prot_A-nodosum_M_contig9055.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9055.2.1
Unique Nameprot_A-nodosum_M_contig9055.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length57
Homology
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BLAST of mRNA_A-nodosum_M_contig9055.2.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 5.110e-24
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0 
Query:    1 GLPQGNFRAQLDDFNEGKLLRISADALVADAPDSADTTGFLVRDEDFWLEAKGFRNP 57
            GLPQGNFRAQ DDFNEGKLLRIS+DALVA+A   A TTGFLVRD DFWLEAKGFRNP
Sbjct:  236 GLPQGNFRAQFDDFNEGKLLRISSDALVAEATADASTTGFLVRDTDFWLEAKGFRNP 292
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9055.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE5.110e-2485.96PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9055contigA-nodosum_M_contig9055:14489..15114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9055.2.1mRNA_A-nodosum_M_contig9055.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9055 14487..15114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9055.2.1 ID=prot_A-nodosum_M_contig9055.2.1|Name=mRNA_A-nodosum_M_contig9055.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=57bp
GLPQGNFRAQLDDFNEGKLLRISADALVADAPDSADTTGFLVRDEDFWLE
AKGFRNP
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