prot_A-nodosum_M_contig904.19.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig904.19.2
Unique Nameprot_A-nodosum_M_contig904.19.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length535
Homology
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: D8LEH1_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH1_ECTSI)

HSP 1 Score: 532 bits (1370), Expect = 1.320e-182
Identity = 324/585 (55.38%), Postives = 368/585 (62.91%), Query Frame = 0
Query:    1 MATWKGSGGTRPVSRVGPPNKLWHAFKHKNFDIFKFDLDAEEDQNYVQASERFLEFQAQVGMVLHHSETFRRSLEESLQQGVELADDFGRISAGQGGGRVPEAWAHKAGGQAFFLKGMLEESVASLRQYLYNDLEEKLVRPLRDEFANFTGVQGKMVERSNMKMEMLHYSNKVHELKANQKATDEKKDRNKEKYAQASQALRDQTNQLMSTFAHAEQVRQRLLTQDLPTLVLTERNAFDAFAINLNKAAAEAIDGEPRPPRMSDAARAPHRLMPASDFPTTPTETALVLAEVSLEDGTSQELPPAYSSPYTVKVEPPPPAEDAKPTIIKKRSPLPVSPKETGAPWSSSNGGGEFGAELKRAQEHQNSKMAAESA------------------------AATTSAANTAETVASVPPGVE--DGADEVATPTAVSLGPTAATYPS-------AAEDADPSMALEHSPPASTEMPFGE-DASPPPFEESIGVEESEPVGEDEGAEMP-----------------ELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTEPW 534
            MATWKG  G +P  RV  PNKLWHAFKHKN D+FKFDLDA+EDQNYV ASERFLEFQ Q+GMVLHH++ FR++LEESLQ  VELADDFGR++AG GGGR  E WA KAGGQAFFLKGMLEES  SLRQ+L ++LEEK+VR LR+E ANF+ V  +M+ERSNMKMEMLHYSNKV ELK +QKATDEKKDRNKEKYAQASQALRDQTNQLMS FAHAEQ+RQRLLTQD P+++  E+NAFDAFAINLNKAAAE  DGEPRPPRMSDAARAP R                                                               P+SPK+ GAPWS SN GGEFG ELKRA EHQNSKMAAESA                        A T +  N++ + A      E  D ++  A       G   AT P+       AA   D   A+  S P  T+ P  E +A            E+   GE++  E+P                  L  GKVRVRALYDYEATQEGDLSF  GDMI+TDGG+FSGDGWVSG C+G+TGIFPANYTEPW
Sbjct:    1 MATWKG--GPKPPPRVVAPNKLWHAFKHKNLDVFKFDLDADEDQNYVSASERFLEFQTQLGMVLHHTQLFRKTLEESLQHAVELADDFGRVAAGNGGGRTMEPWAQKAGGQAFFLKGMLEESAVSLRQHLCDELEEKVVRSLREEVANFSTVHTQMLERSNMKMEMLHYSNKVQELKGSQKATDEKKDRNKEKYAQASQALRDQTNQLMSIFAHAEQLRQRLLTQDFPSVITAEKNAFDAFAINLNKAAAETSDGEPRPPRMSDAARAPQR--------------------------------------------------------------TPMSPKDGGAPWSGSNDGGEFGEELKRAHEHQNSKMAAESAXXXXXXXXXXXXXXXXXXXXXXXXADTPAMTNSSTSGADAADDAEKHDPSEAAALAAPAPAGEKDATAPTESPKPPAAAATVDDEAAVAGSGPK-TDSPDDEAEALTAAVPAMATAPEASAPGEEQAEEVPGXXXXXXXXXXXXXXXXXLEPGKVRVRALYDYEATQEGDLSFGVGDMIITDGGAFSGDGWVSGTCHGNTGIFPANYTEPW 520          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: A0A836CJ66_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ66_9STRA)

