prot_A-nodosum_M_contig9144.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9144.6.1
Unique Nameprot_A-nodosum_M_contig9144.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length83
Homology
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BLAST of mRNA_A-nodosum_M_contig9144.6.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 4.180e-21
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 0 
Query:    1 MVNEAELAALAVGSTTGVLVDIGESGFSVTPIFGGCPIAPGARWEACGGADLTEYMDSMLHSRANEAFNQM 71
            MVNEA+LAALAVG   GV+VDIGESG SVTPIF G P+ P  R E CGG D+T+++D ML SR NE FNQM
Sbjct:  789 MVNEAQLAALAVGVKVGVIVDIGESGVSVTPIFDGFPVPPAVRSECCGGGDVTKFLDYMLLSRTNEHFNQM 859
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BLAST of mRNA_A-nodosum_M_contig9144.6.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 4.220e-21
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 0 
Query:    1 MVNEAELAALAVGSTTGVLVDIGESGFSVTPIFGGCPIAPGARWEACGGADLTEYMDSMLHSRANEAFNQM 71
            MVNEA+LAALAVG   GV+VDIGESG SVTPIF G P+ P  R E CGG D+T+++D ML SR NE FNQM
Sbjct: 1414 MVNEAQLAALAVGVKVGVIVDIGESGVSVTPIFDGFPVPPAVRSECCGGGDVTKFLDYMLLSRTNEHFNQM 1484
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BLAST of mRNA_A-nodosum_M_contig9144.6.1 vs. uniprot
Match: D8LK63_ECTSI (Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK63_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 2.380e-6
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0 
Query:    7 LAALAVGSTTGVLVDIGESGFSVTPIFGGCPIAPGARWEACGGADLTEYMDSMLHSR 63
            LA  A G T+G++VDIGESG  V PIF G  +  G RW   GG D+T ++ ++++++
Sbjct:  472 LALYACGPTSGLVVDIGESGTQVAPIFDGFVLETGIRWVGLGGKDITRHLAALVNAK 528
[Close]
BLAST of mRNA_A-nodosum_M_contig9144.6.1 vs. uniprot
Match: A0A6H5JMD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD8_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 4.270e-6
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:   11 AVGSTTGVLVDIGESGFSVTPIFGGCPIAPGARWEACGGADLTEYMDSMLHSR 63
            A G T+G++VDIGESG   TPIF G  +  G RW   GG D+T ++ ++++++
Sbjct:  153 ACGPTSGLVVDIGESGTQATPIFDGFVVETGIRWVGLGGKDITRHLAALVNAK 205
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9144.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JDL2_9PHAE4.180e-2167.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHM1_ECTSI4.220e-2167.61TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus sil... [more]
D8LK63_ECTSI2.380e-643.86Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JMD8_9PHAE4.270e-643.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.640.10Actin; Chain A, domain 4coord: 47..67
e-value: 1.8E-10
score: 42.0
NoneNo IPR availableGENE3D3.30.420.40coord: 5..46
e-value: 1.8E-10
score: 42.0
IPR004000Actin familyPFAMPF00022Actincoord: 2..76
e-value: 7.6E-11
score: 41.3
IPR043129ATPase, nucleotide binding domainSUPERFAMILY53067Actin-like ATPase domaincoord: 15..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9144contigA-nodosum_M_contig9144:9570..9818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9144.6.1mRNA_A-nodosum_M_contig9144.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9144 8995..9833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9144.6.1 ID=prot_A-nodosum_M_contig9144.6.1|Name=mRNA_A-nodosum_M_contig9144.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=83bp
MVNEAELAALAVGSTTGVLVDIGESGFSVTPIFGGCPIAPGARWEACGGA
DLTEYMDSMLHSRANEAFNQMVRVRVKSAVTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR043129ATPase_NBD