prot_A-nodosum_M_contig924.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig924.4.1
Unique Nameprot_A-nodosum_M_contig924.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length173
Homology
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: D7FY65_ECTSI (AAA_12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY65_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 1.620e-70
Identity = 110/173 (63.58%), Postives = 142/173 (82.08%), Query Frame = 0
Query:    1 VISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQAQAALKRHGSKVEVRVITFYNMQKRELERQFEGKSDICRITISSVDACQGSDADVVIVSTVRSDG-GHRLSGFMVDPRRVNVALSRAKEECIIVGDNNTLRSAGGDMWRSISAHFAS 172
            V+S TFYDG+LKTA+  +L R+S +P +W+HVSGGE +H  RGYSN  E  KVV++ +A++ R+G + ++RVITFYNMQKR+LER+F+ K DI  + I+SVD+CQGSDADVV++STVRS G G++LSGFM D RRVNVA+SRAKEECIIVGD +TLRS GG MWRS++ HF S
Sbjct:  520 VVSSTFYDGKLKTAEELRLTRMSHQPSKWVHVSGGETKHQGRGYSNHLEIPKVVQEVRASMHRYGREADIRVITFYNMQKRDLEREFKDKPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDRRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVADHFKS 692          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: A0A6H5JRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT8_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 6.400e-30
Identity = 55/101 (54.46%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    1 VISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQAQAALKRHGSKVEVRVITFYNMQKRELERQFEGKSDICRITISSV 101
            V+S TFYDG+LKTA+  +L R+S +PC+W+HVSGGE +H  RGYSN  E  KVVE+ +A+++R+G++ ++RV TFYNMQKR+LER F+ + D+  + I SV
Sbjct:  614 VVSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASIQRYGTEADIRVNTFYNMQKRDLERDFKHQPDMKHVRIVSV 714          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: E1ZLN5_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLN5_CHLVA)

HSP 1 Score: 119 bits (299), Expect = 3.730e-28
Identity = 76/184 (41.30%), Postives = 98/184 (53.26%), Query Frame = 0
Query:    2 ISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQAQAALK-------RHGSKVEVRVITFYNMQKRELERQFEGKSDI---CRITISSVDACQGSDADVVIVSTVR-----SDGGHRLSGFMVDPRRVNVALSRAKEECIIVGDNNTLRSAGGDMWRSISAHF 170
            IS  FY   L TA      R   +PCR + V G EV H   GYSNP EA+K V  A+ A K       RH +   + +IT YN Q+  LER    +  +   C   + S+DACQG +AD V+VSTVR     S+  H LS F  D RRVNVA+SRA+  C++VG   TLR      W ++ A +
Sbjct:  566 ISAEFYADRLHTAAAAAARRALAEPCRMVQVGGKEVWHQGGGYSNPVEASKAVRVARKAAKELRELGIRHPT---IYIITIYNRQRDLLERLVAKEPALRGACDCQVLSIDACQGDEADAVVVSTVRNAFCGSENQH-LSSFFRDRRRVNVAMSRARHLCVVVGSLYTLRLPKARPWSAVLADY 745          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: R1E0W5_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E0W5_EMIHU)

HSP 1 Score: 105 bits (261), Expect = 4.840e-23
Identity = 65/166 (39.16%), Postives = 96/166 (57.83%), Query Frame = 0
Query:    1 VISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQAQAALKRHG-SKVEVRVITFYNMQKRELERQFEGKSDICRITISSVDACQGSDADVVIVSTVRSDGGHRLSGFMVDPRRVNVALSRAKEECIIVGDNNTLRSAGGDMWRS 165
            ++S TFY  +L TA  T  AR  P P  +++V+GG      R   N  EA +VV  A   ++  G S+  + V++FYN Q+  LER    ++ +  + + SVD+ QG +ADV+I+S VR+D    L GF+ D RRVNVALSRA+E  ++ G +  L      +WRS
Sbjct:  519 IVSSTFYFNKLMTAPSTARARQHPLPACFVNVTGGHEEFQERSCFNKKEAEEVVSLALHCVEYLGFSQERINVLSFYNAQRDILERML-ARAQLEDVAVLSVDSMQGREADVIILSCVRADVAGGL-GFVADARRVNVALSRARESLVVCGSSVCLEVER--IWRS 680          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: R1DL56_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL56_EMIHU)

HSP 1 Score: 103 bits (257), Expect = 1.610e-22
Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = 0
Query:    1 VISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQAQAALKRHG-SKVEVRVITFYNMQKRELERQFEGKSDICRITISSVDACQGSDADVVIVSTVRSDGGHRLSGFMVDPRRVNVALSRAKEECIIVGDN 152
            ++S TFY  +L TA  T  AR  P P  +++V+GG      R   N  EA +VV  A   ++  G S+  + V++FYN Q+  LER    ++ +  + + SVD+ QG +ADV+I+S VR+D    L GF+ D RRVNVALSRA+E  ++ G +
Sbjct:  406 IVSSTFYFNKLMTAPSTARARQHPLPACFVNVTGGHEEFQERSCFNKKEAEEVVSLALHCVEYLGFSQERINVLSFYNAQRDILERML-ARAQLEDVAVLSVDSMQGREADVIILSCVRADVAGGL-GFVADARRVNVALSRARESLVVCGSS 556          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: A0A7S4MYX4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4MYX4_GUITH)

HSP 1 Score: 103 bits (256), Expect = 1.940e-22
Identity = 64/172 (37.21%), Postives = 102/172 (59.30%), Query Frame = 0
Query:    2 ISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVR-HDSRGYSNPPEAAKVVEQAQAALKR--HGSKVEVRVITFYNMQKRELERQFEGKSDICRITISSVDACQGSDADVVIVSTVRSDGGHRLSGFMVDPRRVNVALSRAKEECIIVGDNNTLRSAGGDMWRSISAHF 170
            +S  FY G+LKT   T  AR  P P  ++HVSG E +  +S    N  EA  V+E  QA +    H  + EV V++FYN QK  + ++   K ++  + + SVD+ QG +A+VV++S VR+  G  + GF+ D RRVNVA+SRA++  +++GD   L      +W+S+ +++
Sbjct:  334 VSREFYRGKLKTDSETAQARSHPLPASFVHVSGIESKPSNSSSLMNDMEADAVLEIVQAMINSGVHTQR-EVVVLSFYNGQKSIISKKLL-KKNLGDVEVMSVDSMQGREAEVVVLSCVRTLAGGSV-GFLADRRRVNVAISRARQSLVVIGDEQALMQ--NKLWKSVLSYY 500          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: K0TIE7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIE7_THAOC)

HSP 1 Score: 102 bits (254), Expect = 4.260e-22
Identity = 67/181 (37.02%), Postives = 98/181 (54.14%), Query Frame = 0
Query:    6 FYDGELKTADGTKLARLSPK---------PCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQAQAALKRHG-----SKVEVRVITFYNMQKRELERQFEGKSDICRITISSVDACQGSDADVVIVSTVRSD---GGHRLSGFMVDPRRVNVALSRAKEECIIVGDNNTLRSAGGDMWRSISAH 169
            FY+GE++  DG  + R S K         P ++IHV+G E +     Y N  E  KVV   Q   +R G     S  ++R+ITFY  Q   L+R    K  + R+ + +VD+ QG +AD+ IVS VRS    G    +GF+ D RR+NVAL+RA+   + VG++N L   G D  R++ +H
Sbjct:  680 FYNGEIQ--DGDNVLRDSYKSDLYFSFEAPYQFIHVTGVESQQFGGSYENEEECKKVVSLVQQIKRRSGTSNWQSADKLRIITFYQGQVTLLKRMLS-KKGLGRVFVGTVDSNQGCEADITIVSFVRSSAKRGVRHATGFLTDTRRINVALTRARHHLVCVGNSNLLAKEGSDAVRNLISH 857          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: A0A2P6VHN8_9CHLO (Putative ATP-dependent helicase-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VHN8_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 4.330e-21
Identity = 67/186 (36.02%), Postives = 96/186 (51.61%), Query Frame = 0
Query:    2 ISDTFYDGELKTADGTKLARLS-PKPCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQA-QAALKRHGSKVE---VRVITFYNMQ----KRELERQFEGK--SDICRITISSVDACQGSDADVVIVSTVRSDGGHR-----LSGFMVDPRRVNVALSRAKEECIIVGDNNTLRSAGGDMWRSISAHFA 171
            +S+ FY G L+T      AR +   PCR + V G E   D  G++N   A   +  A +A +   G  V+   + +IT YN Q    K  LER  EG+  +  C  ++ SVDACQG + D VIVSTVR+          LS F  D RR+NVA+SRA+  C++VG+  TL       W ++   ++
Sbjct:   95 VSNEFYAGRLRTPAAVAAARAAVASPCRLVDVWGREHWWDMAGFNNKTGAEAAIRAAGEALVALLGIGVQHPTIYIITLYNRQRDLLKLLLERSREGRRLAAACSCSVLSVDACQGDEVDAVIVSTVRNVFNSNCKSLNLSKFFRDRRRINVAMSRARYMCVVVGNKRTLNVPKAKPWGAVLTGYS 280          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: A0A7S0GNV1_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GNV1_MICPS)

