prot_A-nodosum_M_contig92.49.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig92.49.1
Unique Nameprot_A-nodosum_M_contig92.49.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length444
Homology
BLAST of mRNA_A-nodosum_M_contig92.49.1 vs. uniprot
Match: A0A6H5K9J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J0_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 1.750e-101
Identity = 184/340 (54.12%), Postives = 233/340 (68.53%), Query Frame = 0
Query:  118 AVSLLLHDQPMSFGGRQPLTSHAARWLIRRSIKSRCKASAALRVKVEARSNLGAMFGRFDTVSVEFQELIFDDVQITGGARFELLGVDFLTPGLLPGPMRRLRRLRRPCEVSGTSELTEADLAQSPAIRRLAQRVISLALRPRIRKGDTNS-------------VGSVTSRARGSSTAGGHGASARDGWGEVWGQQSVHVSRVRVNGSKLVVEGEVTTGGRFLGPFLELPFRFEFSLSASRDGHVVHLKDPSVYWGTADGEHVALPMLPLQSFKIDLGDRSKIELLRVSGGRLTVGGRFILSPVSPLTVS-PGFSRGKIQHDLSETLSDTICNVLRLRRD 443
            AVS+LLHD+P+SFGGR+P TSHAARW I+R I S  KASAAL V+VEAR+N  AM GR++++S++F + IF+D+Q++GGA FELLGVD LT GLLPGP RRLRRLRRPCE  G S  T+ D+A SPAIRRLAQRV++ AL+PR ++    +                               A +    G +  + SV V  VRV+G+KL +EGE+T GG FL     +PFR+ FSLSAS+DGHV++ K  SVYWGT  G HV LPM+PLQSFKIDLGDR++IE LR+S G L+VGGRFIL+     TV+ PG  RG I +DL+E LS  + N L LRR+
Sbjct:   98 AVSVLLHDEPISFGGRRPFTSHAARWFIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGA-FELLGVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALQPRAKRAGVVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAQQQGRL--EPSVSVLGVRVHGNKLAIEGEMTNGGTFL----RVPFRYHFSLSASQDGHVLYFKGSSVYWGTPGG-HVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSVGGRFILTNTPGFTVALPGLKRGDINYDLAEGLSRLVSNCLNLRRE 429          
BLAST of mRNA_A-nodosum_M_contig92.49.1 vs. uniprot
Match: D8LB91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB91_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 1.240e-100
Identity = 183/345 (53.04%), Postives = 231/345 (66.96%), Query Frame = 0
Query:  119 VSLLLHDQPMSFGGRQPLTSHAARWLIRRSIKSRCKASAALRVKVEARSNLGAMFGRFDTVSVEFQELIFDDVQITGGARFELLGVDFLTPGLLPGPMRRLRRLRRPCEVSGTSELTEADLAQSPAIRRLAQRVISLALRPRIRKGDT-------------------NSVGSVTSRARGSSTAGGHGASARDGWGEVWGQQSVHVSRVRVNGSKLVVEGEVTTGGRFLGPFLELPFRFEFSLSASRDGHVVHLKDPSVYWGTADGEHVALPMLPLQSFKIDLGDRSKIELLRVSGGRLTVGGRFILSPVSPLTVS-PGFSRGKIQHDLSETLSDTICNVLRLRRD 443
            VS+LLHD+P+SFGGR+P TSHAARW I+R I S  KASAAL V+VEAR+N  AM GR++++S++F + IF+D+Q++GGA FELLGVD LT GLLPGP RRLRRLRRPCE  G S  T+ D+A SPAIRRLAQRV++ ALRPR ++                        +                  S +   G    + SV V  VRV+G+KL +EGE+T GG FL     +PFR+ FSLSAS DGHV++ K  SVYWGT  G HV LPM+PLQSFKIDLGDR++IE LR+S G L++GGRFIL+     TV+ PG  RG I +DL+E+LS  + N L LRR+
Sbjct:    3 VSVLLHDEPISFGGRRPFTSHAARWFIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGA-FELLGVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALRPRAKRAAVAXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXSEQQQGGL---EPSVSVLGVRVHGNKLAIEGEMTNGGTFL----RVPFRYHFSLSASADGHVLYFKGSSVYWGTPGG-HVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSLGGRFILTNTPGFTVALPGLKRGDINYDLAESLSRLVSNCLNLRRE 338          
BLAST of mRNA_A-nodosum_M_contig92.49.1 vs. uniprot
Match: A0A6H5K8F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F0_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.550e-32
Identity = 92/307 (29.97%), Postives = 156/307 (50.81%), Query Frame = 0
Query:  133 RQPLTSHAARWLIRRSIKSRCKASAALRVKVEARSNLGAMFGRFDTVSVEFQELIFDDVQITGGARFELLGVDFLTPGLLPGPMRRLRRLRRPCEVSGTSELTEADLAQSPAIRRLAQRVISLALRPRIRKGDTNSVGSVTSRARGSSTAGGHGASARDGWGEVWGQQSVHVSRVRVNGSKLVVEGEVTTGGRFLGPFLELPFRFEFSLSASRDGHVVHLKDPSVYWGTADGEHVALPMLPLQSFKIDLGDRSKIELLRVSGGRLTVGGRFILSPVSPLTVSPGFSRGKIQHDLSETLSDTICNVLR 439
            + PL S    W++ R+I +R      L V V+ARSN  AM G   +V + F  L  +++QI+GGAR  +  +D     LL    +R    ++P E+ G+  LT  DL+ S  +RRL   +++  LR    K +T +                          E   + S+ +++V    S+LV+EGE+           ++PF +  S+     GHVV+LKD  V+W    G  ++LP+LPL++F +D+G+ ++IE +R+  G++ +  R ++SP  PL V+    R   + D++E LS T  N+++
Sbjct:  494 KDPLWSKILVWVLERAITNRAMLVEGLEVSVDARSNREAMSGLLQSVGITFNHLELENLQISGGARMNITNLDLKVMTLL---WKRFGSFKKPFEIEGSYVLTSEDLSTSSIVRRLVTNMMNSTLR----KLETLAT-------------------------EPLRKSSITITQVSAKRSRLVIEGEMAYDSA------KVPFTYRTSIGVKGKGHVVYLKDAEVFWENIGGS-LSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASVRKRAAFRFDVAERLSVTFGNLVQ 761          
BLAST of mRNA_A-nodosum_M_contig92.49.1 vs. uniprot
Match: D7G8F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F0_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 3.970e-22
Identity = 71/254 (27.95%), Postives = 129/254 (50.79%), Query Frame = 0
Query:  186 LIFDDVQITGGARFELLGVDFLTPGLLPGPMRRLRRLRRPCEVSGTSELTEADLAQSPAIRRLAQRVISLALRPRIRKGDTNSVGSVTSRARGSSTAGGHGASARDGWGEVWGQQSVHVSRVRVNGSKLVVEGEVTTGGRFLGPFLELPFRFEFSLSASRDGHVVHLKDPSVYWGTADGEHVALPMLPLQSFKIDLGDRSKIELLRVSGGRLTVGGRFILSPVSPLTVSPGFSRGKIQHDLSETLSDTICNVLR 439
            ++ + ++I+GGAR  +  +D     LL    +R    ++P E+ G+  LT  DL+ S  +RRL   +++  LR    K +T +                          E   + S+ +++V    S+LV+EGE+           ++PF +  S+     GHVV+LKD  V+W    G  ++LP+LPL++F +D+G+ ++IE +R+  G++ +  R ++SP  PL V+    R   + D++E LS T  N+++
Sbjct:  288 MLVEGLEISGGARMNITNLDLKVMTLL---WKRFGSFKKPFEIEGSYVLTSEDLSTSSMVRRLVTNMMNSTLR----KLETLAT-------------------------EPLRKSSITITQVLAKRSRLVIEGEMAYDSA------KVPFTYRTSIGVKGKGHVVYLKDAEVFWENVGGS-LSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASLRKRAAFRFDVAERLSVTFGNLVQ 502          
BLAST of mRNA_A-nodosum_M_contig92.49.1 vs. uniprot
Match: A0A4D9D3X5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.900e-17
Identity = 76/301 (25.25%), Postives = 128/301 (42.52%), Query Frame = 0
Query:  133 RQPLTSHAARWLIRRSIKSRCKASAALRVKVEARSNLGAMFGRFDTVSVEFQELIFDDVQITGGARFELLGVDFLTPGLLPGPMRRLRRLRRPCEVSGTSELTEADLAQSPAIRRLAQRVISLALRPRIRKGDTNSVGSVTSRARGSSTAGGHGASARDGWGEVWGQQSVHVSRVRVNGS-KLVVEGEVTTGGRFLGPFLELPFRFEFSLSASRDGHVVHLKDPSVYWGTADGEHVALPMLPLQSFKIDLGDRSKIELLRVSGGR-LTVGGRFILSPVSPLTVSPGFSRGKIQHDLSETLS 431
            R+P+ S     L  + ++   +    L V V ARSN   + G    V  +F  ++ +++QI+GG R E+ G++     LL    RRL  +R+P EV G   LT+ D++ S  IR + Q +++  LR                                           V +  VR++   KL V G         G    +PF     +  + DGH+V+L DP +         V +P+  +++F +D+GD ++IE L +   R +TV  R +++P  P  V+    R    +D+    S
Sbjct:    4 RKPILSTVVEVLASKLVRKTARRVTGLDVDVGARSNSDVLAGNLPLVKAKFSRIVLENLQISGGGRMEITGLNIRLLALLLA--RRLSLIRKPFEVCGEYVLTQQDVSASKLIRDMVQLLVNNVLRTLFPSLHLTFF-------------------------------DVSIDSVRISPRRKLAVHGTANVAESASG----MPFTLLTGVGLAGDGHIVYLDDPELVLNPKAPLPVKVPLGSIRAFDVDIGDNARIERLEIDEARGVTVTARTLITPAPPFQVTDVGKRAAFLYDMGAFFS 267          
BLAST of mRNA_A-nodosum_M_contig92.49.1 vs. uniprot
Match: W7TXL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXL0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.310e-17
Identity = 77/305 (25.25%), Postives = 129/305 (42.30%), Query Frame = 0
Query:  129 SFGGRQPLTSHAARWLIRRSIKSRCKASAALRVKVEARSNLGAMFGRFDTVSVEFQELIFDDVQITGGARFELLGVDFLTPGLLPGPMRRLRRLRRPCEVSGTSELTEADLAQSPAIRRLAQRVISLALRPRIRKGDTNSVGSVTSRARGSSTAGGHGASARDGWGEVWGQQSVHVSRVRVNGS-KLVVEGEVTTGGRFLGPFLELPFRFEFSLSASRDGHVVHLKDPSVYWGTADGEHVALPMLPLQSFKIDLGDRSKIELLRVSGGR-LTVGGRFILSPVSPLTVSPGFSRGKIQHDLSETLS 431
            S   R+P+ S     L  + ++   +    L V V ARSN   + G    V  +F  ++ +++QI+GG R E+ G++     LL    RRL  +R+P EV G   LT+ D++ S  IR + Q +++  LR                                           V +  VR++   KL V G         G    +PF     +  + DGH+V+L DP +         V +P+  +++F +D+GD ++IE L +   R +TV  R +++P  P  V+    R    +D+    S
Sbjct:   91 SMSERKPILSTVVEVLASKLVRKTARRVTGLDVDVGARSNSDVLAGNLPLVKAKFSRIVLENLQISGGGRMEITGLNIRLLALLLA--RRLSLIRKPFEVCGEYVLTQQDVSASKLIRDMVQLLVNNVLRTLFPSLHLTFF-------------------------------DVSIDSVRISPRRKLAVHGTANVAESASG----MPFTLLTGVGLAGDGHIVYLDDPELVLNPEAPLPVKVPLGSIRAFDVDIGDNARIERLEIDEARGVTVTARTLITPAPPFQVTDVGKRAAFLYDMGAFFS 358          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig92.49.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K9J0_9PHAE1.750e-10154.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB91_ECTSI1.240e-10053.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8F0_9PHAE1.550e-3229.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8F0_ECTSI3.970e-2227.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D3X5_9STRA2.900e-1725.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXL0_9STRA5.310e-1725.25Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021373Protein of unknown function DUF2993PFAMPF11209LmeAcoord: 144..400
e-value: 1.2E-7
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig92contigA-nodosum_M_contig92:660054..674647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig92.49.1mRNA_A-nodosum_M_contig92.49.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig92 659685..675636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig92.49.1 ID=prot_A-nodosum_M_contig92.49.1|Name=mRNA_A-nodosum_M_contig92.49.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=444bp
MFLRHSRRSLIGLGTTLAIVGSPSPYSRVQALAEQGNAAAFVSCGAFLGR
KRAMGSKRVVLGLDVLIAPRRMTMNGRKISVLSCKHRQRCFRAVEGTFST
VPTCTRRATTAGAGALSAVSLLLHDQPMSFGGRQPLTSHAARWLIRRSIK
SRCKASAALRVKVEARSNLGAMFGRFDTVSVEFQELIFDDVQITGGARFE
LLGVDFLTPGLLPGPMRRLRRLRRPCEVSGTSELTEADLAQSPAIRRLAQ
RVISLALRPRIRKGDTNSVGSVTSRARGSSTAGGHGASARDGWGEVWGQQ
SVHVSRVRVNGSKLVVEGEVTTGGRFLGPFLELPFRFEFSLSASRDGHVV
HLKDPSVYWGTADGEHVALPMLPLQSFKIDLGDRSKIELLRVSGGRLTVG
GRFILSPVSPLTVSPGFSRGKIQHDLSETLSDTICNVLRLRRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021373DUF2993