prot_A-nodosum_M_contig903.32.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig903.32.1
Unique Nameprot_A-nodosum_M_contig903.32.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length586
Homology
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A835ZDA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.200e-27
Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = 0
Query:   38 AQRSQIVNMLLKGNIYGLPGSDGTRWSNFREWAKNQHPLLSMCMAHELHPFSRIERLSVMMCYLSWAFFITIVFEGAEYKKQSICEQGCVETCCNDEGKSWCGAGSGTNSDEITVEVYEAACSNPMPWWILSFIIAGCTVPYSTVLKVAATCACVQSMPRCIKDCFECIGGVMLQLFGVLSVVWLVFGI 226
            AQ  ++      G  YG PG+ G   SN+     N HP+LS+ +AH +HP SR+ER+ +++C +SW F +  + E    + Q+ C   C    C D   S C A S     ++     EA C   MP W+ S I AG T PY  ++   ATC+  +   R I  C E +GG+ + L  VLS +W+  G+
Sbjct:   21 AQEKRVRLFFAAGGAYGAPGTTGALVSNYMHMFCNTHPILSLMVAHPMHPLSRLERVMLLVCNMSWVFLVVTLLE----RWQAQCASDCAMGICADNNGSVCAASSCVPGADMRTSGAEA-CDAIMPTWVPSLIAAGLTAPYGMIVGAVATCSWARGFHRRIHICIERVGGLSVLLVAVLSALWVALGV 204          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A7S3YP69_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YP69_9EUKA)

HSP 1 Score: 73.2 bits (178), Expect = 3.410e-10
Identity = 50/198 (25.25%), Postives = 88/198 (44.44%), Query Frame = 0
Query:   46 MLLKGNIYGLPGSDGTRWSNFREWAKNQHPLLSMCMAHELHPFSRIERLSVMMCYLSWAFFITIVFEGAEYKKQSICEQGCVETCCNDEGKSWCGAGSGTNSDEITVEVYEAACSNPMPWWILSFIIAGCTVPYSTVLKVAATCACVQSMPRCIKDCFECIGGVMLQLFGVLSVVWLVFGITLSLELDDDGAFMATYV 243
            ML     YGLPG+DG   S + E    ++PL+++  +H+LHPFSR ER+ V + YL++A F+++ FE   Y++ +                                            + + S IIA  TVPY+ +++  A  +C    P   + C E  G  +L    + S +W +  + +  E D +  F+ +++
Sbjct:    1 MLAAQVAYGLPGTDGKFCSCYSEHVLQENPLIAITDSHDLHPFSRKERVMVFINYLAFALFLSVEFE---YRQDTF-------------------------------------------FIVKSAIIAALTVPYNMLMRGIAEASCCIGCPSIFQKCCEETGRFVLWALVIQSALWTLAALIVLGEEDKENTFLISWI 152          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A0S7F0Y0_9TELE (NED4L (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7F0Y0_9TELE)

HSP 1 Score: 57.4 bits (137), Expect = 2.140e-6
Identity = 22/32 (68.75%), Postives = 24/32 (75.00%), Query Frame = 0
Query:  392 LPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            LPPGWE RV  DGR  YIDHN+KTTQW  P +
Sbjct:   38 LPPGWEERVHTDGRTFYIDHNTKTTQWEDPRL 69          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A6G0V353_9BILA (HECT-type E3 ubiquitin transferase n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V353_9BILA)

HSP 1 Score: 62.0 bits (149), Expect = 3.060e-6
Identity = 32/65 (49.23%), Postives = 38/65 (58.46%), Query Frame = 0
Query:  359 PLSSMVVGTHQSGAGMSNIMPSAQGPHPGGGMSLPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            P S M   T  S A  S+IM            +LPPGWEARV + GR+LY+DH +KTT W PPTI
Sbjct:  787 PKSVMSGSTSDSSAISSSIMXDRXXXXXISSSNLPPGWEARVDSKGRLLYLDHINKTTSWKPPTI 851          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A0S7EGK8_9TELE (NED4L (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7EGK8_9TELE)

HSP 1 Score: 56.6 bits (135), Expect = 3.150e-6
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0
Query:  392 LPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            LPPGWE R+ +DGR+ YIDHN+K TQW  P +
Sbjct:   33 LPPGWEERIHSDGRIFYIDHNTKVTQWEDPRL 64          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A0S7EMT4_9TELE (NED4L (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7EMT4_9TELE)

HSP 1 Score: 56.6 bits (135), Expect = 7.180e-6
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0
Query:  392 LPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            LPPGWE R+ +DGR+ YIDHN+K TQW  P +
Sbjct:   70 LPPGWEERIHSDGRIFYIDHNTKVTQWEDPRL 101          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A8M1KIQ6_CLUHA (E3 ubiquitin-protein ligase NEDD4-like isoform X1 n=2 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KIQ6_CLUHA)

HSP 1 Score: 59.7 bits (143), Expect = 1.070e-5
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 0
Query:  375 SNIMPSAQGPHPGGGMSLPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            S+I P   GP       LPPGWE RV +DGR+ YIDHN+KTTQW  P +
Sbjct:   95 SSIDPGDLGP-------LPPGWEERVHSDGRIFYIDHNTKTTQWEDPRL 136          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: A0A7E4UYV5_PANRE (HECT-type E3 ubiquitin transferase n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4UYV5_PANRE)

HSP 1 Score: 60.1 bits (144), Expect = 1.090e-5
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0
Query:  388 GGMSLPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            G + LPPGWEARV A GRV+Y+DH ++TT W PPT+
Sbjct:  324 GSLVLPPGWEARVDAKGRVIYLDHVNRTTTWKPPTV 359          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: UPI0018ECDFB7 (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEDD4-like n=1 Tax=Micropterus salmoides TaxID=27706 RepID=UPI0018ECDFB7)

HSP 1 Score: 59.7 bits (143), Expect = 1.160e-5
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:  375 SNIMPSAQGPHPGGGMSLPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            +++ PS  GP       LPPGWE RV ADGR+ YIDHN++TTQW+ P +
Sbjct:  164 ASLDPSDLGP-------LPPGWEERVHADGRIFYIDHNTRTTQWDDPRL 205          
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Match: UPI0018EBFC20 (E3 ubiquitin-protein ligase NEDD4-like isoform X1 n=4 Tax=Micropterus TaxID=27705 RepID=UPI0018EBFC20)

HSP 1 Score: 59.7 bits (143), Expect = 1.410e-5
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:  375 SNIMPSAQGPHPGGGMSLPPGWEARVQADGRVLYIDHNSKTTQWNPPTI 423
            +++ PS  GP       LPPGWE RV ADGR+ YIDHN++TTQW+ P +
Sbjct:  483 ASLDPSDLGP-------LPPGWEERVHADGRIFYIDHNTRTTQWDDPRL 524          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig903.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDA6_9STRA3.200e-2734.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3YP69_9EUKA3.410e-1025.25Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A0S7F0Y0_9TELE2.140e-668.75NED4L (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A6G0V353_9BILA3.060e-649.23HECT-type E3 ubiquitin transferase n=1 Tax=Halicep... [more]
A0A0S7EGK8_9TELE3.150e-662.50NED4L (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A0S7EMT4_9TELE7.180e-662.50NED4L (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A8M1KIQ6_CLUHA1.070e-555.10E3 ubiquitin-protein ligase NEDD4-like isoform X1 ... [more]
A0A7E4UYV5_PANRE1.090e-563.89HECT-type E3 ubiquitin transferase n=1 Tax=Panagre... [more]
UPI0018ECDFB71.160e-553.06LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase N... [more]
UPI0018EBFC201.410e-553.06E3 ubiquitin-protein ligase NEDD4-like isoform X1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 391..423
e-value: 4.4E-10
score: 49.5
IPR001202WW domainPFAMPF00397WWcoord: 392..421
e-value: 5.8E-9
score: 35.9
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 390..423
score: 16.589199
IPR001202WW domainCDDcd00201WWcoord: 393..423
e-value: 1.31333E-9
score: 51.3746
NoneNo IPR availableGENE3D2.20.70.10coord: 390..438
e-value: 3.6E-15
score: 57.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..343
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 387..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig903contigA-nodosum_M_contig903:220559..245536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig903.32.1mRNA_A-nodosum_M_contig903.32.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig903 220373..246717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig903.32.1 ID=prot_A-nodosum_M_contig903.32.1|Name=mRNA_A-nodosum_M_contig903.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=586bp
MCCRKKVAPKLTPGDRLTFKSEEQDDSSQVNVEEVIEAQRSQIVNMLLKG
NIYGLPGSDGTRWSNFREWAKNQHPLLSMCMAHELHPFSRIERLSVMMCY
LSWAFFITIVFEGAEYKKQSICEQGCVETCCNDEGKSWCGAGSGTNSDEI
TVEVYEAACSNPMPWWILSFIIAGCTVPYSTVLKVAATCACVQSMPRCIK
DCFECIGGVMLQLFGVLSVVWLVFGITLSLELDDDGAFMATYVTGVVKSW
FYWPILAGASFLYKYKKKKAEFEEKHPGQVSMAWPINVEDSSLDLRMGVD
GKPIAYRSPSGSPTAAKMAQHQQEENTPLPTPNPKQAQQPGNPAGIVLMQ
QNMQLPRLPLSSMVVGTHQSGAGMSNIMPSAQGPHPGGGMSLPPGWEARV
QADGRVLYIDHNSKTTQWNPPTITIQQQQQQHMTPLPGYYNIQQHILGGN
YPSQQIISSYPLEQVGLVGNGGVAQFSPGAYSSHQQVDSGVASRSSYEAS
MPAGNLQPMLRSYMGQKITAFSKQIRPSAGTSAAAPNPAVMLFQVPEGVS
EGGDVEITSPSGVSMKVTIPAGASAGDTLQIPIPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf