prot_A-nodosum_M_contig920.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig920.3.1
Unique Nameprot_A-nodosum_M_contig920.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length463
Homology
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 1.970e-139
Identity = 235/487 (48.25%), Postives = 289/487 (59.34%), Query Frame = 0
Query:    4 TRITTLLTCFAPTVLLAAAPPGSLR---RPQEDTKATVIAPRRLPTSDLEPAVDEEGYYAHLGCYMDKEDDRVLGM-------KLVRDDMTAELCHEYCNVRGAFFMATQYGNECFCSEEGDLDYDRHSIGVCDMSCAGDDSERCGGFYAFDLYELVWPDTPTDLEYMDCYADDAEDSIMSNMYASDDMTSAVCRDHCKENNALYYATQFGNECWCGTSDVFADYEKHGKGTCHIRCAGDTSTACGGLYAFSLYRF---------IDESPEPTSEPASD---STEEVGSVNFENTYPFDG----TTFSGDGTYYGETSSGNCAIMP-IPSMYSGMIPVALNAGQYGGSEMCGACIEGEGSGNGAGSDPITGTFKAYVMDKCPECSTGDLDFSKSGDGRWDISWKFVACPGSDKPSFIFEGSHEYFWKIQPRGTKTPVTELTVDGASGTKTDDNFFEIPG-APYPLYGAQTVKTTTMLGKTATQEVSL 462
            T  T+++T  A  +L+ A P  SL    R  E   A   A R L  S  E        Y HLGCY+D       GM        LV D MT ELC++ C+  GAFFM TQ GNEC CS E DLDY     GVCD  CAGD +E CGG    DLY+L   D P   EY  C++D  E  +M +M   + MT+ +CRDHC+ ++A+YYATQ+GNEC+CG S    DYE HG GTCH+ CAGD+ +ACGG +AFSL++F         + +  EP SEPA +   ST        E+  P  G    TTF GDGTYY   S+GNC      PS+YSGM PVALNA QYG S MCG+C+EGEG+G G G +PI GTFK ++MDKCPEC  GDLDF    DGRWDI W+FVACPG ++ SF       Y+WKIQPRGT TPV  LT+ G +  +TDDN FE+   +  P Y  Q V TTT+ G     E+S+
Sbjct:   59 TAATSIMTRLAAALLVCATPVASLETSLRGAEVAAAAGGARRGLSGSSYES-------YEHLGCYVDN------GMVNSSPHLPLVLDAMTNELCYDRCHELGAFFMGTQKGNECRCSREEDLDYFSFESGVCDEPCAGDSTETCGGDLTLDLYKLTPADEPDHEEYEGCWSDLGESRVMQDMLVDESMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFKFGADGMPDPAVPDVSEPPSEPAPEPVVSTPAPSMSEAESKTPISGGVYGTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPG-EEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 2.470e-131
Identity = 224/512 (43.75%), Postives = 281/512 (54.88%), Query Frame = 0
Query:   10 LTCFAPTVLLAAAPPGSLRRPQEDTKATVIAPRR-LPTSDLEPAVDEEGYYAHLGCYMDKEDDRVLGM-------KLVRDDMTAELCHEYCNVRGAFFMATQYGNECFCSEEGDLDYDRHSIGVCDMSCAGDDSERCGGFYAFDLYELVWPDTPTDLEYMDCYADDAEDSIMSNMYASDDMTSAVCRDHCKENNALYYATQFGNECWCGTSDVFADYEKHGKGTCHIRCAGDTSTACGGLYAFSLYRF-IDESPEPTSEPASD-----------------------------------------------STEEVGSVNFENTYPFDGTTFSGDGTYYGETSSGNCAIMP-IPSMYSGMIPVALNAGQYGGSEMCGACIEGEGSGNGAGSDPITGTFKAYVMDKCPECSTGDLDFSKSGDGRWDISWKFVACPGSDKPSFIFEGSHEYFWKIQPRGTKTPVTELTVDGASGTKTDDNFFEI--PGAPYPLYGAQTVKTTTMLGKTATQEVSL 462
            +T  A  +L+ A P  SL       + +    RR L  S  E        Y H+GCY+D       GM        LV + MT E+C++ C+  G+FFM TQ GNEC CS E DL Y     GVCD+ CAGD  E CGG    DLY+L    TP   EY+ C++D  E  +M +M   + MT+ +CRDHC+ ++A+YYATQ+GNEC+CG S    DYE HG GTCH+ C GD+ +ACGG +AFSLY+F  D  PEP    ++                                                S+   G       Y   G TF+G+GTYY  TS+GNC      PS+Y GM PVALN  QYG S MCGAC+EGEG+G G+GSDP+ GTFK ++MDKCPECS GDLDF    DGRWDI WKFV CP  ++ SF  E   EY+WKIQPRGT TPV  LT+ G +  +TDDN FE+  P    P Y  Q V TTT+ G     E+S+
Sbjct:    1 MTRLAAALLVCATPVASLETSLRGAEVSAGGARRGLSGSSYEA-------YEHVGCYVDN------GMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAFDFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQFGADGMPEPDVPESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGGGGDVSGGEY---GITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGD-PWYEPQMVVTTTVGGVVEETEMSV 494          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.470e-72
Identity = 117/220 (53.18%), Postives = 156/220 (70.91%), Query Frame = 0
Query:   47 SDLEPAVDEEGYYAHLGCYMDKEDDRVLGMK-LVRDDMTAELCHEYCNVRGAFFMATQYGNECFCSEEGDLDYDRHS-IGVCDMSCAGDDSERCGGFYAFDLYELVWPDTPTDLEYMDCYADDAEDSIMSNMYASDDMTSAVCRDHCKENNALYYATQFGNECWCGTSDVFADYEKHGKGTCHIRCAGDTSTACGGLYAFSLYRFIDESPEPTSEPASDS 264
            S+ EP     G Y H+GC+ D + DRVL    L+  DMTAELC+E C+ +GA +MATQ+G EC+CS +G LDYDRH   GVCD  C GD+SE CGG ++F+LY L W   P D EY+ CY D+  D ++S+M +SDDMT+AVCR+HC + +A YY TQF +ECWCGTSD  ADYE+HG+G CH+ C+GD + ACGG  A+SL+++ +    PT+ P +DS
Sbjct: 1134 SESEPG-GRPGAYEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKYDNGGEAPTTAPVTDS 1352          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 9.490e-70
Identity = 110/183 (60.11%), Postives = 134/183 (73.22%), Query Frame = 0
Query:  281 GTTFSGDGTYYGETSSGNCAIMP-IPSMYSGMIPVALNAGQYGGSEMCGACIEGEGSGNGAGSDPITGTFKAYVMDKCPECSTGDLDFSKSGDGRWDISWKFVACPGSDKPSFIFEGSHEYFWKIQPRGTKTPVTELTVDGASGTKTDDNFFEIPGAPYPLYGAQTVKTTTMLGKTATQEVSL 462
            G  +SG+GTYYG T++G C+    +P MY GMIPVALNA QYG S MCGAC+EG  SG+G+G++PI  TFKA++ DKCPEC  GDLDFS SGDGRWDI WKFVACPG ++ SF+   ++ Y+WK+QPRGT TPV  LTVDG S  +T DN FE+        GAQTV TTT+ G T T EVS+
Sbjct:  105 GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPG-EETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.010e-65
Identity = 107/188 (56.91%), Postives = 129/188 (68.62%), Query Frame = 0
Query:  278 PFDGTTFSGDGTYYGET--SSGNCAIM-PIPSMYSGMIPVALNAGQYGGSEMCGACIEGEGSGNGAGSDPITGTFKAYVMDKCPECSTGDLDFSKSGDGRWDISWKFVACPGSDKPSFIFEGSHEYFWKIQPRGTKTPVTELTVDGASGTKTDDNFFEIPGAPYPLYGAQTVKTTTMLGKTATQEVSL 462
            P+D   FSGD TYYG T    GNCAI  P+P MY GMIPVALN  QY  S MCGACIEGEG G G G DP+ G FKAYV D+CPEC  GDLDF+  GDGRWDISW FV C G    +F+FEGS+E++WKIQPRG ++PV  L ++G    +++DNFF + G P+   G Q V T T+L K   Q V++
Sbjct:   36 PYD-EQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFD--GEQEVHTKTVLNKRRRQSVAM 220          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.080e-65
Identity = 111/217 (51.15%), Postives = 149/217 (68.66%), Query Frame = 0
Query:   53 VDEEG--YYAHLGC--YMDKEDDRVLGMKLVRDDMTAELCHEYCNVRGAFFMATQYGNECFCSEEGDLDYDRHS-IGVCDMSCAGDDSERCGGFYAFDLYELVWPDTPTDLEYMDCYADDAEDSIMSNMYASDDMTSAVCRDHCKENNALYYATQFGNECWCGTSDVFADYEKHGKGTCHIRCAGDTSTACGGLYAFSLYRFIDESPEPTSEPASDS 264
            VD EG  Y+A L C  ++ K+    +   L+  DMTAELC+E C+ +GA +MATQ+G EC+CS +G LDYDRH   GVCD  C GD+SE CGG ++F+LY L W   P D EY+ CYAD   D ++ +M +SD+MT+ VCR+HC + +A YY TQF +ECWCGTSD  ADYE+HG+G CH+ C+GD + ACGG  A+SL++  +    PT  P +DS