HSP 1 Score: 96.7 bits (239), Expect = 3.090e-20
Identity = 58/164 (35.37%), Postives = 86/164 (52.44%), Query Frame = 0
Query:    7 YDGELKTAD-GTKLARLSPKPCRWIHVSGGE-VRHDSRGYSNPPEAAKVVEQAQAALKRHGSKVEVRVITFYNMQKRELERQFEGKSDICRITISSVDACQGSDADVVIVSTVRSDGGHRLSGFMVDPRRVNVALSRAKEECIIVGDNNTLRSAGGDMWRSISA 168
            +D    T D  +K    S +   W+ VSG E    +   Y N  E A  V  A+   +RHG +  +  +TFY  Q   L         +  +T   VDACQGS+ D V++ST R++   R  GF+ DPRR+NVA+SRAK +C+I+GD  T+    G  W ++++
Sbjct:   56 FDAHKVTTDVSSKDEDDSKRAMVWVQVSGWEETPEEGTSYVNRLEVAATVAAARRVRERHGPRCSIAALTFYKGQYLALMDAMPASLGVECLT---VDACQGSEFDFVLISTTRAND-RRAVGFVSDPRRINVAISRAKRQCVILGDARTMAGRPGTDWHAVAS 215          
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Match: A0A7S0L886_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L886_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 1.590e-18
Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 0
Query:    1 VISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVRHDSRGYSNPPEAAKVVEQAQAALKRHGSKV--EVRVITFYNMQKRELERQFEGKSDICRITISSVDACQGSDADVVIVSTVRS---DGGHRLSGFMVDPRRVNVALSRAKEECIIVG 150
            ++S++FY+ +LKTAD     R    P  ++ V+ G    +   + N  EA  VV  AQ  + RH S    ++ V+TFYN Q+  L  + E  + +  I + SVD+ QG + DV+I+S VRS   DG     GF+ D RR+NVA SRA+E  +++G
Sbjct:  113 LVSNSFYNRKLKTADMITADRSFALPANFVDVADGLTSREGSSFVNAAEADAVVRVAQLFV-RHASFAMQQLTVLTFYNAQRELLLERLEA-AGLNEIDVVSVDSMQGREQDVIILSCVRSRSNDGSRVSLGFLNDARRINVAFSRARECLVVLG 265          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig924.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY65_ECTSI1.620e-7063.58AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JRT8_9PHAE6.400e-3054.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
E1ZLN5_CHLVA3.730e-2841.30Expressed protein n=1 Tax=Chlorella variabilis Tax... [more]
R1E0W5_EMIHU4.840e-2339.16Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1DL56_EMIHU1.610e-2239.87Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S4MYX4_GUITH1.940e-2237.21Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
K0TIE7_THAOC4.260e-2237.02Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A2P6VHN8_9CHLO4.330e-2136.02Putative ATP-dependent helicase-like n=1 Tax=Micra... [more]
A0A7S0GNV1_MICPS3.090e-2035.37Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
A0A7S0L886_9EUKA1.590e-1837.42Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..172
e-value: 1.4E-41
score: 144.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..155
IPR041679DNA2/NAM7 helicase-like, C-terminalPFAMPF13087AAA_12coord: 3..152
e-value: 4.5E-33
score: 114.5
IPR041679DNA2/NAM7 helicase-like, C-terminalCDDcd18808SF1_C_Upf1coord: 2..166
e-value: 8.39035E-47
score: 149.307
IPR045055DNA2/NAM7-like helicasePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 3..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig924contigA-nodosum_M_contig924:71072..72497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig924.4.1mRNA_A-nodosum_M_contig924.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig924 71072..72497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig924.4.1 ID=prot_A-nodosum_M_contig924.4.1|Name=mRNA_A-nodosum_M_contig924.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=173bp
VISDTFYDGELKTADGTKLARLSPKPCRWIHVSGGEVRHDSRGYSNPPEA
AKVVEQAQAALKRHGSKVEVRVITFYNMQKRELERQFEGKSDICRITISS
VDACQGSDADVVIVSTVRSDGGHRLSGFMVDPRRVNVALSRAKEECIIVG
DNNTLRSAGGDMWRSISAHFAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR041679DNA2/NAM7-like_C
IPR045055DNA2/NAM7-like