prot_A-nodosum_M_contig93.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig93.9.1
Unique Nameprot_A-nodosum_M_contig93.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length278
Homology
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BLAST of mRNA_A-nodosum_M_contig93.9.1 vs. uniprot
Match: D7G5P4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P4_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.890e-43
Identity = 102/162 (62.96%), Postives = 124/162 (76.54%), Query Frame = 0 
Query:    1 MPNNKKKKAGSKASKXXXXXXXXXXXXXXXKDDLTGLDEILSNPEEMAAARQQAAEKGTGYKPKTGQENAKIGLKGFAQAAQNPEMLTEAMSMLRDXXXXXXXXXXXXXXXFKSEISQYIETIKNNSAFQAAMGEARRKYQALLKDPEKMKEATDKYHATIK 162
            MP NKKK  G+  +K               KDDL GLDEILSNPE+MA A+++A E  +G+KP++G++NA+IGLKGF QA QNP M  +AMSML D  XXXXXXXXXXXX FKSEI+QY+ET+KNNSAF+ AM EA+RKYQALL DPEKMK+ATDKY+A +K
Sbjct:    1 MPGNKKKNKGANKAKNAPARSNAAN-----KDDLAGLDEILSNPEQMAEAQREAVE-ASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQATDKYNALMK 156
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5P4_ECTSI1.890e-4362.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:28261..60043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.9.1mRNA_A-nodosum_M_contig93.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig93 26753..60043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig93.9.1 ID=prot_A-nodosum_M_contig93.9.1|Name=mRNA_A-nodosum_M_contig93.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=278bp
MPNNKKKKAGSKASKASKAKGGSNRSNAANKDDLTGLDEILSNPEEMAAA
RQQAAEKGTGYKPKTGQENAKIGLKGFAQAAQNPEMLTEAMSMLRDPETI
KAAEEMMQDPEFKSEISQYIETIKNNSAFQAAMGEARRKYQALLKDPEKM
KEATDKYHATIKAQQEGAAAVAAPGEATSKAGATGTAGTDGGDVLRDGGK
EAVAAKAENEIGVGDDGEPLGPEADGLEEDEDEDEEGESAESGAGAIKAP
EVVPASGDVPAQVEEAKAAEGESAPAV*
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