prot_A-nodosum_M_contig90.33.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig90.33.1
Unique Nameprot_A-nodosum_M_contig90.33.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length897
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 398..464
e-value: 7.1E-9
score: 37.8
coord: 246..310
e-value: 2.3E-9
score: 39.4
coord: 475..539
e-value: 3.9E-10
score: 41.8
coord: 323..388
e-value: 5.6E-7
score: 31.7
coord: 141..208
e-value: 8.5E-8
score: 34.4
coord: 626..691
e-value: 1.5E-9
score: 40.0
coord: 551..618
e-value: 2.1E-10
score: 42.7
coord: 703..767
e-value: 9.0E-7
score: 31.1
coord: 65..130
e-value: 3.3E-10
score: 42.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 828..854
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 232..266
e-value: 2.1E-8
score: 34.6
coord: 163..196
e-value: 1.2E-5
score: 25.8
coord: 346..379
e-value: 2.4E-4
score: 21.6
coord: 692..721
e-value: 4.1E-4
score: 20.9
coord: 729..757
e-value: 0.0014
score: 19.2
coord: 422..456
e-value: 3.4E-6
score: 27.5
coord: 125..158
e-value: 0.0015
score: 19.1
coord: 536..570
e-value: 3.8E-7
score: 30.5
coord: 612..645
e-value: 1.4E-5
score: 25.6
coord: 574..607
e-value: 5.6E-4
score: 20.5
coord: 49..82
e-value: 3.0E-4
score: 21.3
coord: 87..121
e-value: 2.1E-9
score: 37.7
coord: 498..531
e-value: 2.8E-6
score: 27.8
coord: 460..493
e-value: 1.7E-5
score: 25.3
coord: 270..301
e-value: 0.019
score: 15.6
coord: 650..684
e-value: 5.5E-9
score: 36.4
coord: 201..231
e-value: 6.3
score: 7.5
coord: 384..418
e-value: 4.7E-9
score: 36.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig90contigA-nodosum_M_contig90:492347..495172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig90.33.1mRNA_A-nodosum_M_contig90.33.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig90 491980..496493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig90.33.1 ID=prot_A-nodosum_M_contig90.33.1|Name=mRNA_A-nodosum_M_contig90.33.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=897bp
MVDVSYSYRKRRTEGCGKRTTFGATGTRMTEYCTRDTKSGMGDVRRKKCI
NEGCGKRSTFGVAGTKMANYCAQHAKNGMVDVCSKKCKTEGCGKRPSFGV
AGTRVVEYCAQHAPDGMVNVRSKKCRTEGCGKCAWFGVAGTRMVEYCAQH
APDEMVDVCSRKCRTEGCSKRSSFGVAGTRTVEYCAQHSKNGMVNVCSRK
CRTEGCSKRSLFRVAGTRTVEYCAQHSKNGMCKTEGCGKRPSFGVAGTRM
MEYCAHHAKDGMVNVRSRKCRTKGCGKCPAVVGTKMAEYCAQHAPDGMVD
VCYSYRKRRTEGCGKRTTFGVTGTRMTEYCTRDTKGGMGDVCTKKCRTEG
CGKRSSFGVAGTKMANYCAQHAKNGMVDVCSKKCKTEGCGRRPSFGVAGT
RMAEYCAQHAPDGMVNVRRKKCRTEGCGKCASFGVVGTRMVEYCAQHAPD
EMVDVYSRKCRTEGCSKRSSFGVAGTRTVEYCAQHSKNGMVDVCSRKCKT
EGCGKRPSFGVAGTKMAKYCAQHAKNGMVDVCSIKCKTEGCGKRPSFGVA
GTRMMEYCAHHAKNGMVNVRNRKCRTRGCGKCPSFGVAGTKMAEYCAQHA
KNGMVDVCSRKCTDDSCSKRSSFGVAGTKITNYCAQHAKSGMVDVCSKKC
KTEGCGRRPSFGVAGTRMVEYCAQHAPDGMVNVRSRKGRTEGCGKYPSFG
VAGTRMVEYCAQHAKNGMADVCSKKYRTEGCGKQPSFGVAGTRTAEYCAF
HAPDEMVKFSLNCARRGCNKHTPFGGAGVRQVKYCAHHTRPTRGVGGYGR
REIGPHRSGKETIGDPCSSGVKRKTIHPYTAQASPLSGGSGGSRKRVPLP
DMTSTALKRAIAQQSAAGAVTLPWSDGQKSPIKRDSYLKTELQLSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys