prot_A-nodosum_M_contig9054.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9054.1.1
Unique Nameprot_A-nodosum_M_contig9054.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length119
Homology
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 1.150e-49
Identity = 71/118 (60.17%), Postives = 89/118 (75.42%), Query Frame = 0
Query:   11 NSEMCGACIKGKGD---------RGEFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCDDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQGDEPYD 119
            +S MCGACI+G+G           G FKAYV DRCPEC  GDLDFA  G GRW+I+W FVPC+ G D TF+FEGSN  YWKIQPRG +SPVE+LW+NG++A R++DNFF+++G  P+D
Sbjct:   83 DSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGG-PFD 199          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 2.910e-33
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    3 AVSAQYGNNSEMCGACIKGKGDRG---------EFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCDDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQGD 115
            A++A+   +S MCGAC++G               FKA++ D+CPEC  GDLDF+M G GRW+I W+FV C  G++ +F+   +N +YWK+QPRG+ +PV  L V+G+ A RT DN F +  D
Sbjct:  140 ALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACP-GEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHND 260          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 4.300e-33
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 0
Query:    7 QYGNNSEMCGACIKGKGDRG--------EFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCDDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQ 113
            QYG+ S MCGAC++G+G  G         FK ++MD+CPEC+ GDLDF  G  GRW+I W+FV C  G++ +F  E    +YWKIQPRG+ +PVE L + G  A RT DN F ++
Sbjct:  352 QYGD-SLMCGACVEGEGTGGGSGSDPVGTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELE 465          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 122 bits (305), Expect = 2.330e-32
Identity = 60/120 (50.00%), Postives = 70/120 (58.33%), Query Frame = 0
Query:    3 AVSAQYGNNSEMCGACIK--GKGD-------RGEFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCDD-GDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVI 112
            AVS      S  CGAC++  G GD        G F AYVMDRCPECA GDLD A  G GRW ++W  VPC   G  P F+ EGSN HY K+Q RG  +P   + V G    RTQDNFF++
Sbjct:   79 AVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIV 198          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.130e-30
Identity = 56/117 (47.86%), Postives = 75/117 (64.10%), Query Frame = 0
Query:    5 SAQYGNNSEMCGACIKGKGDRG--------EFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCDDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQ 113
            +AQYG+ S MCG+C++G+G  G         FK ++MD+CPEC  GDLDF  G  GRW+I WRFV C  G++ +F       +YWKIQPRG+ +PVE L + G  A RT DN F ++
Sbjct:  387 AAQYGD-SLMCGSCVEGEGTGGGGGDNPIGTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACP-GEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELE 501          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: A0A1S3HSP2_LINUN (uncharacterized protein LOC106157840 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HSP2_LINUN)

HSP 1 Score: 80.5 bits (197), Expect = 5.330e-16
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = 0
Query:    3 AVSAQYGNNSEMCGACIKGKGD---------RGEFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCDDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWV-NGEKAT-----RTQDNFFVI 112
            A++ +    S  CG C++  G           G +  YV D CP C  GD+DFA+ G GRWNI++  VPC   D+ ++ F+ S+  Y KIQ   ++ PV  + + NG         RT D F+++
Sbjct:   72 AINIEQFTGSLTCGICLRVTGSGQGLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDNVSYRFQDSSPWYIKIQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFWIM 196          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: A0A1V2QUL7_9PSEU (Lipoprotein A-like protein n=2 Tax=Saccharothrix TaxID=2071 RepID=A0A1V2QUL7_9PSEU)

HSP 1 Score: 73.9 bits (180), Expect = 1.130e-13
Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 0
Query:   10 NNSEMCGACIKGKGDRGEFKAYVMDRCPECAHGDLDFAMGG--------TGRWNINWRFVPCDDGDDPTFIFEGSNAHYW-KIQPRGSKSPVEKLWVNGEKA----TRTQDNFFVIQ 113
            +NS MCGA ++  G  GE    ++DRCPECA GD+DF+            GR  I+WR V  D      + ++  ++ +W  IQ R  ++PV KL V          R Q N+F+ +
Sbjct:   66 DNSAMCGAYLRATGPLGEVTVKIVDRCPECAPGDVDFSQAAFARIANPTAGRVPISWRLVSPDISGPVRYRYKEGSSQWWCGIQVRNHRNPVAKLEVRAGSGWVSLPRYQYNYFISE 182          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: A0A2D4C6K8_PYTIN (Carbohydratebinding protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K8_PYTIN)

HSP 1 Score: 72.0 bits (175), Expect = 1.280e-13
Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 0
Query:   15 CGACIKGK-GDRGEFKAYVMDRCPECAHGDLDFAMG--------GTGRWNINWRFVPCDD----GDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVN-GEKATRTQDNFFVIQG 114
            CG C+  K GD       ++D+CPEC HGDLDFA          G GR  I+W FV C D    GD    + EGSN ++   QP+  K  ++ + ++ G    R + N  V+ G
Sbjct:   18 CGRCVSVKHGDNAPVTIQIVDQCPECKHGDLDFAPDAYNAVIKKGPGREKISWSFVECPDLFATGDFEFVLKEGSNPYWTAFQPQNFKHGIDCVDIDVGNGWERLERNEGVVVG 131          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: A0A101UQ08_9ACTN (DPBB_1 domain-containing protein n=2 Tax=Streptomyces dysideae TaxID=909626 RepID=A0A101UQ08_9ACTN)

HSP 1 Score: 73.6 bits (179), Expect = 1.950e-13
Identity = 41/117 (35.04%), Postives = 59/117 (50.43%), Query Frame = 0
Query:   10 NNSEMCGACIKGKGDRGEFKAYVMDRCPECAHGDLDFAMGG--------TGRWNINWRFVPCDDGDDPTFIFEGSNAHYW-KIQPRGSKSPVEKLWVNG----EKATRTQDNFFVIQ 113
            +NS MCGA +K KG RGE    ++DRCPECA GD+D              GR  I W+ V  D G    + ++  ++ +W  IQ R  ++PV  L V       +  R + N+FV +
Sbjct:   80 DNSRMCGAYLKVKGPRGEITVKIVDRCPECAPGDIDLGERAFARIADPVAGRVPITWQLVSPDIGGPVAYRYKEGSSQWWCGIQVRNHRNPVATLEVRTGSTWRQLPRYEYNYFVSE 196          
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Match: UPI001C58296F (T9SS type A sorting domain-containing protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C58296F)

HSP 1 Score: 73.9 bits (180), Expect = 3.120e-13
Identity = 45/119 (37.82%), Postives = 60/119 (50.42%), Query Frame = 0
Query:   10 NNSEMCGACIKGKGDRGEFKAYVMDRCPECAHGDLD-----FAMGGT---GRWNINWRFVPCDDGDDPTFIF----EGSNAHYWKIQPRGSKSPVEKLWVNGEKAT-----RTQDNFFV 111
            + S  CGACI+  G +G  +  V+DRCPECA GD+D     FAM      GR  I+W+FVPCD   +   I     EGS+ ++  IQ R  K  + K+       T     R   NFF+
Sbjct:   67 DGSNACGACIEVTGPKGSVRLKVVDRCPECAEGDVDMTEQAFAMMADVIDGRVPISWKFVPCDSASNNESIKINFKEGSSIYWTAIQFRNIKHAIAKMEYQLSDNTWKPVDRVLFNFFI 185          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9054.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHU1_ECTSI1.150e-4960.17Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LRN1_ECTSI2.910e-3344.26Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D8LGP4_ECTSI4.300e-3348.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1X6NJE1_PORUM2.330e-3250.00Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A6H5KBW3_9PHAE2.130e-3047.86Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A1S3HSP2_LINUN5.330e-1633.60uncharacterized protein LOC106157840 n=1 Tax=Lingu... [more]
A0A1V2QUL7_9PSEU1.130e-1334.19Lipoprotein A-like protein n=2 Tax=Saccharothrix T... [more]
A0A2D4C6K8_PYTIN1.280e-1335.96Carbohydratebinding protein putative n=1 Tax=Pythi... [more]
A0A101UQ08_9ACTN1.950e-1335.04DPBB_1 domain-containing protein n=2 Tax=Streptomy... [more]
UPI001C58296F3.120e-1337.82T9SS type A sorting domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 1..62
e-value: 3.6E-12
score: 48.4
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 3..82
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 70..119
e-value: 1.6E-5
score: 26.9
NoneNo IPR availablePANTHERPTHR31836FAMILY NOT NAMEDcoord: 6..108
NoneNo IPR availablePANTHERPTHR31836:SF21EXPANSIN-LIKE PROTEIN 2coord: 6..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9054contigA-nodosum_M_contig9054:8582..8938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9054.1.1mRNA_A-nodosum_M_contig9054.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9054 8582..8938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9054.1.1 ID=prot_A-nodosum_M_contig9054.1.1|Name=mRNA_A-nodosum_M_contig9054.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=119bp
IFAVSAQYGNNSEMCGACIKGKGDRGEFKAYVMDRCPECAHGDLDFAMGG
TGRWNINWRFVPCDDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGE
KATRTQDNFFVIQGDEPYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf