prot_A-nodosum_M_contig921.13.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig921.13.1
Unique Nameprot_A-nodosum_M_contig921.13.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length367
Homology
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BLAST of mRNA_A-nodosum_M_contig921.13.1 vs. uniprot
Match: A0A6H5KJ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ96_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 7.000e-16
Identity = 56/125 (44.80%), Postives = 67/125 (53.60%), Query Frame = 0 
Query:    1 MPANLFVLIFPRKVQAHTVFVTRRGKPKSKW---GSNPQGGFLNRDSKHAKGDDRNAVRDPMRPGANALNSSAXXXXXXXXXXXXXXXRSHPDGGASSAKDNELTNQTTVRIQLSRPTEELGPGP 122
            MP+NLFV++FPR+VQAHTVFV R+ KPKSKW   G     G L RDSK+ KGD              A   S                 +     A SA+ NEL NQ TVR+QLSRPTE++ P P
Sbjct:    1 MPSNLFVVVFPRRVQAHTVFVDRKEKPKSKWSVGGLRSPPGLLGRDSKNGKGDXXXXXXXXXXXXXXASCGSVNSGGATGGSSSRDESLARASASAVSAR-NELKNQKTVRVQLSRPTEDVVPKP 124
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BLAST of mRNA_A-nodosum_M_contig921.13.1 vs. uniprot
Match: D7G144_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G144_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 9.430e-15
Identity = 69/125 (55.20%), Postives = 79/125 (63.20%), Query Frame = 0 
Query:    1 MPANLFVLIFPRKVQAHTVFVTRRGKPKSKW---GSNPQGGFLNRDSKHAKGDDRNAVRDPMRPGANALNSSAXXXXXXXXXXXXXXXRSHPDGGASSAKDNELTNQTTVRIQLSRPTEELGPGP 122
            MP+NLFV++FPR+VQAHTVFV R+ KPKSKW   G     G L RD K+ KGDD                   XXXXXXXXXXXXXXX       A SA+ NEL NQ TVR+QLSRPTE++ P P
Sbjct:    1 MPSNLFVVVFPRRVQAHTVFVDRKEKPKSKWSVGGLRSPPGLLGRDPKNGKGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASASAVSAR-NELKNQKTVRVQLSRPTEDVIPEP 124
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig921.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ96_9PHAE7.000e-1644.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G144_ECTSI9.430e-1555.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig921contigA-nodosum_M_contig921:261333..291464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig921.13.1mRNA_A-nodosum_M_contig921.13.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig921 261333..296726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig921.13.1 ID=prot_A-nodosum_M_contig921.13.1|Name=mRNA_A-nodosum_M_contig921.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=367bp
MPANLFVLIFPRKVQAHTVFVTRRGKPKSKWGSNPQGGFLNRDSKHAKGD
DRNAVRDPMRPGANALNSSASSSGSGAAGGGGSDERSHPDGGASSAKDNE
LTNQTTVRIQLSRPTEELGPGPANGDSMSWRASSSARPEGKGFHKGIGGG
TAGKKAGLGSSAHNRPTDEGLASTISRQRRERRGSFPLPGLRGAALVDAS
TSGRARSFTVSDGEGGGSSSTGSSMGLPRSRGSSIESGVPSTTGASRHSD
VGSTATNQSNPQQQQQPEEGDVSSADSPLPGSAVSGNAGGKNPFAFEALK
AGTSPLPQPSAGVVAKGLDRRSESADEIIEGGTGDRREAGIEPVTKADLV
NGSEGGEVEECKHPAAG
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