prot_A-nodosum_M_contig92.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig92.14.1
Unique Nameprot_A-nodosum_M_contig92.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length371
Homology
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: D8LB66_ECTSI (Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 2.000e-139
Identity = 239/399 (59.90%), Postives = 263/399 (65.91%), Query Frame = 0
Query:    1 MEIDVGSSRCTAPALDIPLHRHYDPTDAEDAALRIDWAKFLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIHVLTSTGHDEPPLLDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAANVHGWDRRLRWFSPAI----KRRKRETEDGRGGRDGGGREWKQGTLNQTTVGVGGALPVADT--------------------GAAGIISLGQGSMTDYRDAAAGADGSTSKLLPS---LTANAKRDDGESCVLAARASKAPENAGRERDGGASRSGEEGD-TMTTPWWGLFDARDEEVELVCSELLALYRAHG 371
            MEIDVGS RC APAL IP +RHYDP+DAEDAALR++WAK LFRAGYRLR+PQ     TTGTAVLLFHRFLI+ERVGKHRR+RDVILTTCLFLAGKVTEAPRRLRDVINV+H+L STG DEPPLLDKAYW+MKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRL R  TRTAW + ND LFCPRALS   PAVACA IR+AA VHG DRRLRW+SP +    KRR+ E  D  GGRD G  E   G   +   G G                            G       GQ  +T                +     ++ N     G + VL            +  DGG     ++GD T T PWW LFDARDEEVELVCSELLALYRAHG
Sbjct:    1 MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQG----TTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESGMGDRGRGG-GTGXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGLXXXVNGQHVVTXXXXXXXXXXXXXXXTVGDHGGISGNQGGFAGGADVLVVGV--------KSSDGGRGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHG 386          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A835YQW0_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW0_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.920e-58
Identity = 108/195 (55.38%), Postives = 128/195 (65.64%), Query Frame = 0
Query:   29 EDAALRIDWAKFLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRD-VILTTCLFLAGKVTEAPRRLRDVINVIHVLTST---GHDEPPLLDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAANVHGWDRRLRWFS 219
            ED   R  W   +FRAG+RLRYPQ     TT TA++LFHRF   E     +R+R  V+L TCLFLAGKV E PRRLRDVIN +HV  +    G  EPP LD+AYW MKE++VE EQ +LR I F +D   PYRLLLNYARSLRLSR++ + AW  VND LF P AL  S P +ACAAI LAA +      L W +
Sbjct:   33 EDLRRRRGWTAAMFRAGHRLRYPQE----TTSTAIILFHRFCESEAQALRQRDRRLVVLVTCLFLAGKVRETPRRLRDVINCLHVTAAEPGGGAVEPPRLDQAYWDMKEQVVECEQAVLRIIGFDMDGEHPYRLLLNYARSLRLSRELVQLAWGFVNDFLFIPSALELSPPTLACAAISLAARLTDELNDLNWIT 223          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: W7TSF1_9STRA (Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.340e-30
Identity = 100/283 (35.34%), Postives = 133/283 (47.00%), Query Frame = 0
Query:   33 LRIDWAKFLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNR--DVILTTCLFLAGKVTEAPRRLRDVINVIHVLT------------------STGHDEPPL----------------------------------LDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRA-LSTSQPAVACAAIRLAANVHGWDRRLRWFSPAIKRRKRETEDGRGGRDGGGR---EWKQGTLNQTTVGVGG 257
            +R D  + L  AG RLR PQ     T  TA L+FHRF     + ++ RNR  DV+LTTCLFLA KV E PRR+RD IN ++V+                   S G D   L                                  LD+ YW +KE +V+ EQ++LR + F ++    YRLLLNYARSLR    +   AW+++NDSLF P   L+    A A AA+ LA          R  + A   R  E EDG  G+ GG +   +     + +T+ GVGG
Sbjct:   34 IRQDSVRVLLDAGRRLRLPQE----TIATAALIFHRFFAVRSLREYARNRRLDVVLTTCLFLASKVEEQPRRIRDAINCVYVVRKQLLAQAQGTRFVDTCAPSEGGDAETLSERGWVHGNGNGGAPGELKGNTDLARSVKGNILSLDRGYWDLKESVVDTEQLVLRILGFDLETFMSYRLLLNYARSLRARPVLVEVAWALLNDSLFSPACCLALPSHAQAVAALDLAQ---------RLLTAAGGDRDGENEDGPPGQRGGLKLAIDKDMAPIRETSTGVGG 303          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A0G4IYJ5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYJ5_PLABS)

HSP 1 Score: 115 bits (288), Expect = 2.160e-26
Identity = 79/211 (37.44%), Postives = 107/211 (50.71%), Query Frame = 0
Query:   25 PTDAEDAALRIDWAKFLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIHVLTSTGHDEPPL-LDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAA---NVHGWDRRLRWFSPAIKRRKRETED 231
            P D E + +R      +   G RL+ PQ     T  TA  +FHRF  KE +  H  +   I  TCLF+AGK  E PRRLRDVIN ++   +   D PPL +   +W MKE ++E E+++LR I F VD   P+   +++ R LR S D+     SI+NDS   P  L      +AC A+ LA    +V   D    WF P     + E ED
Sbjct:    3 PAD-EGSVIRFQATTLIQDVGIRLQVPQ----MTIATAQTIFHRFFAKEPLADH--DPMDIAQTCLFVAGKSQETPRRLRDVINTVYRYRNP--DLPPLEVADPFWQMKEHLIESERLVLRVIAFDVDVVPPHAYAVHFLRDLRASNDLANCTLSILNDSCRIPLCLHYEPHVIACGAMYLATELLSVRPGDGDDEWF-PNYGAHRAEVED 203          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A0L0S947_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S947_ALLM3)

HSP 1 Score: 115 bits (289), Expect = 4.890e-26
Identity = 75/183 (40.98%), Postives = 104/183 (56.83%), Query Frame = 0
Query:   33 LRIDWAKFLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIH--VLTSTGHDEPPLLD---KAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRD-VTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAANVH 209
            LRI     + RAG  L  PQ    F+ GTA +L HRF     + K    RD++L   LFLA K+ E PRR+RD+INV+H  VL   GH +PP+LD     Y  ++  ++  E  LL+ + F V    P+  L+NY +++RL+R  + +TAW+ VNDS   P         VACAAI+LAA+ H
Sbjct:   36 LRILACDLIQRAGRALSIPQ----FSVGTAQVLLHRFYFAASLKKFGV-RDMVLGA-LFLATKLEETPRRMRDIINVVHHAVLLQQGHPDPPMLDVHGMEYADLERAMMRAEMYLLKYLAFHVHVAHPHMWLVNYLQAMRLARPPLAQTAWNYVNDSYRLPLLCMVQPHVVACAAIQLAADDH 212          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A7S0I6B2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6B2_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 7.550e-24
Identity = 62/167 (37.13%), Postives = 97/167 (58.08%), Query Frame = 0
Query:   40 FLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIHVLTSTGHDEPPLLDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAA 206
            FL  AG +LR PQ     +  TA++ +HRF  ++    + R R  I TTCLFLAGKV E P++++DV+   +         P    K +W++KE I+  E++LL+T++F +     YR LL Y +S++ +RD+ + AW+ +NDSL    AL      VA +A+ LA+
Sbjct:   88 FLQEAGQKLRLPQ----LSIATAIVFYHRFYSRKSYDSYDRFR--IATTCLFLAGKVEETPKKIKDVVIEAYKAQHQKPTGPEPESKEFWALKEEILVCERILLQTLDFDLTVEHAYRPLLAYVKSIKGTRDLAQVAWNFINDSLRTTIALQYPPRCVAASAVHLAS 248          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A7S1CMQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMQ2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.950e-24
Identity = 72/172 (41.86%), Postives = 89/172 (51.74%), Query Frame = 0
Query:   14 ALDIPLHRHYDPTDAEDAALRIDWAKFLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIHVLTSTGHDEPPL-LDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSL 184
            AL     RH D T  ED  LR     F    G  L  PQ     T   AV   HRF I     KH  +  V+ T CLFLA KV E PRRLRDV+N    +  +  D PPL LDKAYW +KE +V  EQ++LR + F      P R +LN +R+L L   V + A ++ ND+L
Sbjct:   24 ALAAAAARHADVTPEEDRTLRRACWAFACDVGLGLDVPQN----TVAAAVQFCHRFFIVNSFRKH--DPYVVSTACLFLACKVEETPRRLRDVLNCAWAVRYS--DAPPLALDKAYWHLKEVMVSTEQLVLRALAFATRVEAPSRWILNLSRALDLDNGVVQVALALANDAL 187          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A7S0PZF2_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZF2_9EUKA)

HSP 1 Score: 110 bits (275), Expect = 1.210e-23
Identity = 62/167 (37.13%), Postives = 96/167 (57.49%), Query Frame = 0
Query:   40 FLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIHVLTSTGHDEPPLLDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAA 206
            FL  +G +LR PQ     T  TA++ +HRF   +    +  +R  I TTCLFLA KV E P++L+DV+   + + +     P    + +  +KERI+  E+VLL+T+ F +    PYR LL Y +S++ +RD+ + AW+ +NDSL     L  +   V+ AA+ LAA
Sbjct:   62 FLQESGQKLRLPQ----LTIATAIVFYHRFFAHKSYEGY--DRFTIATTCLFLASKVEETPKKLKDVVTETYKIQNAPKAAPEPESQDFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSIQGTRDLAQVAWNFINDSLRTTICLQYAPRCVSAAAVALAA 222          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A7S0J0B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J0B8_9EUKA)

HSP 1 Score: 108 bits (271), Expect = 4.790e-23
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 0
Query:   40 FLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIHVLTSTGHDEPPLLDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAA 206
            FL  +G +LR PQ     T  TA++ +HRF   +      R    I TTCLFLA KV E P++L+DV+     + +T    P    + +  +KERI+  E+VLL+T+ F +    PYR LL Y +S++ +RD+ + AW+ +NDSL     L  +   V+ AA+ LAA
Sbjct:   64 FLQESGQKLRLPQ----LTIATAIVFYHRFFAHKSYESFCR--FTIATTCLFLASKVEETPKKLKDVVIETFKIQNTPKPPPEPDSQEFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSIQGTRDLAQVAWNFINDSLRTTICLQYAPRCVSAAAVSLAA 224          
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Match: A0A7S3TKL7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TKL7_9SPIT)

HSP 1 Score: 104 bits (260), Expect = 1.330e-21
Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 0
Query:   40 FLFRAGYRLRYPQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAPRRLRDVINVIHVLTSTGHDEPPLLDKAYWSMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACAAIRLAAN 207
            F+   G  LR PQ     T  TA++ +HRF   +   +H  +R  I TT LFLA KV E PR+L+DV+   +    TG   P    +  +  +E+++  E++LL+T+ F +    PYR LL Y +S+  +RD+ + AW+ +NDSL     L  S   VA AA+ LAA+
Sbjct:   58 FIQDTGRNLRLPQ----LTIATAMVFYHRFFAFKSYEEH--DRFNIATTALFLASKVEETPRKLKDVVIEAYKTQHTGAKVPEPESRDLYERREKVLISERILLQTLGFDLSIEHPYRPLLGYVKSITGTRDLAQIAWNFINDSLRTTVCLQYSPRYVAAAALSLAAD 219          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig92.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB66_ECTSI2.000e-13959.90Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_... [more]
A0A835YQW0_9STRA1.920e-5855.38Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
W7TSF1_9STRA2.340e-3035.34Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A0G4IYJ5_PLABS2.160e-2637.44Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A0L0S947_ALLM34.890e-2640.98Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A7S0I6B2_9EUKA7.550e-2437.13Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S1CMQ2_9STRA9.950e-2441.86Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0PZF2_9EUKA1.210e-2337.13Hypothetical protein n=2 Tax=Coccolithus braarudii... [more]
A0A7S0J0B8_9EUKA4.790e-2337.72Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S3TKL7_9SPIT1.330e-2136.90Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 39..144
e-value: 8.8E-6
score: 35.2
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 33..114
e-value: 5.31278E-9
score: 50.7001
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 153..210
e-value: 0.00615392
score: 33.7513
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 32..150
e-value: 5.4E-11
score: 42.3
NoneNo IPR availableGENE3D1.10.472.10coord: 14..150
e-value: 2.6E-28
score: 100.7
NoneNo IPR availableGENE3D1.10.472.10coord: 153..243
e-value: 5.1E-11
score: 44.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..240
IPR043198Cyclin/Cyclin-like subunit Ssn8PANTHERPTHR10026CYCLINcoord: 24..368
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 155..370
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 20..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig92contigA-nodosum_M_contig92:223344..227583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig92.14.1mRNA_A-nodosum_M_contig92.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig92 223344..227583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig92.14.1 ID=prot_A-nodosum_M_contig92.14.1|Name=mRNA_A-nodosum_M_contig92.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=371bp
MEIDVGSSRCTAPALDIPLHRHYDPTDAEDAALRIDWAKFLFRAGYRLRY
PQAGDNFTTGTAVLLFHRFLIKERVGKHRRNRDVILTTCLFLAGKVTEAP
RRLRDVINVIHVLTSTGHDEPPLLDKAYWSMKERIVEFEQVLLRTINFQV
DPPDPYRLLLNYARSLRLSRDVTRTAWSIVNDSLFCPRALSTSQPAVACA
AIRLAANVHGWDRRLRWFSPAIKRRKRETEDGRGGRDGGGREWKQGTLNQ
TTVGVGGALPVADTGAAGIISLGQGSMTDYRDAAAGADGSTSKLLPSLTA
NAKRDDGESCVLAARASKAPENAGRERDGGASRSGEEGDTMTTPWWGLFD
ARDEEVELVCSELLALYRAHG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR043198Cyclin/Ssn8
IPR036915Cyclin-like_sf