prot_A-nodosum_M_contig905.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig905.1.1
Unique Nameprot_A-nodosum_M_contig905.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length117
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.870e-67
Identity = 111/116 (95.69%), Postives = 113/116 (97.41%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKASGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKS KAPKKA  KK++NKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.340e-61
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKAS-GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+ KAPKKA+ GKKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.180e-60
Identity = 100/116 (86.21%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKASGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKS KAPKKA  K K  KRTESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 192 bits (489), Expect = 9.080e-60
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKAS-GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+ KAPKKA+ GKKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 187 bits (474), Expect = 2.430e-59
Identity = 99/116 (85.34%), Postives = 108/116 (93.10%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKASGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+S KAPKKA+   KS KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 185 bits (469), Expect = 1.320e-58
Identity = 97/116 (83.62%), Postives = 108/116 (93.10%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKASGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+ KAPKKA  K+  NKR E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.550e-58
Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKAS--GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKS KAPKK    GK +  KR ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 183 bits (465), Expect = 6.720e-58
Identity = 99/116 (85.34%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:    1 MAKTPSKKSVKAPKKASGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+  APKKA GK+ S KRTESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    8 MAKTPSKKAA-APKKAGGKR-SRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: A0A7R9ZTA9_9STRA (Histone H2B n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZTA9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.460e-57
Identity = 99/115 (86.09%), Postives = 107/115 (93.04%), Query Frame = 0 
Query:    3 KTPSKKSVKAPKKAS-GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            KTPSK+S KAPKKAS G  KS KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:   64 KTPSKQSAKAPKKASTGSSKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 178
[Close]
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Match: A0A482SFE7_9ARCH (Histone domain-containing protein n=2 Tax=archaeon TaxID=1906665 RepID=A0A482SFE7_9ARCH)

HSP 1 Score: 177 bits (449), Expect = 1.730e-55
Identity = 95/119 (79.83%), Postives = 109/119 (91.60%), Query Frame = 0 
Query:    1 MAKTPS----KKSVKAPKKASGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 115
            MAKTP+    KK+VK PKKA+G KK  KRTESYS+YIY+VLKQVHP+TGISKRGMSI+NSFIND+FER+A ES +L+RYNKK+TLSSRE+QTAVRL+LPGELAKHAVSEGTKAVTKFTS
Sbjct:    1 MAKTPAPSVGKKAVKTPKKATGGKKHAKRTESYSTYIYRVLKQVHPNTGISKRGMSILNSFINDIFERIALESSRLSRYNKKSTLSSREIQTAVRLLLPGELAKHAVSEGTKAVTKFTS 119
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig905.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI8_ECTSI2.870e-6795.69Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A836CJ22_9STRA1.340e-6188.89Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A6U0X3U9_9STRA1.180e-6086.21Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R... [more]
A0A836CJT3_9STRA9.080e-6088.89Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
B7FWR8_PHATC2.430e-5985.34Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
H2B_OLILU1.320e-5883.62Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830... [more]
A0A485K2U0_9STRA1.550e-5883.90Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep... [more]
A0A6U6DWX5_9STRA6.720e-5885.34Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ... [more]
A0A7R9ZTA9_9STRA1.460e-5786.09Histone H2B n=1 Tax=Craspedostauros australis TaxI... [more]
A0A482SFE7_9ARCH1.730e-5579.83Histone domain-containing protein n=2 Tax=archaeon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 29..47
score: 84.56
coord: 100..113
score: 92.65
coord: 87..100
score: 90.61
coord: 70..87
score: 56.83
coord: 48..68
score: 67.66
IPR000558Histone H2BSMARTSM00427h2b3coord: 19..115
e-value: 1.3E-69
score: 247.3
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 3..116
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 84..106
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 3..92
e-value: 5.7E-18
score: 65.5
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..116
e-value: 6.7E-56
score: 189.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR23428:SF256HISTONE H2B.6coord: 3..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig905contigA-nodosum_M_contig905:31711..32061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig905.1.1mRNA_A-nodosum_M_contig905.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig905 31647..32061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig905.1.1 ID=prot_A-nodosum_M_contig905.1.1|Name=mRNA_A-nodosum_M_contig905.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp
MAKTPSKKSVKAPKKASGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold