prot_A-nodosum_M_contig91.29.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig91.29.2
Unique Nameprot_A-nodosum_M_contig91.29.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length530
Homology
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE)

HSP 1 Score: 554 bits (1427), Expect = 5.450e-191
Identity = 339/565 (60.00%), Postives = 389/565 (68.85%), Query Frame = 0
Query:    1 MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQV---YVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPTVPRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFEDDFHYRGRAVEKAVAER--SGGKXXXXXXXXXXTSSNKAVQLLYTKNWRGEEVVVEIEQSDDEDXXXXXXEEAA--------------VLFPSRAAIRRKAAEQAAKEERAAKRVKKALPTFLSGSNISGEPGGXXXXXXXXXXXXXEWDEDDGDSSDETAPNGKSGDDTAAAHARRLGVANVTSLEERDEMKKKLLPWTEHMKQVWRRQQAELEDASGSGEDGGSDPWWKHEDGD----------------AAPNSG-GGRRRSLGGRLGPGVMFRVGGRYVTMDAVTNEDAAKMSPDEYTRFYNLAVSQRG 529
            M DM+AI+ALQKAERLVAT+ARAFYTD TVLVVDTL+REKYIKD DE+LGSRLNL+P+QVR+A+AELL+EG AAKE MSD++YSGR+S YW+IDLRHAVNVILLRV  MKE+LSQRQEAKAA Q    YVCPRCHEKFEVMDI KLSNGD SFCCSHCCPNDDHSGC +GSGYTL +F+DK+GLDSVT LI  LNEQLG+STDP VPRESI+EL+H+LRDTVVP+NLPSQLR+RGMGGQQRGD SSAHARF+DDFH+RGRA +KA AER  +GG+           +S++ VQ+LYTKNWRGEEVVVEIEQS    XXXXXX                  +L PSRAA++RKAA+          R KKALPTFL GS ISG       XXXXXXXXXX                           ARRLGVA VTS+ ERDEMKK+L PWTE MKQVWRRQQ                                          AP +    R   L   +G G  FRVG R+V ++A+T ED AKMS ++YTRFYN+ V + G
Sbjct:    1 MADMNAIVALQKAERLVATIARAFYTDITVLVVDTLIREKYIKDKDEDLGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQALPTYVCPRCHEKFEVMDIYKLSNGDRSFCCSHCCPNDDHSGCKKGSGYTLEDFNDKKGLDSVTALIGQLNEQLGESTDPAVPRESIFELVHSLRDTVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGR-----------ASSRPVQVLYTKNWRGEEVVVEIEQSXXXXXXXXXXXAEGXXXXXXXXXXXXXGLLLPSRAALKRKAADAXXXXXXXXXRAKKALPTFLKGSAISGNYNNTADXXXXXXXXXX-------------XXXXXXXXXXXXXXARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGAPQARTSARLLGLSAGVGAGQRFRVGVRFVPIEALTEEDIAKMSAEDYTRFYNVVVGEGG 541          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: A0A836CC40_9STRA (TFIIE alpha subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC40_9STRA)

HSP 1 Score: 229 bits (584), Expect = 3.390e-64
Identity = 146/374 (39.04%), Postives = 191/374 (51.07%), Query Frame = 0
Query:    3 DMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPTVPRESIYELIHA----------------------------------------------------------------LRDTVVPTNLPSQLRERGMGGQQRGDTSSAH-ARFEDDFHYRGRAVEKAVAERSGGKXXXXXXXXXXTSSNKAVQLLYTKNWRGEEVVVEIEQSDDED 311
            D+  I  LQ+AE+LV+TV RAF+ D  VLV+DTL+REKY+KD D++LG+RL L+P+QVRA +A L  EGLA +E+M D+   GR + YW++D RHAVNVI LR   M+  L + + A+ ARQ Y CP+C   F V++I KL NG   FCCSHCC  D H  C RG  ++L +F +++ L +VT  +  L EQL  S  P   R  +Y+L+                                                                  L D  VP+NLPS+LR RG+GG  RG   ++  ARF DD   R        A   GG             SN+AV LLY +N  G EVVVEIE   D D
Sbjct:    6 DIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGP-HSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDD---RFSLHAGYAAGTKGGDGAH--------GSNRAVDLLYARNAAGYEVVVEIESDSDAD 367          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: D8LCF1_ECTSI (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF1_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.060e-56
Identity = 100/124 (80.65%), Postives = 115/124 (92.74%), Query Frame = 0
Query:    1 MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQ 124
            M DM+AI+ALQKAERLV+T+ARAFYTD TVLVVDTL+REKYIKD DEELGSRLNL+P+QVR+A+AELL+EG AAKE MSD++YSGR+S YW+IDLRHAVNVILLRV  MKE+LSQRQEAKAA Q
Sbjct:    1 MADMNAIVALQKAERLVSTIARAFYTDITVLVVDTLIREKYIKDKDEELGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQ 124          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: D8LCF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF2_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.170e-50
Identity = 153/351 (43.59%), Postives = 180/351 (51.28%), Query Frame = 0
Query:  203 VPRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFEDDFHYRGRAVEKAVAER--SGGKXXXXXXXXXXTSSNKAVQLLYTKNWRGEEVVVEIEQSDD-----EDXXXXXXEEAAVLFPSRAAIRRKAAEQAAKEERAAKRVKKALPTFLSGSNISGEPGGXXXXXXXXXXXXXEWDEDDGDSSDETAPNGKSGDDTAAAHARRLGVANVTSLEERDEMKKKLLPWTEHMKQVWRRQQAELEDASGSGEDGGSDPWWKHEDGD----------------AAPNS-GGGRRRSLGGRLGPGVMFRVGGRYVTMDAVTNEDAAKMSPDEYTRFYNLAVSQRG 529
            VPRESI+EL+H+LRD VVP+NLPSQLR+RGMGGQQRGD SSAHARF+DDFH+RGRA +KA AER  +GG+           +S++ VQ+LYTKNWRGEEVVVEIEQS+D     ED      E                                                 XXXXXXXXXXXXX                          HARRLGVA VTS+ ERDEMKK+L PWTE MKQVWRRQQ+                                         AP +    R   L   +G G  FRVG R+V ++A+T ED AKMS ++YTRFYN  V +RG
Sbjct:    4 VPRESIFELVHSLRDIVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGR-----------ASSRPVQVLYTKNWRGEEVVVEIEQSEDXXXXXEDWDAEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXLQHARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGAPQARSSARLLGLSAGVGAGQRFRVGVRFVPIEALTEEDIAKMSAEDYTRFYNAVVGERG 341          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: A0A4D9CU86_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU86_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.090e-30
Identity = 83/242 (34.30%), Postives = 127/242 (52.48%), Query Frame = 0
Query:   10 LQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPT--VPRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFE 249
            L+ A+RLV  VARAFY D TV+V+D L+R +++KD+D  + +RL +  +Q R  + ELL E L   E + D+L +G+   +++ID  H  NV+  R+  M   L + +      Q Y CP C     ++++  L N    FCC  CC ++ H+ C  GS + L       G + V  L + +  Q+  +   T   P + IY L+ AL    +P+NLPS+L   G+GG   G T     R E
Sbjct:   33 LELAKRLVRAVARAFYADDTVVVLDALVRGRHVKDTD--IDTRLGVGAKQARRLLTELLEERLIKTEDVVDEL-TGKRELFYYIDFSHFTNVVRYRIHLMHRELERMEREANDNQTYECPVCGRALPLLEVQPLRNKRYGFCCPTCCLSELHATC-EGSQWQLRPKSGVTGFEEVQALKEKMRAQMYGAASETSAAPHDGIYNLLSALEHKPLPSNLPSELIAVGVGGLPAGGTELQRRRRE 270          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: A0A482S8Q7_9ARCH (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8Q7_9ARCH)

HSP 1 Score: 130 bits (328), Expect = 9.250e-30
Identity = 78/230 (33.91%), Postives = 129/230 (56.09%), Query Frame = 0
Query:    1 MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYW---FIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPTVPRESIYELIHALRDTVVPTNLPSQ 227
            MT  +A  AL  AE+L+AT+ARAFY D  V+V+D L+REKY+   D E+G RL +  + VR  + +L +E L   E +      G  + +W   ++D +  VN++  RV  M++ L++++ ++ +   Y CP C   F  +D  KL + D  F CSHCCP+++         +TL+E  +++ + S+      ++EQ  K  D  +    I+EL+  L+D  +P NLPS+
Sbjct:    1 MTTTAARQALDLAEQLIATIARAFYPDDVVVVLDALVREKYL--IDREIGPRLKMSEKDVRKVINQLETEMLIKAEDVP----LGDGASFWHCYYVDYQVFVNIVRYRVFLMQQRLNKQESSELSEVQYKCPTCKNVFSSLDALKLLSSDHKFICSHCCPHENCRTLPAEPYFTLIEIDNRRKISSLQTQQKKMSEQFCKDKDLHL---GIFELLSKLKDVQLPHNLPSE 221          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: A0A8K1C2Y0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2Y0_PYTOL)

HSP 1 Score: 117 bits (292), Expect = 1.660e-24
Identity = 74/232 (31.90%), Postives = 124/232 (53.45%), Query Frame = 0
Query:   14 ERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTS-EYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPR--CHEKFEVMDICKL-SNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPTVPRESIYELIHALRD-----TVVPTNLPSQLRERGMGGQ 236
            E+LV  + RAFY D  V+V+  L+REK++KD  +E+G+ +NL+ +QVR  M EL  + L  +E ++D+   G +S  YW+ID ++ V V+  R+  M+E L + ++ +  RQ Y C    C  ++  +++ +L   G   F C HC                L+E  +   L+ +  L   L +Q+ +       RE I+E++  + D      V+PTNLPS+ R  G+GG+
Sbjct:   18 EKLVNLIGRAFYADEHVVVLQALIREKFLKD--DEMGNAVNLQTRQVRKIMNELHQDMLVCEEVLNDKRLGGSSSTSYWYIDYKYFVEVVQYRLYVMQEHLKENEKLEIERQTYQCKNSDCGREYTALEVQRLLMPGQFQFRCGHC-------------NEVLLECDNNDRLEKIQALDRKLKDQMNRQAGM---REGIFEVLKRINDYVKEGNVLPTNLPSENRAAGIGGK 231          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: A0A6G0X257_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X257_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.140e-23
Identity = 77/234 (32.91%), Postives = 122/234 (52.14%), Query Frame = 0
Query:   11 QKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRT-SEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPR--CHEKFEVMDICKLSNGD-SSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPTVPRESIYELIHALRD-----TVVPTNLPSQLRERGMGG 235
            Q  E L   VARAFYTD  ++V++ LLREKY+KD  +E+G+ +NL+ +QVR    EL  + L  +E+++D+   G + + YW+ID ++ V+V+  R+  M+  L + +  +  RQ Y C    C  ++  ++  KL   D   F C HC                L+E  + + L SV  L+     Q+ K+ D     ESI E +  ++D       +P+NLPS+ R  G GG
Sbjct:    3 QLVENLAKIVARAFYTDEHIVVIEALLREKYLKD--DEMGNAVNLQTKQVRKICHELEIDHLVLREEVNDKNVGGASKATYWYIDYKYFVDVVRYRLFLMRTRLMENESLEIERQTYRCENDDCGREYTALEAQKLLTPDIHEFFCGHC-------------NSRLLECDNNERLRSVQGLLKKYTAQVNKAEDL---HESINECLKKIQDFFNSGQALPSNLPSENRAAGQGG 218          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: K3WPK9_GLOUD (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPK9_GLOUD)

HSP 1 Score: 111 bits (277), Expect = 1.250e-22
Identity = 75/231 (32.47%), Postives = 120/231 (51.95%), Query Frame = 0
Query:   14 ERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTS-EYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVC--PRCHEKFEVMDI-CKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPTVPRESIYELIHALRDTV-----VPTNLPSQLRERGMGG 235
            E+LV  V +AFY+D  V+V+  L+REK++KD  +E+GS +NL+ +QVR  M EL  + L  +E ++D+   G +S  YW+ID ++ V+V+  R+  M E L   ++ +  RQ + C  P C  ++  ++    L  G   F C HC                L+E  +   L+ +  L     +Q+ K        E IYE++  + D V     +PTNLPS+ R  G+GG
Sbjct:    6 EKLVHLVGQAFYSDEHVVVLRALIREKFLKD--DEMGSAVNLQTRQVRKIMNELHQDHLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYVMHEHLKDSEQLEIERQTFQCKDPDCGREYTALEAQLLLMPGQFQFRCGHC-------------NEPLLECDNNDRLEKIQSLQRKFKDQMNKQAGM---HEGIYEVLRRIGDFVKEGHILPTNLPSENRAAGLGG 218          
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Match: A0A7S1FY03_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY03_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.480e-22
Identity = 92/306 (30.07%), Postives = 146/306 (47.71%), Query Frame = 0
Query:   13 AERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSG-RTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCP-----RCHEKFEVMDICKLSNGD-SSFCCSHCCPND-DHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTDPTVP-RESIYELIHALRDTVVP--TNLPSQLRERGMGGQQRGDTSSAHARFEDDFHYRGRAVEKAVAERSGGKXXXXXXXXXXTSSNKAVQLLYTKNWRGEEVVVEIEQS 307
            AE LV+ VARAFY D TV ++D LLR+KY+++ D  +  RL+L  + +R  M  L  EGL   E++ D    G + +++W+ID  HAV VI LRV  M   L + +       +Y+CP      C+ ++   +  ++++     F C  C  N  ++      S YTL    + + L +    I  + EQL   T      R  I++L+  LR T  P  +NLPS+ R+ G+G ++   T             R   ++K    + GG             S+    L + KN RGEE+  E+E++
Sbjct:   21 AEHLVSLVARAFYQDETVAIIDVLLRDKYLREDD--MSKRLSLPGKMLRKFMEYLRDEGLVKVEEVDDLDTGGSQRTKFWYIDYNHAVKVIRLRVHLMMSKLEKAERMARGSSMYLCPGYATRACNGRYTEEEAQRVTDHQFGMFLCIECYNNHVNNPDPPPISQYTLKLVDNSKELKAAVANIKKVKEQLSSKTIGNFQLRYGIFDLLQLLRKTREPLSSNLPSENRDNGIGSKRIEGTG------------RTAFIKKKKQLKQGGHSMSDFGR-----SDDRADLTFLKNARGEEIAFEVEKN 307          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig91.29.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LCE2_9PHAE5.450e-19160.00HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A836CC40_9STRA3.390e-6439.04TFIIE alpha subunit-domain-containing protein n=1 ... [more]
D8LCF1_ECTSI2.060e-5680.65HTH TFE/IIEalpha-type domain-containing protein n=... [more]
D8LCF2_ECTSI1.170e-5043.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CU86_9STRA1.090e-3034.30HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A482S8Q7_9ARCH9.250e-3033.91HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A8K1C2Y0_PYTOL1.660e-2431.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0X257_9STRA5.140e-2332.91HTH TFE/IIEalpha-type domain-containing protein n=... [more]
K3WPK9_GLOUD1.250e-2232.47HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S1FY03_9STRA1.480e-2230.07Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 331..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..473
IPR002853Transcription initiation factor IIE subunit alpha, N-terminalSMARTSM00531tfiie3coord: 27..174
e-value: 8.8E-5
score: 25.7
IPR024550TFIIEalpha/SarR/Rpc3 HTH domainPFAMPF02002TFIIE_alphacoord: 15..115
e-value: 2.2E-10
score: 40.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 11..97
e-value: 7.3E-6
score: 27.7
IPR039997Transcription factor EPANTHERPTHR13097TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNITcoord: 8..400

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig91contigA-nodosum_M_contig91:473927..486544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig91.29.2mRNA_A-nodosum_M_contig91.29.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig91 472948..486612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig91.29.2 ID=prot_A-nodosum_M_contig91.29.2|Name=mRNA_A-nodosum_M_contig91.29.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=530bp
MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELG
SRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVN
VILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSF
CCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDSVTVLIDLLNEQLGKSTD
PTVPRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFED
DFHYRGRAVEKAVAERSGGKGGGGGSGGRSTSSNKAVQLLYTKNWRGEEV
VVEIEQSDDEDGDEDWDEEAAVLFPSRAAIRRKAAEQAAKEERAAKRVKK
ALPTFLSGSNISGEPGGGSGGGGSAVGAGGEWDEDDGDSSDETAPNGKSG
DDTAAAHARRLGVANVTSLEERDEMKKKLLPWTEHMKQVWRRQQAELEDA
SGSGEDGGSDPWWKHEDGDAAPNSGGGRRRSLGGRLGPGVMFRVGGRYVT
MDAVTNEDAAKMSPDEYTRFYNLAVSQRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002853TFIIE_asu
IPR024550TFIIEa/SarR/Rpc3_HTH_dom
IPR036388WH-like_DNA-bd_sf
IPR039997TFE