3.920e-848.39Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNR6_9PHAE7.810e-744.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU31_9PHAE8.720e-746.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JX85_9PHAE1.140e-644.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK7_9PHAE1.630e-644.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JW31_9PHAE2.000e-644.62Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig94contigA-nodosum_M_contig94:579628..579972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig94.60.1mRNA_A-nodosum_M_contig94.60.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig94 579590..580062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig94.60.1 ID=prot_A-nodosum_M_contig94.60.1|Name=mRNA_A-nodosum_M_contig94.60.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=115bp
MDVIFHGKNDQRITLIDVAYVPGLGFNLYSLHAVQRTHLIVSDASGTHII
GANLTFTRSSSGSYLRATRLPAGTARRRQGDMRATNLLRQLGHPIPPPPQ
EPPPPQKHVRDWFA*
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