prot_A-nodosum_M_contig90.27.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig90.27.1
Unique Nameprot_A-nodosum_M_contig90.27.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length249
Homology
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: D7FZW6_ECTSI (Complex I intermediate-associated protein 30, mitochondrial (NADH dehydrogenase [ubiquinon) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW6_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.730e-133
Identity = 182/267 (68.16%), Postives = 207/267 (77.53%), Query Frame = 0
Query:    1 MARIVQTYRKYWPTDAALKGKIVLEDLMLCSFSFKELVEPWDISTDRKWGGKSQATATWHPWETKGNT------------------ADAQPWRLVHGQPAKAAPLGMIQSEGPLTGDEDDAAPPLSDGGFLRFSGELSVEKTARAKIGGFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIRDVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            MAR+ +TYRKYWPTDA LKG  VLEDLMLCSFS K+L+  WD++TD+ WGGKS AT +W PWE  G T                   D QPWRL  G PA AAP G++QSEG   GDE++ APPL  GGF  FSGELS E+ ARAK+GGFCGTR  RR+EPLVLPDGY GVEMRIRTDGR YEVNFEPQSGI+NDLYQGY+R P G+W T++LPL RLLLTGQGQIRD+QRKWD GMEL+SIGFTIAD VGGPF+LDVAW+ALV +V
Sbjct:    1 MARVARTYRKYWPTDAVLKGTAVLEDLMLCSFSTKDLLAGWDVTTDQSWGGKSTATVSWKPWERLGGTDGSASATAADAAAGGACALDVQPWRLFEGTPATAAPRGVLQSEGLPAGDEENTAPPLEKGGFFCFSGELSTERAARAKVGGFCGTRSTRRQEPLVLPDGYRGVEMRIRTDGRQYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDVGMELKSIGFTIADGVGGPFRLDVAWVALVSEV 267          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: A0A6H5KSW2_9PHAE (CIA30 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW2_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 6.920e-44
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 0
Query:  164 YEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIRDVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            YEVNFEPQSGI+NDLYQGY+R P G+W T++LPL RLLLTGQGQIRD+QRKWD GMEL SIGFTIAD VGGPF+LDVAW+ALV +V
Sbjct:   30 YEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDMGMELNSIGFTIADGVGGPFRLDVAWVALVSEV 115          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: A0A835YW63_9STRA (Complex I intermediate-associated protein 30-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW63_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.450e-29
Identity = 62/140 (44.29%), Postives = 85/140 (60.71%), Query Frame = 0
Query:  108 SDGGFLRFSGELSVEKTARAKIGGFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIRDVQRKWDKGMELRSIGFTIADPVG----GPFQLDVAWI 243
            ++GGF+RFSG +S          GFC TR P+R   + L + YEG+ +++RTDGR Y VN EPQ+    DLYQGY+ AP G WT + LP   L+ T +G++ D  R  D  + L S+GF+I   +     GPFQLDV W+
Sbjct:   62 AEGGFMRFSGTVSGVMGRTMARSGFCATRSPKRWRGVDLTE-YEGLALKVRTDGRHYAVNIEPQTYFDTDLYQGYIIAPAGLWTVVTLPFDGLMHTSRGRVVDESRPLD-AVHLLSLGFSIFKEIDKGREGPFQLDVQWV 199          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: G4YLL2_PHYSP (CIA30 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=G4YLL2_PHYSP)

HSP 1 Score: 103 bits (257), Expect = 6.530e-23
Identity = 70/223 (31.39%), Postives = 110/223 (49.33%), Query Frame = 0
Query:   32 FSFKELVEPWDISTDRKWGGKSQATATWHPWETKGNTADAQPWRLVHGQPAKAAPLGMIQSEGPLTGDEDDAAPPLSDGGFLRFSGELSVEKTARAKIG----GFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIR-DVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            F+ KE V  W  S+DR  GG S+                   W   +G+P K       +S+  +   ++    P +      F+G LS++     ++G    G+C  R    +E L+   GYEG+ MRI TDGR Y +N + +S    +L+ G+LR PP EW  + LP +  LLT +G ++ D + + D   +L+S+GF IAD   G F+L + WI  V ++
Sbjct:   37 FNAKESVANWTASSDRSIGGLSECK-----------------WGFYNGEPEKEVEEEEFKSKRLIHAVKNKDNVPSAV-----FTGRLSMD-CQPTEVGVVRSGYCAVRASVPQELLL--HGYEGISMRIMTDGREYRMNVQMESWNPFNLHMGFLRTPPNEWVDVTLPFRDFLLTAKGFVKLDDETELDPS-KLKSVGFAIADQKEGDFELRIQWIKAVAQL 233          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: W7U321_9STRA (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U321_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.140e-22
