prot_A-nodosum_M_contig9265.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9265.9.1
Unique Nameprot_A-nodosum_M_contig9265.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length125
Homology
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BLAST of mRNA_A-nodosum_M_contig9265.9.1 vs. uniprot
Match: D8LEW9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW9_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 4.870e-7
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 MLGACLMLGAVEEACLRWTAV-------EGMDREDASLDAKKK 36
            M+G CLMLG VEEACL+WTAV       EGM+REDAS DAK++
Sbjct:  871 MVGVCLMLGVVEEACLKWTAVQNERQLVEGMNREDASQDAKRR 913
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BLAST of mRNA_A-nodosum_M_contig9265.9.1 vs. uniprot
Match: A0A6H5KBH4_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH4_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 4.910e-7
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 MLGACLMLGAVEEACLRWTAV-------EGMDREDASLDAKKK 36
            M+G CLMLG VEEACL+WTAV       EGM+REDAS DAK++
Sbjct:  876 MVGVCLMLGVVEEACLKWTAVQNERQLVEGMNREDASQDAKRR 918
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9265.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEW9_ECTSI4.870e-765.12USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBH4_9PHAE4.910e-765.12USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9265contigA-nodosum_M_contig9265:8829..9920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9265.9.1mRNA_A-nodosum_M_contig9265.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9265 8829..9920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9265.9.1 ID=prot_A-nodosum_M_contig9265.9.1|Name=mRNA_A-nodosum_M_contig9265.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=125bp
MLGACLMLGAVEEACLRWTAVEGMDREDASLDAKKKRQRERAKAKVRKSK
NASAATTATTATVEAVAAKDSPLPNGTAVGAGARPAPVGDEDGFVTTEKL
KSRRSATAQNWRARSWGAGSFNLHG
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