Sbjct:  790 VDGEGCLYFAGLACLPHLAKQPLHHVRSGLISSDMTAELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFKHDNGGKTPTMAPVTDS 1006          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 204 bits (520), Expect = 4.520e-59
Identity = 99/183 (54.10%), Postives = 130/183 (71.04%), Query Frame = 0
Query:  283 TFSGDGTYYGETSSGNCAIM-PIPSMYSGMIPVALNAGQYGGSEMCGACIEGEGSGNGAGSDPITGTFKAYVMDKCPECSTGDLDFSKSGDGRWDISWKFVACPGSDKPSFIFEGSHEYFWKIQPRGTKTPVTELTVDGASGTKTDDNFFEIP---GAPYPLYGAQTVKTTTMLGKTATQEVS 461
            TF GDGTYYG T+ GNCAI  P+P MYSGM+PVA+N  QY  S+ CGAC+   G G G+G++P+ GTFKAYV D+CPEC  GD+D SKSGDGRW + W+F+ CPG +   F+FEGS+ ++ K+QPRG KTPVT  +V+G  GTKT DNF+ +    G  YPL    TV+  T+L +  T +++
Sbjct:   23 TFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPG-EWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPL----TVQMRTVLNEWITVKLA 200          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.310e-58
Identity = 97/210 (46.19%), Postives = 141/210 (67.14%), Query Frame = 0
Query:   41 PRRLPTSDLEPAVDEEGYYAHLGCYMDKEDDRVLGMKLVRDDMTAELCHEYCNVRGAFFMATQYGNECFCSEEGDLDYDRHSIGVCDMSCAGDDSERCGGFYAFDLYELVWPDTPTDLEYMDCYADDAEDSIMSN-MYASDDMTSAVCRDHCKENNALYYATQFGNECWCGTSDVFADYEKHGKGTCHIRCAGDTSTACGGLYAFSLYRF 249
            P   P  ++   +  +  Y+++GC+ D ++DRV         MT  +C EYC  R A +MATQYG EC+CS + +++YDRHS GVCD +C GD ++ CGGF AFDLY++  P  PT  EY+ C+ADD ED ++ + +    DMT AVCR +C+E +A +YATQ+G+ECWCG S+   DY++HG+G+C   C+GD + ACGG  AF+L++F
Sbjct:  415 PVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKF 624          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 200 bits (509), Expect = 2.040e-57
Identity = 97/182 (53.30%), Postives = 129/182 (70.88%), Query Frame = 0
Query:  284 FSGDGTYYGETSSGNCAIM-PIPSMYSGMIPVALNAGQYGGSEMCGACIEGEGSGNGAGSDPITGTFKAYVMDKCPECSTGDLDFSKSGDGRWDISWKFVACPGSDKPSFIFEGSHEYFWKIQPRGTKTPVTELTVDGASGTKTDDNFFEIP---GAPYPLYGAQTVKTTTMLGKTATQEVS 461
            F G+GTYYG T+ GNCAI  P+PSMY+GM+PVA+N  QY  S  CGAC++  G G G+G++PI GTFKAYV D+CPEC  GD+D SK GDGRW + WKF+ CPG +   F+FEGS+ Y+ K+QPRG KTPV+ L+V G  GTKT DNF+ +    G  +P+    TV+  T+L +  T +++
Sbjct:   29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPG-EFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPI----TVQMRTVLNEWITVQLA 205          
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 2.360e-57
Identity = 93/195 (47.69%), Postives = 132/195 (67.69%), Query Frame = 0
Query:   55 EEGYYAHLGCYMDKEDDRVLGMKLVRDDMTAELCHEYCNVRGAFFMATQYGNECFCSEEGDLDYDRHSIGVCDMSCAGDDSERCGGFYAFDLYELVWPDTPTDLEYMDCYADDAEDSIMSN-MYASDDMTSAVCRDHCKENNALYYATQFGNECWCGTSDVFADYEKHGKGTCHIRCAGDTSTACGGLYAFSLYR 248
            EEGY +++GC+ D +DDRV         MT  +C EYC  R A FMATQ+G EC+CS + +++YDRHS GVCD  C G+ ++ CGGF AFDLY++  P  PT  EY+ C+ADD ED ++ + +    DMT  VCR +C+E +A +YATQ+G+ECWCG S+   DY++HG+G+C   C+GD + ACG  +   +Y+
