prot_A-nodosum_M_contig91.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig91.20.1
Unique Nameprot_A-nodosum_M_contig91.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length531
Homology
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BLAST of mRNA_A-nodosum_M_contig91.20.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 9.530e-89
Identity = 204/509 (40.08%), Postives = 268/509 (52.65%), Query Frame = 0 
Query:    2 TFDLQQSFTVTKITIYFHQSNDTERKANPFVISISVNDVTYADSFDGVNTPGTPLLTGEEFAFPDDPVARYVRLTAILDEDQWLSINEVEMYVDLATPAPYTGKNTPAPSVALVSTVLTPTPLSNTASASTSVP-----------TASPSGIGPWQTMMPAISMAPTS------GPTPLGTPMGGLGCSNVTVSNTNGMDGLYVLGPNNT----FLSTATSSATIASSQLATDCADGVSTNCAITKWTISS-DVDTGM-TYMAYDNAEHPSDVTEVWLRVNCSSNTKCVNSPAGVEVVCGDGSSIS---TPAPVALSSTDCGIVEVAGILGEGLDGTYYDDGSSPSGGVTRYMGYDA--GDLTSNGNTLAANWTNGGCPSPSETGTSTDGD-CSWREWRIMPGDDNLDAHEYFTFDEADHPVDIARGIQWYMLDVVEKPYDGAINITCAPADTPALPTSAPTTIXXXXXXXXXXXXMPVALVTDD-SSTRQPVNGSVPPTEGALAVEAG 480
            TFDL  S ++TK+TIYF++ +D +R  NPF++S S +  TY  SF+ VNT  T +  GE+FAFP     RYVR T  L +DQWLSINE E+YVD+ATPAP   +             +  T                        T+    IG       A S+APT              P+GG  C NVTVSN   ++G Y    N      ++ST   +ATI+SS     CAD  +++C + +W I+  D D+ + TY  YD A HPS + EVWLR++      C +SPA + ++CGDG++ S   TPAP +++++DCG++EVAG  G   DG YYDDGS     VT+Y GYD   G+L SNG  + AN  N  C +   T +ST  D CSWR+W I        +  YFT+DEADHPVDIA G  WY  D    PYDGA+ +TCAPA TP L    P T              PV    DD ++TR PV G+  P   A  V  G
Sbjct:   89 TFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTTYTTSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYVDVATPAPVVPEXXXXXXXXXXXPTVEVTXXXXXXXXXXXXXXXXXXXXXXXXTSGSRAIG-ITXXXXAASIAPTGVXXXXXXXXXXXXPIGGPACGNVTVSNAGDLNGDYASSLNGDGSVMYVSTGVIAATISSSAAPAQCADSTASDCNVNRWQIAPLDADSTLPTYWVYDEALHPSTINEVWLRLDNCGTGGCQSSPAELTILCGDGTTASGSGTPAPASVTASDCGVIEVAGTSGAESDGFYYDDGSELGDDVTQYGGYDVVNGELMSNGRAVVANRVNSTCAT---TSSSTGADACSWRQWWIEASSSGTVS--YFTYDEADHPVDIAAGALWYTSDGSIMPYDGAVAVTCAPATTPTL---TPAT-------------SPVPTTDDDGTATRMPVEGTHSPGTAAPVVPGG 575
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BLAST of mRNA_A-nodosum_M_contig91.20.1 vs. uniprot
Match: D7FRB9_ECTSI (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB9_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.990e-27
Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 0 
Query:    2 TFDLQQSFTVTKITIYFHQSNDTERKANPFVISISVNDVTYADSFDGVNTPGTPLLTGEEFAFPDDPVARYVRLTAILDEDQWLSINEVEMYVDLATPAP 101
            TFDL  S ++ K+TIYF++SN+ +R  NPFV+S S +  T+  SF+ +NT  TPL  GE+FAFP     RYVR T  L +DQWLS+NEVE+YVD+ATPAP
Sbjct:   30 TFDLGSSQSLIKLTIYFYKSNEEDRVTNPFVVSTSTDGTTFTTSFEDINTIPTPLGEGEDFAFPTGSSGRYVRFTGDLADDQWLSVNEVEIYVDVATPAP 129
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig91.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTK7_9PHAE9.530e-8940.08F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
D7FRB9_ECTSI1.990e-2756.00F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 1..96
e-value: 1.9E-11
score: 46.0
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 1..95
score: 11.478424
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 2..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig91contigA-nodosum_M_contig91:348801..357846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig91.20.1mRNA_A-nodosum_M_contig91.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig91 348334..357942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig91.20.1 ID=prot_A-nodosum_M_contig91.20.1|Name=mRNA_A-nodosum_M_contig91.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=531bp
MTFDLQQSFTVTKITIYFHQSNDTERKANPFVISISVNDVTYADSFDGVN
TPGTPLLTGEEFAFPDDPVARYVRLTAILDEDQWLSINEVEMYVDLATPA
PYTGKNTPAPSVALVSTVLTPTPLSNTASASTSVPTASPSGIGPWQTMMP
AISMAPTSGPTPLGTPMGGLGCSNVTVSNTNGMDGLYVLGPNNTFLSTAT
SSATIASSQLATDCADGVSTNCAITKWTISSDVDTGMTYMAYDNAEHPSD
VTEVWLRVNCSSNTKCVNSPAGVEVVCGDGSSISTPAPVALSSTDCGIVE
VAGILGEGLDGTYYDDGSSPSGGVTRYMGYDAGDLTSNGNTLAANWTNGG
CPSPSETGTSTDGDCSWREWRIMPGDDNLDAHEYFTFDEADHPVDIARGI
QWYMLDVVEKPYDGAINITCAPADTPALPTSAPTTIAPTAASPAPTATMP
VALVTDDSSTRQPVNGSVPPTEGALAVEAGGSESTGADNTPAIIGGAAGA
AALLALVGIVTYRRMSPPPPPSYDDIVGRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000421FA58C
IPR008979Galactose-bd-like_sf