prot_A-nodosum_M_contig91.13.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig91.13.1
Unique Nameprot_A-nodosum_M_contig91.13.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length632
Homology
BLAST of mRNA_A-nodosum_M_contig91.13.1 vs. uniprot
Match: A0A6H5K704_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K704_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 1.300e-49
Identity = 181/545 (33.21%), Postives = 243/545 (44.59%), Query Frame = 0
Query:   98 ILVATGV--ASKENCTNVRVSGGNDSGDFELGDDNSTYAKAGT---THVIRAIPYGGGARARRRLAEIDGARSVGRWEGGGQRGLANDCETQMWVLTDKATVVD-GYPYYAAFDCADHPVDVNSTWLYIECDDCAKVAPISIACALEAETDLEGVADGDDGXXXXXDGVVDFFTLPVIIGIAAAGLVVLLCLGFFVMRRKKKAPTGSQTFADESEHGASLK---GPRVMGTSAPADASFSHVESSHEGPSVG--------GETATSP---------AGLYPSAPQHQKNLSKGPNMADTSYGGIYASGVSGGQAS-RHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARAKALGIELVHQEKQQHVGVLRTGGYERRPLGDGSG--------------------------------------------------------VKWSAGQNLEPRGVYDDGVASQFSD-SAAGSVFSIHPPPDDLLQEHTYD---CDSSVAASSPGAYSMYSHFTAGGGTYVGGM--SEFAASDVDDLAPLEQP 553
            +L++T +  A++E CT+V V+GG+  G +ELG+ +S+    GT   THV++ + +   +RARR L    G           +RGLANDC TQMW+L D   V + G+PYY+ FDCA HP  V STWLY++CDDCA+VA IS+ C        +   DGD              T+P II IA  GL+V+LC+GF V   KK+A  GS TFAD+S+H  + +   G    G +A AD             +V         GET  SP         +G         +N+  G  ++  S  G+ A G +       H                   XXXXXXXX     AA      +E+ +  K     VLR                                                                      + WSAGQN+  R  +D   +S+  D SAAGSV+ + PP +DL  EH+Y     D SVAASSPGAYSMYSH+TAGGGTY GG+  +  A SD D  +    P
Sbjct:   18 VLLSTAIYAAAQETCTSVTVTGGDLPGVYELGE-SSSEVYVGTDDSTHVLQPVVFAE-SRARRNLVGGTGDGXXXXXXXXXRRGLANDCATQMWILADTGAVEEEGFPYYSTFDCATHPASVESTWLYVDCDDCAEVATISVVCTSPEVLTSDDGGDGD-------------LTIPAIIAIAVGGLIVVLCVGFCVFHCKKRAHKGSHTFADDSQHSLAQQKRAGKAGAGGAAVADXXXXXXXXXXXXXAVPLPAYTGAIGETVESPMAAGGTMGDSGDRGVGGDGPRNVRGGIGVSGGSSAGLLAKGSNAKSFKPNHGGVNTPAYEGIFAPRGGAGXXXXXXXXTATTSAALPHPAAVEMSNYAKP----VLRKDSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVWSAGQNMGHRRSFDQ--SSEIGDDSAAGSVYELQPPAEDL--EHSYHQDGYDDSVAASSPGAYSMYSHYTAGGGTYTGGVGANSEAWSDEDGASSYRPP 539          
BLAST of mRNA_A-nodosum_M_contig91.13.1 vs. uniprot
Match: D8LHN9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN9_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 3.840e-37
Identity = 87/213 (40.85%), Postives = 119/213 (55.87%), Query Frame = 0
Query:   98 ILVATGV--ASKENCTNVRVSGGNDSGDFELGDDNSTYAKAGTTHVIRAIPYGGGARARRRLAEIDGARSVGRWEGGGQRGLANDCETQMWVLTDKATVVD-GYPYYAAFDCADHPVDVNSTWLYIECDDCAKVAPISIACALEAETDLEGVADGDDGXXXXXDGVVDFFTLPVIIGIAAAGLVVLLCLGFFVMRRKKKAPTGSQTFADESEH 307
            +L++T +   ++E CT+V V+GG+  GD+ELG+ +       +T V++ + +   +RARR L                 RGLANDC +QMW+L D   V + G+PYY+ FDCA HP  V STWLY++CDDCA                   +  GD G            TLPVII I A GL++LLCLGF V+ RKK+A  GS TFAD+S+H
Sbjct:   24 VLLSTAIYAVAQETCTSVTVTGGDFPGDYELGEGDVYVGTDDSTRVLQPVVFAE-SRARRSLVGXXXXXXXXXXXXXXXRGLANDCASQMWILADTGAVEEAGFPYYSTFDCATHPASVESTWLYVDCDDCAXXXXXXXXXXXXXXXXXXLLTSGDGGDSG--------LTLPVIIAIVAGGLILLLCLGFCVVHRKKRAHKGSHTFADDSQH 227          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig91.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K704_9PHAE1.300e-4933.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHN9_ECTSI3.840e-3740.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 552..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 610..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig91contigA-nodosum_M_contig91:211537..240730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig91.13.1mRNA_A-nodosum_M_contig91.13.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig91 211537..240730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig91.13.1 ID=prot_A-nodosum_M_contig91.13.1|Name=mRNA_A-nodosum_M_contig91.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=632bp
LWSHHGDNSLLRPTGIQIATKNYATQQVMTRTNDKEVNQASLLHIESNLD
RLGLLSPTHDQRSQHQSGQITLQPVPSMAGASRHGAMLVISATIIFQILV
ATGVASKENCTNVRVSGGNDSGDFELGDDNSTYAKAGTTHVIRAIPYGGG
ARARRRLAEIDGARSVGRWEGGGQRGLANDCETQMWVLTDKATVVDGYPY
YAAFDCADHPVDVNSTWLYIECDDCAKVAPISIACALEAETDLEGVADGD
DGDGDGDDGVVDFFTLPVIIGIAAAGLVVLLCLGFFVMRRKKKAPTGSQT
FADESEHGASLKGPRVMGTSAPADASFSHVESSHEGPSVGGETATSPAGL
YPSAPQHQKNLSKGPNMADTSYGGIYASGVSGGQASRHESRSASSRQPSR
AESLVDSRKDSMAEAAAAAHAARAKALGIELVHQEKQQHVGVLRTGGYER
RPLGDGSGVKWSAGQNLEPRGVYDDGVASQFSDSAAGSVFSIHPPPDDLL
QEHTYDCDSSVAASSPGAYSMYSHFTAGGGTYVGGMSEFAASDVDDLAPL
EQPRVMLVRRQDPRGQPPAYNESPPVALDSPDSRPPRGKHVIEASLSMSP
AGLAARADQNSARRSRKAGKRADRAAENATR*
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