prot_A-nodosum_M_contig9349.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9349.3.1
Unique Nameprot_A-nodosum_M_contig9349.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length83
Homology
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BLAST of mRNA_A-nodosum_M_contig9349.3.1 vs. uniprot
Match: D7G411_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G411_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.020e-17
Identity = 53/86 (61.63%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    2 LRVEVWRSALRVLDDLVGYVTISTAPLLARPKFTSERWHGLSSPGMET----PALSRSPTRFSSTPPSAGTILLSLGFFPSRETAS 83
            LRVEVWRSA+RVLDDL+GY  I+ APLLARP  TSERWH LS P   +    P LS      +S P SAGTILLSLGF P+  T S
Sbjct:  732 LRVEVWRSAMRVLDDLLGYAAINMAPLLARPGSTSERWHVLSDPNHASTTGDPRLSGE-VAGTSPPSSAGTILLSLGFTPTGGTPS 816
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BLAST of mRNA_A-nodosum_M_contig9349.3.1 vs. uniprot
Match: A0A6H5L011_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L011_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.390e-17
Identity = 51/85 (60.00%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:    2 LRVEVWRSALRVLDDLVGYVTISTAPLLARPKFTSERWHGLSSPGMETPALSRSPT---RFSSTPPSAGTILLSLGFFPSRETAS 83
            LRVEVWRSA+RVLDDL+GY  I+ APLLARP  TSERWH LS P   +       T     +S P SAGTILLSLGF P+  T S
Sbjct:  748 LRVEVWRSAMRVLDDLLGYAAINMAPLLARPGSTSERWHVLSDPNSASTTGDPRQTGDVAGASPPSSAGTILLSLGFIPTGGTPS 832
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9349.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G411_ECTSI1.020e-1761.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L011_9PHAE1.390e-1760.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..59
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9349contigA-nodosum_M_contig9349:10034..10711 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9349.3.1mRNA_A-nodosum_M_contig9349.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9349 10031..10711 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9349.3.1 ID=prot_A-nodosum_M_contig9349.3.1|Name=mRNA_A-nodosum_M_contig9349.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=83bp
MLRVEVWRSALRVLDDLVGYVTISTAPLLARPKFTSERWHGLSSPGMETP
ALSRSPTRFSSTPPSAGTILLSLGFFPSRETAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf