prot_A-nodosum_M_contig903.30.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig903.30.1
Unique Nameprot_A-nodosum_M_contig903.30.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length495
Homology
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BLAST of mRNA_A-nodosum_M_contig903.30.1 vs. uniprot
Match: D7G7F5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F5_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 4.670e-13
Identity = 73/186 (39.25%), Postives = 96/186 (51.61%), Query Frame = 0 
Query:  304 GASADASTRNVSSMKRVPSSARTATGIMAAEEPAKYVSRPMRTVKRSVGGAAAGRGRGRDRAIVGEHGRGSTGGNGGQSRGPVKKTRNAPGPVGGRGGGFGVGTRGKFAARPSEPALVLDAELEARLAAHNKDVTKGKHTYEPKRS-IRDCRMWEAKTGKVYMSLMVDERIEANKEIDAMRAAIRD 488
            GA A+A  +NVSS   VP S            P K VS+P+ TVKRSV G  +G         VG          G + +GP   + N       R  G     +   A      AL  D +L+A+LAAHN+ VTKG+HTYEP +  ++D + WE+KTGK Y SL  DE+ +AN+EI AM AA +D
Sbjct:  529 GAEAEAK-KNVSSSTNVPRS-----------NP-KTVSKPVTTVKRSVSGNGSG---------VGGPKSAREQSTGVKRKGPTVLSSNVTDRTKRRPSGKNKTDKDDSA------ALSFDEDLKAKLAAHNRGVTKGRHTYEPSKGRVKDWKKWESKTGKKYYSLNPDEKADANREILAMLAAEKD 686
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BLAST of mRNA_A-nodosum_M_contig903.30.1 vs. uniprot
Match: A0A6H5JVQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVQ5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.070e-12
Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 0 
Query:  419 ALVLDAELEARLAAHNKDVTKGKHTYEPKRS-IRDCRMWEAKTGKVYMSLMVDERIEANKEIDAMRAAIRD 488
            AL  D +L+A+LAAHN+ VTKG+HTYEP +  ++D + WE+KTGK Y SL  DE+ +AN+EI AM AA +D
Sbjct:  598 ALSFDEDLKAKLAAHNRGVTKGRHTYEPSKGRVKDWKKWESKTGKKYYSLNPDEKADANREILAMLAAEKD 668
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig903.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7F5_ECTSI4.670e-1339.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVQ5_9PHAE1.070e-1256.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig903contigA-nodosum_M_contig903:197733..203650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig903.30.1mRNA_A-nodosum_M_contig903.30.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig903 197721..204202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig903.30.1 ID=prot_A-nodosum_M_contig903.30.1|Name=mRNA_A-nodosum_M_contig903.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=495bp
MSAHGSGTVTGTVGGTPASHEPEQAGPCFGGRNDFVEFFGGVSFDGSGTL
DDLLKSDEPPSPSTMAANERWLQTPHPEHFFKESDGFVEEEKIRNPPPPA
TSSSPATFALTVNKTHNRAAGDARGTRNSAQFDPGFARHGEENLNGRDLV
RRAKRQRQSTIMTAKGVATKEARAEGGIRRGNTRRRDTCGASVLKENNPA
KNDPMKKKLQEYKRSVKASSSTPAESSERRAREGCGGAKTNSTVTASRIR
GTRSVNARKAPSTSSPGVLGVAGTAPAVASVGAGAAPAKRPALRRVAASA
NSRGASADASTRNVSSMKRVPSSARTATGIMAAEEPAKYVSRPMRTVKRS
VGGAAAGRGRGRDRAIVGEHGRGSTGGNGGQSRGPVKKTRNAPGPVGGRG
GGFGVGTRGKFAARPSEPALVLDAELEARLAAHNKDVTKGKHTYEPKRSI
RDCRMWEAKTGKVYMSLMVDERIEANKEIDAMRAAIRDEAFAGH*
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