HSP 1 Score: 161 bits (408), Expect = 8.330e-39
Identity = 154/505 (30.50%), Postives = 240/505 (47.52%), Query Frame = 0
Query:   38 LDAEEDQNYVQASERFLEFQAQVGMVLHHSETFRRSLEESLQQGVELADDFGRISAGQGGGRVPEAWAHKAGGQAFFLKGMLEESVASLRQYLYNDLEEKLVRPLRDEFANFTGVQGKMVERSNMKMEMLHYSNKVHELKANQKATDEKKDRNKEKYAQASQALRDQTNQLMSTFAHAEQVRQRLLTQDLPTLVLTERNAFDAFAINLNKAAAEAIDGEPRPPRMSDAARAPHRLMPAS---DFPTTPTETALVLAEVSLED--GTSQELPPAYS----SPYTVKVEPPPPAE-DAKPTIIKKRSPLPVSPKETGAPWSSSNGGGEFGAELKRAQEHQNSKMAAESAAATTSAANTAETVASVPPGVEDGADEVATPTAVSLGPTAATYPSAAEDADPSMALEHSPPASTEMPFGEDASPPPFEESIGVEESEPVGEDEGAEMPELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            +D E D++Y  A ERFL F+AQ+  ++ ++E FR  L+ES+    +L+ +F ++S G+G                        +S  +L + L+ DL++ ++  L+ +  ++  +   + ER  +K+E+ HYS+KV EL  N K   E+K RN+EKYA A+  LR+QT+ L+  FA +E  R+R+L +DLP ++  +R A+ A A N  KAA   +    R      ++    + +P S    +  T T      A +S     GTS +     +    S + +  +P   A  D+ P+ + KR+   +   + G      N GG  G         Q+S   + +AAA+                     D V+T TA+     A   P + E          +     + P    A+P           +EP   D G     L  G +RVRALYD+EA +EGDL+F A D+IVTD   +S DGWV+G CNG TG FP+NYTE
Sbjct:  333 VDTESDRDYKAAEERFLVFRAQLLEIIQNTEQFRSRLKESIAVASKLSQNFLKVSQGEG------------------------DSGVALDELLFVDLDKYVLSDLKIQHESYNDINKLVKERYELKVELQHYSDKVQELNDNPKVAAERKVRNEEKYATANTRLREQTDALLRRFAESEVRRRRVLEEDLPRIMDLKRLAYAALATNAEKAAQGLVLAPMRSGSRGSSSAFGSKDLPGSARGSYDNTVTGQGAESARMSDVPLGGTSSQRTSVNTDHGASSHALTAKPAAAALLDSPPSHLYKRASGSMESVQPGG-----NAGGVVG---------QSSHSGSAAAAASE--------------------DVVSTRTALEQNMGATAVPVSQE------VFHEASYEQEQEPVTAAATPEANAADANASRTEPEVVDGG-----LGPGYMRVRALYDFEAAEEGDLNFKANDIIVTDASRWSADGWVTGTCNGQTGQFPSNYTE 768          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: A0A835Z502_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z502_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.810e-15
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0
Query:  468 AEMPELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            ++  EL  G +RVRAL+D+EA Q GDL+F AGD+I+T+   +  DGWV+G CNG TG FP+NYTE
Sbjct:   76 SDSEELPPGFIRVRALFDFEAAQPGDLNFKAGDIIITESAQWGMDGWVNGICNGQTGQFPSNYTE 140          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: A0A7S3XPH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPH4_HETAK)

HSP 1 Score: 68.6 bits (166), Expect = 4.400e-10
Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  471 PELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSG-ECNGSTGIFPANYTEPW 534
            P +  GK+R++A+++Y A Q+GDLSF  GD I  +   +  + W+ G + +GS+G+FP NYTEPW
Sbjct:   84 PVIPPGKIRLKAVFEYVAQQDGDLSFDVGDAIFVEDQVYEENAWIEGSKPDGSSGVFPTNYTEPW 148          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: A0A8H6TP15_9AGAR (DUF500-domain-containing protein n=1 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6TP15_9AGAR)

HSP 1 Score: 64.3 bits (155), Expect = 2.880e-7
Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 0
Query:  466 EGAEMPELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            E +  P  + G  R  ALYD+EA Q GDLSFC GD+I+    S S D W +G  +G  GIFPAN+ +
Sbjct:  407 EPSRSPAPSEGVPRAVALYDFEAVQPGDLSFCKGDIIIVTKRSASTDDWWTGIIDGRKGIFPANFVQ 473          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: F2U5Y3_SALR5 (Endophilin n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U5Y3_SALR5)

HSP 1 Score: 62.4 bits (150), Expect = 6.650e-7
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  476 GKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            G +R RALYDY+A +EG+L+F  GD I+TD      +GW  G CNG  G+FPANY E
Sbjct:  271 GGLRARALYDYQADEEGELTFDPGD-IITDIEQID-EGWWQGACNGQFGLFPANYVE 325          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: UPI000644A38D (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A38D)

HSP 1 Score: 62.4 bits (150), Expect = 8.740e-7
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
Query:  474 AAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            A+G  + +ALYDYEA QEGDLSF AGD+I     S   +GW  GEC G TG FP+ + +
Sbjct:  319 ASGYPQAKALYDYEAAQEGDLSFYAGDIISIHDQS-DANGWWVGECQGFTGTFPSTFVQ 376          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: UPI0018D9B85D (endophilin-A1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9B85D)

HSP 1 Score: 59.7 bits (143), Expect = 1.910e-6
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 0
Query:  465 DEGAEMPELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            D  A +P + A K R +ALYD+EA  EG+L F  GD+I     S   + W+ GE NG TG FPANY E
Sbjct:  159 DYNAPVP-VTATKERCKALYDFEAENEGELGFQEGDIISIV--SKIDENWIDGELNGHTGYFPANYVE 223          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: UPI0018D899CD (endophilin-A1-like n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D899CD)

HSP 1 Score: 59.7 bits (143), Expect = 3.450e-6
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 0
Query:  465 DEGAEMPELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            D  A +P + A K R +ALYD+EA  EG+L F  GD+I     S   + W+ GE NG TG FPANY E
Sbjct:  211 DYNAPVP-VTATKERCKALYDFEAENEGELGFQEGDIISIV--SKIDENWIDGELNGHTGYFPANYVE 275          
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Match: A0A0L0DF28_THETB (Cortactin isoform F n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DF28_THETB)

HSP 1 Score: 57.8 bits (138), Expect = 4.600e-6
Identity = 31/62 (50.00%), Postives = 37/62 (59.68%), Query Frame = 0
Query:  471 PELAAGKVRVRALYDYEATQEGDLSFCAGDMIVTDGGSFSGDGWVSGECNGSTGIFPANYTE 532
            P   A K    A+YDYEAT + +LSF  GD+I         DGW SGE NG+ G+FPANY E
Sbjct:  124 PGPPATKETCTAVYDYEATDDTELSFNEGDVITVL--EKIDDGWWSGELNGNVGVFPANYVE 183          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig904.19.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEH1_ECTSI1.320e-18255.38SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CJ66_9STRA8.330e-3930.50SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z502_9STRA2.810e-1556.92SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3XPH4_HETAK4.400e-1044.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8H6TP15_9AGAR2.880e-747.76DUF500-domain-containing protein n=1 Tax=Mycena ke... [more]
F2U5Y3_SALR56.650e-754.39Endophilin n=1 Tax=Salpingoeca rosetta (strain ATC... [more]
UPI000644A38D8.740e-752.54hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI0018D9B85D1.910e-648.53endophilin-A1-like n=1 Tax=Patiria miniata TaxID=4... [more]
UPI0018D899CD3.450e-648.53endophilin-A1-like n=3 Tax=Patiria miniata TaxID=4... [more]
A0A0L0DF28_THETB4.600e-650.00Cortactin isoform F n=1 Tax=Thecamonas trahens ATC... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableGENE3D2.30.30.40SH3 Domainscoord: 474..534
e-value: 1.3E-17
score: 65.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..386
NoneNo IPR availablePANTHERPTHR47174BRIDGING INTEGRATOR 3coord: 39..206
coord: 181..532
NoneNo IPR availablePANTHERPTHR47174:SF1REDUCED VIABILITY UPON STARVATION PROTEIN 167coord: 39..206
coord: 181..532
NoneNo IPR availableCDDcd00174SH3coord: 479..530
e-value: 4.02324E-15
score: 67.4879
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 522..534
score: 40.83
coord: 478..488
score: 51.5
coord: 492..507
score: 29.33
IPR001452SH3 domainSMARTSM00326SH3_2coord: 478..534
e-value: 1.6E-12
score: 57.6
IPR001452SH3 domainPFAMPF14604SH3_9coord: 482..532
e-value: 1.3E-11
score: 44.2
IPR001452SH3 domainPROSITEPS50002SH3coord: 475..534
score: 23.143871
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 36..254
e-value: 1.2E-15
score: 59.5
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 41..248
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 474..533

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig904contigA-nodosum_M_contig904:114172..122162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig904.19.2mRNA_A-nodosum_M_contig904.19.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig904 114172..123806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig904.19.2 ID=prot_A-nodosum_M_contig904.19.2|Name=mRNA_A-nodosum_M_contig904.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=535bp
MATWKGSGGTRPVSRVGPPNKLWHAFKHKNFDIFKFDLDAEEDQNYVQAS
ERFLEFQAQVGMVLHHSETFRRSLEESLQQGVELADDFGRISAGQGGGRV
PEAWAHKAGGQAFFLKGMLEESVASLRQYLYNDLEEKLVRPLRDEFANFT
GVQGKMVERSNMKMEMLHYSNKVHELKANQKATDEKKDRNKEKYAQASQA
LRDQTNQLMSTFAHAEQVRQRLLTQDLPTLVLTERNAFDAFAINLNKAAA
EAIDGEPRPPRMSDAARAPHRLMPASDFPTTPTETALVLAEVSLEDGTSQ
ELPPAYSSPYTVKVEPPPPAEDAKPTIIKKRSPLPVSPKETGAPWSSSNG
GGEFGAELKRAQEHQNSKMAAESAAATTSAANTAETVASVPPGVEDGADE
VATPTAVSLGPTAATYPSAAEDADPSMALEHSPPASTEMPFGEDASPPPF
EESIGVEESEPVGEDEGAEMPELAAGKVRVRALYDYEATQEGDLSFCAGD
MIVTDGGSFSGDGWVSGECNGSTGIFPANYTEPW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR027267AH/BAR_dom_sf
IPR036028SH3-like_dom_sf