prot_A-nodosum_M_contig937.6.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig937.6.2
Unique Nameprot_A-nodosum_M_contig937.6.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length358
Homology
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A6H5JD09_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD09_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 1.180e-52
Identity = 143/318 (44.97%), Postives = 165/318 (51.89%), Query Frame = 0
Query:  122 RRRLRIYPTG-NRTSKWVTREIAALQFLTGIRMRNEADIRAR--------------------------DGGGISASIGE-------------------DLFHASSGARAAGLGRGRL-----RVGFTPGGGEF----------AVPEGG---------RAPEEDSDSDEGWLDQP--SAGAGGGDEGARLTGATKRVNTAVAGRW----MPGLGSPAAPA-----RRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDELGAEVFKI 358
            +RRLRIYPTG NR SKWVTREIAAL FLTG++MRNEA I A+                          D G    ++G+                          G  AA + RG       R G T  GGE           + P  G         +   +DSDSD GWLDQP  S G GG   G     +  R+  A  GR       G+G   A       RRLRGREA HVR+P  FRH MQ L GH AAVVRQWEQ LT+Q+RLLEGRLFFSCSKGYP+ VSSVIHYKP+EE+ +R  QKRIDE GAE F+I
Sbjct:  165 KRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGXXXXXXXXXXXXXXXXXXPPLLDSGSGVGALGDRSRRGGXXXXXXXXXXXXXXXXXXXHGEAAAEVARGAYPAAESRAGATGAGGEAKEAKDIEGRSSTPTAGGVTFAGNETKNNSDDSDSDNGWLDQPLPSTGRGGASSGHV---SAHRLRVATTGRGGTGTSDGIGGGGARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQDRLLEGRLFFSCSKGYPLMVSSVIHYKPQEEQAKRARQKRIDERGAEAFQI 479          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A835YPH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH7_9STRA)

HSP 1 Score: 128 bits (322), Expect = 6.580e-29
Identity = 103/248 (41.53%), Postives = 119/248 (47.98%), Query Frame = 0
Query:  118 SFPARRRLRIYPTGNRTSK--WVTREIAALQFLTGIRMRNEADI-----RARDGGGISASIGEDLFHASSGARAAGLGRGRLRVGFTPGGGEFAVPEGGRAPEEDSDSDEGWLDQPSAGAGGGDEGARLTGATKRVNTAVAGRWMPGLGSPAAPARRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDELGAEVFKI 358
            S PA+RR RIYP G   ++  W TREIAAL FL+ I MR EA I     RA      SA  G  L  A  GA                G      P         +D DE                A L+ A              G GS   P RRL G EA HVR+P  FRH +  L G  AA VRQWE+ L  Q  LL+GRLFFS +KGYP+AV SVI Y+PKEEE RR   K +DE GAE F++
Sbjct:  296 SVPAKRR-RIYPVGRGQARQRWATREIAALAFLSSIPMRQEAKIIEHGTRAAQHSPGSAGRGAPLSDADGGATGXXXXXXXXXEDGATGHARVREP---------ADEDE----------------ASLSDAXXXXXXXXXXXGQRG-GSSPGPGRRLGGPEATHVRVPRAFRHGLLQLPGQDAAEVRQWERSLANQG-LLDGRLFFSGTKGYPLAVCSVIRYEPKEEELRRRWHKLVDERGAEAFRV 515          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: D7G4Y1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y1_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 9.000e-27
Identity = 108/262 (41.22%), Postives = 123/262 (46.95%), Query Frame = 0
Query:  122 RRRLRIYPTG-NRTSKWVTREIAALQFLTGIRMRNEADIRARDGGG--------ISAS--IGEDLFHASSGA---------------------------------RAAGLGRGRL-----RVGFTPGGGEF----------AVPEGG---------RAPEEDSDSDEGWLDQP--SAGAGGGDEG----ARLTGATKRVNTAVAGRWMPGLGSPAAPA--RRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQ 307
            +RRLRIYPTG NR SKWVTREIAAL FLTG++MRNEA I A+   G        +SA       L  + SG                                   AA + RG       R G T  GGE           + P GG         +   +DSDSD GWLDQP  S G GG   G     RL GAT       A   + G  +  + A  RRLRGREA HVR+P  FRH MQ L GH AAVVRQWEQ LT+Q
Sbjct:  181 KRRLRIYPTGRNRNSKWVTREIAALDFLTGLKMRNEAAILAQGTSGXXXXXDFGVSADDESSPSLLDSGSGVGTSRDSXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEVARGAYPAAEGRGGTTGAGGEAKEDKDIEGRRSTPTGGGVTFADNENKNNSDDSDSDNGWLDQPLPSTGRGGASSGHVSARRLRGATTGHGGMGASAGIGGXXARVSGAGFRRLRGREAAHVRLPANFRHSMQVLPGHSAAVVRQWEQGLTRQ 442          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A4D9D598_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D598_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.220e-13
Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:  257 GLGSPAAPARRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDELGAEVF 356
            G+ S + P + L G +A  V +P + RH  Q    H AAVVRQWE+ + +   +L+GRLF S  +GYP+ V+SV+ YKP  E ++R   ++++E G E F
Sbjct:   28 GVDSTSIPGKELNGLDAFVVSVPESIRHKYQ----HSAAVVRQWERRV-KNAGILDGRLFISSRRGYPLVVASVVEYKPGSESEKRWRARQVNERGGEAF 122          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A485K8L3_9STRA (Aste57867_2928 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8L3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.790e-8
Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 0
Query:  262 AAPARRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMH-------QKRIDELGAEVFKI 358
            A   RRL G E   VRIPP  R+ M +     +A VR WE    +Q  +L GR+F SC KGYPVAV+SV+ Y   + + RR         Q+  D  G   F++
Sbjct:  182 ALAGRRLPGPECHVVRIPPLVRYRMTTKYPPASATVRLWEATCNEQG-VLNGRIFLSCGKGYPVAVASVLQYNGNQTKARRTRHMSFRDAQEPYDWRGKSYFQL 284          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A1V9YCK1_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YCK1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.010e-7
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 0
Query:  261 PAAPARRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDELGAEVF 356
            P+   RRL G +A  V + P FR+ + +     +AVVR+WE  +T++  +L+GR+F S  KGYPV VSSVI Y   E+  R   + +   L  E +
Sbjct:  194 PSLAGRRLPGPDATVVNVLPLFRYRLTTKYPAASAVVRRWEATMTEKG-VLDGRIFLSSGKGYPVGVSSVIKYNGTEKVTRGRKRLQSVMLNPEPY 288          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A067CE10_SAPPC (Cyclin N-terminal domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE10_SAPPC)

HSP 1 Score: 64.3 bits (155), Expect = 1.080e-7
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 0
Query:  266 RRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDEL 351
            RRL G ++  V + P FR+ + +     +AVVR+WE  +T++  +++GR+F S  KGYPV VSSVI Y   E+  R   +KR+  +
Sbjct:   44 RRLPGPDSTVVNVLPLFRYRLTTKYPAASAVVRRWEATMTEKG-VIDGRIFLSSGKGYPVGVSSVIKYNGTEKVTRAGGRKRLQSI 128          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: T0Q285_SAPDV (Cyclin N-terminal domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q285_SAPDV)

HSP 1 Score: 64.3 bits (155), Expect = 1.340e-7
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 0
Query:  266 RRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDEL 351
            RRL G ++  V + P FR+ + +     +AVVR+WE  +T++  +++GR+F S  KGYPV VSSVI Y   E+  R   +KR+  +
Sbjct:  190 RRLPGPDSTVVNVLPLFRYRLATKYPAASAVVRRWEATMTEKG-VIDGRIFLSSGKGYPVGVSSVIKYNGTEKVTRAGGRKRLQSI 274          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A024TI98_9STRA (Cyclin N-terminal domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TI98_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.300e-6
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0
Query:  262 AAPARRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQWEQELTQQERLLEGRLFFSCSKGYPVAVSSVIHY 333
            A   RRL G +   VR+PP  R+ M +     +A VR WE  + +Q  LL GR+F S  KGYPV V+SVI Y
Sbjct:  153 ALAGRRLPGPDCQVVRMPPLIRYRMTTKYPPASATVRLWEGNMNEQG-LLNGRIFLSSGKGYPVTVTSVIKY 223          
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Match: A0A1Z5JZ69_FISSO (Cyclin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ69_FISSO)

HSP 1 Score: 60.1 bits (144), Expect = 3.850e-6
Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 0
Query:  242 ATKRVNTAVAGRWMPGLGSPA-APARRLRGREALHVRIPPTFRHHMQSLLGHGA--AVVRQWEQELTQ---QERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDELGA 353
            A K  N A+AG  M     PA  P RRL G  A+ V IP T    +Q+     A  A +R+WE+          +L+GRLFFS    YPV+V SVI Y+P+ E    M +K+++ LG 
Sbjct:  241 AAKSTNKAMAGTVM----QPAYTPGRRLDGDIAVRVNIPVTNNLLIQTKQKAVARQATIREWERATAHGLCHAPMLDGRLFFSADSSYPVSVFSVIRYEPRREHAAFM-RKKLESLGG 353          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig937.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JD09_9PHAE1.180e-5244.97Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YPH7_9STRA6.580e-2941.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G4Y1_ECTSI9.000e-2741.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D598_9STRA1.220e-1341.00Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A485K8L3_9STRA1.790e-839.42Aste57867_2928 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9YCK1_9STRA1.010e-738.54Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A067CE10_SAPPC1.080e-739.53Cyclin N-terminal domain-containing protein n=1 Ta... [more]
T0Q285_SAPDV1.340e-739.53Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A024TI98_9STRA2.300e-645.83Cyclin N-terminal domain-containing protein n=4 Ta... [more]
A0A1Z5JZ69_FISSO3.850e-638.98Cyclin N-terminal domain-containing protein n=2 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig937contigA-nodosum_M_contig937:125897..130002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig937.6.2mRNA_A-nodosum_M_contig937.6.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig937 125897..132599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig937.6.2 ID=prot_A-nodosum_M_contig937.6.2|Name=mRNA_A-nodosum_M_contig937.6.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=358bp
MSSTVREALLLSEFEDVPHPSAGEETTPTEGGDAGHQSSSIVTLSPRWKP
QDSADSLPEAAAYEVKAEDDAKGVQLSTSHQAPRSPLPLEQDHEHEQAAS
GAGGSWRQPRPTDLLQPSFPARRRLRIYPTGNRTSKWVTREIAALQFLTG
IRMRNEADIRARDGGGISASIGEDLFHASSGARAAGLGRGRLRVGFTPGG
GEFAVPEGGRAPEEDSDSDEGWLDQPSAGAGGGDEGARLTGATKRVNTAV
AGRWMPGLGSPAAPARRLRGREALHVRIPPTFRHHMQSLLGHGAAVVRQW
EQELTQQERLLEGRLFFSCSKGYPVAVSSVIHYKPKEEEDRRMHQKRIDE
LGAEVFKI
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