Identity = 71/213 (33.33%), Postives = 103/213 (48.36%), Query Frame = 0
Query:   41 WDISTDRKWGGKSQATATWHPWETKGNTADAQPWRLVHGQPAKAAPLGMIQSEGPLTGDEDDAAPPLSDGGFLRFSGELSVEKTAR---AKIGGFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRA-PPGEWTTLALPLKRLLLTGQGQIRDVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            W + TDR  GGKS+A+       T GN                  P+          G   +  PP +      FSG LS  + A     K  G+C  +    +   V  +GYEG+E+ +RTDGR Y  N E +S   ++LYQGY+   P G+W T+ LP + + LT  G++  +Q++ D    L SIGF IAD   GPF L++A +A V ++
Sbjct:   44 WSVFTDRSIGGKSEAS---FEVSTTGNH-----------------PINETD------GHTGEIRPPSAT-----FSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRV--EGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRI 223          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: F0W2C2_9STRA (Uncharacterized protein AlNc14C9G1172 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2C2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.950e-22
Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 0
Query:  115 FSGELSV--EKTARAKI-GGFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIRDVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            FSG LS+  E T    +  G+C  R PR KE  +   G +G++MR++TDGR++ VN + +     D++ G++RAPP +W  + LP   LLLT +G ++          +L +IGF I+D   GPF+L V WI  +  +
Sbjct:   47 FSGRLSMACEPTEAGVVRSGYCAVRAPRPKEVQLF--GSQGLQMRVKTDGRIFRVNIQTEGWNPFDIHMGFIRAPPSKWVDIELPFSSLLLTSRGYVKMDDATVLYPSKLLNIGFAISDQEEGPFELRVQWIKAIADM 182          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: A0A3M6VIB4_9STRA (CIA30 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIB4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 9.290e-21
Identity = 69/222 (31.08%), Postives = 102/222 (45.95%), Query Frame = 0
Query:   32 FSFKELVEPWDISTDRKWGGKSQATATWHPWETKG---NTADAQPWRLVHGQPAKAAPLGMIQSEGPLTGDEDDAAPPLSDGGFLRFSGELSVEKTARAKIGGFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIR-DVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            F+ K+ V  W  S+DR  GG S+    +   E +    N  +    R +H                    +  D  P     G L    + +     R+   G+C  R      P +L  GYEG+ MRI TDGR Y +N + +S    +LY G++R PP EW  + LP +  LLT +G ++ D + + D   +L+S+GF IAD   G F+L V WI  V K+
Sbjct:   37 FNAKDSVVNWTASSDRSIGGLSECQWGFFSGEAENKSTNEVEKVSTRFIHKV------------------NIHDNVPSAVFAGRLSMDCQPTEVGVVRS---GYCAVRAS--VPPELLLHGYEGIAMRIMTDGREYRMNMQMESWNPFNLYMGFIRTPPNEWVDINLPFQDFLLTAKGFVKIDDETELDPS-KLKSVGFAIADQKEGDFELRVQWIKAVAKL 234          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: A0A8J5JCY6_9STRA (CIA30 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCY6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.520e-20
Identity = 73/232 (31.47%), Postives = 112/232 (48.28%), Query Frame = 0
Query:   32 FSFKELVEPWDISTDRKWGGKSQATATWHPWE-TKGNTADAQPW-RLVHGQPAKAAPLGMIQSEGPLTGDEDDAAPPLSDGGFLRFSGELSVEKTARAKIG----GFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIR-DVQRKWDKGM-------ELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            F+ KE V  W  S+DR  GG S+    ++  E TK  T + Q   RL+H           ++++        D  P         F+G LS++     ++G    G+C  R    +E L+   GYEG+ MRI TDGR Y +N + +S    +LY G++R PP EW  + LP +  LLT +G ++ D + + D           L ++GF IAD   G F+L + WI  V ++
Sbjct:   37 FNAKESVANWTASSDRSIGGLSECKWGFYKGEQTKETTEEEQTSKRLIH----------HVKNQ--------DNVPSAV------FTGRLSMD-CQPTEVGVVRSGYCAVRASVPQELLL--HGYEGITMRIMTDGREYRMNVQMESWNPFNLYMGFIRTPPNEWVDITLPFRDFLLTAKGFVKLDDETELDPSKLKSVRFAPLHTVGFAIADQKEGDFELRIQWIKAVAQL 241          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: A0A3R7NKC4_9STRA (CIA30 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NKC4_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.960e-20
Identity = 67/223 (30.04%), Postives = 109/223 (48.88%), Query Frame = 0
Query:   32 FSFKELVEPWDISTDRKWGGKSQATATWHPWETKGNTADAQPWRLVHGQPAKAAPLGMIQSEGPLTGDEDDAAPPLSDGGFLRFSGELSVEKTARAKIG----GFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIR-DVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            F+ K+ V  W  S+DR  GG S+    ++    K      +   +     A      ++ S      +E D  P         F+G+LS++     ++G    G+C  R    +E L+   GYEG+ MR+ TDGR Y VN + +S    +LY G++R P  +W  ++LP    +LT +G ++ D + + D   +L+SIGF IAD   G F+L + WI  V ++
Sbjct:   37 FNAKDSVANWTASSDRSIGGLSECKWGFYKGAAKEEAVTKE--NVEEKAAAHKEDKRIVDSV-----NEKDNVPSAV------FTGKLSMD-CQPTEVGVVRSGYCAVRASVPRELLL--HGYEGIRMRVMTDGRDYRVNVQMESWNPFNLYMGFIRTPANKWVDISLPFTDFMLTAKGYVKLDDETELDPS-KLKSIGFAIADQKEGDFELRIQWIKAVAQI 242          
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Match: A0A0P1AZQ6_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZQ6_PLAHL)

HSP 1 Score: 96.7 bits (239), Expect = 4.360e-20
Identity = 64/218 (29.36%), Postives = 100/218 (45.87%), Query Frame = 0
Query:   32 FSFKELVEPWDISTDRKWGGKSQATATWHPWETKGNTADAQPWRLVHGQPAKAAPLGMIQSEGPLTGDEDDAAPPLSDGGFLRFSGELSVEKTARAKIGGFCGTRPPRRKEPLVLPDGYEGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRLLLTGQGQIRDVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV 249
            F  KE V  W  S+D+  GG S+    ++  E     +D +  ++      K   +      G L+    D  P  ++ G +R                G+C  R     + L+   GYEG+ MRI TDGR Y +N + +S    +L+ G++R PP EW  + LP +  LLT +G ++          +L+SIGF IAD   G F+L + WI  V ++
Sbjct:   71 FDAKESVAEWTASSDKSIGGLSKCKWGFYTGEEPMKASDDKASKIFIQNVKKQDRIASAVFTGNLS---MDCQP--TEAGVIRS---------------GYCAVRASTSSDLLL--HGYEGISMRIMTDGREYRMNIQMESWNPFNLFIGFIRTPPNEWVDIDLPFRNFLLTAKGFVKITDETKLDPSKLKSIGFAIADQREGEFELRIQWIKAVAQL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW6_ECTSI1.730e-13368.16Complex I intermediate-associated protein 30, mito... [more]
A0A6H5KSW2_9PHAE6.920e-4480.23CIA30 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YW63_9STRA3.450e-2944.29Complex I intermediate-associated protein 30-domai... [more]
G4YLL2_PHYSP6.530e-2331.39CIA30 domain-containing protein n=14 Tax=Phytophth... [more]
W7U321_9STRA3.140e-2233.33NADH:ubiquinone oxidoreductase intermediate-associ... [more]
F0W2C2_9STRA4.950e-2236.96Uncharacterized protein AlNc14C9G1172 n=1 Tax=Albu... [more]
A0A3M6VIB4_9STRA9.290e-2131.08CIA30 domain-containing protein n=1 Tax=Peronospor... [more]
A0A8J5JCY6_9STRA1.520e-2031.47CIA30 domain-containing protein n=1 Tax=Phytophtho... [more]
A0A3R7NKC4_9STRA2.960e-2030.04CIA30 domain-containing protein n=3 Tax=Phytophtho... [more]
A0A0P1AZQ6_PLAHL4.360e-2029.36Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013857NADH:ubiquinone oxidoreductase intermediate-associated protein 30PFAMPF08547CIA30coord: 31..240
e-value: 1.0E-24
score: 87.2
IPR039131Complex I intermediate-associated protein 30, mitochondrialPANTHERPTHR13194COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30coord: 28..246
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 105..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig90contigA-nodosum_M_contig90:380622..390902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig90.27.1mRNA_A-nodosum_M_contig90.27.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig90 380622..390902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig90.27.1 ID=prot_A-nodosum_M_contig90.27.1|Name=mRNA_A-nodosum_M_contig90.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=249bp
MARIVQTYRKYWPTDAALKGKIVLEDLMLCSFSFKELVEPWDISTDRKWG
GKSQATATWHPWETKGNTADAQPWRLVHGQPAKAAPLGMIQSEGPLTGDE
DDAAPPLSDGGFLRFSGELSVEKTARAKIGGFCGTRPPRRKEPLVLPDGY
EGVEMRIRTDGRLYEVNFEPQSGILNDLYQGYLRAPPGEWTTLALPLKRL
LLTGQGQIRDVQRKWDKGMELRSIGFTIADPVGGPFQLDVAWIALVCKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013857NADH-UbQ_OxRdtase-assoc_prot30
IPR039131NDUFAF1
IPR008979Galactose-bd-like_sf