Sbjct:    8 EEGY-SYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYK 201          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig920.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBW3_9PHAE1.970e-13948.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LGP4_ECTSI2.470e-13143.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRE8_ECTSI1.470e-7253.18EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LRN1_ECTSI9.490e-7060.11Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D8LHU1_ECTSI1.010e-6556.91Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6H5JJ37_9PHAE1.080e-6551.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F2Z7J0_9FLOR4.520e-5954.10Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
D8LED7_ECTSI1.310e-5846.19EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A2V3ISL2_9FLOR2.040e-5753.30Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
A0A6H5JMV6_9PHAE2.360e-5747.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 157..250
e-value: 3.3E-4
score: 28.4
coord: 58..150
e-value: 0.02
score: 9.2
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 62..140
e-value: 3.8E-14
score: 52.6
coord: 160..240
e-value: 4.6E-13
score: 49.2
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 58..150
score: 9.266253
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 157..250
score: 9.476024
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 385..462
e-value: 2.2E-6
score: 29.7
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 280..383
e-value: 9.9E-18
score: 66.3
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 283..404
NoneNo IPR availablePANTHERPTHR24269KREMEN PROTEINcoord: 62..146
NoneNo IPR availablePANTHERPTHR24269KREMEN PROTEINcoord: 149..359
NoneNo IPR availablePANTHERPTHR24269:SF16PROTEIN CBG14225coord: 149..359
NoneNo IPR availablePANTHERPTHR24269:SF16PROTEIN CBG14225coord: 62..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig920contigA-nodosum_M_contig920:163584..172970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig920.3.1mRNA_A-nodosum_M_contig920.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig920 162458..174326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig920.3.1 ID=prot_A-nodosum_M_contig920.3.1|Name=mRNA_A-nodosum_M_contig920.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=463bp
MTMTRITTLLTCFAPTVLLAAAPPGSLRRPQEDTKATVIAPRRLPTSDLE
PAVDEEGYYAHLGCYMDKEDDRVLGMKLVRDDMTAELCHEYCNVRGAFFM
ATQYGNECFCSEEGDLDYDRHSIGVCDMSCAGDDSERCGGFYAFDLYELV
WPDTPTDLEYMDCYADDAEDSIMSNMYASDDMTSAVCRDHCKENNALYYA
TQFGNECWCGTSDVFADYEKHGKGTCHIRCAGDTSTACGGLYAFSLYRFI
DESPEPTSEPASDSTEEVGSVNFENTYPFDGTTFSGDGTYYGETSSGNCA
IMPIPSMYSGMIPVALNAGQYGGSEMCGACIEGEGSGNGAGSDPITGTFK
AYVMDKCPECSTGDLDFSKSGDGRWDISWKFVACPGSDKPSFIFEGSHEY
FWKIQPRGTKTPVTELTVDGASGTKTDDNFFEIPGAPYPLYGAQTVKTTT
MLGKTATQEVSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR036749Expansin_CBD_sf
IPR036908RlpA-like_sf