prot_A-nodosum_M_contig9.47.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9.47.1
Unique Nameprot_A-nodosum_M_contig9.47.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length136
Homology
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 6.420e-68
Identity = 105/132 (79.55%), Postives = 117/132 (88.64%), Query Frame = 0
Query:    1 MSLLRRSPLEFVRALARGCKNPRKGQISKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETLASR-IASGEL 131
            MSLLRR+ +  ++ LARGCKNP+K Q SKRSQIGLYAGKDI FGNTISFSHKKNRRTWKPNVQKKAL+SE LD+WIKFNLTTHALRCVD+AGGIDKYLLK PD+WLNS QG  AKRKI+E LA+R  +SGEL
Sbjct:    1 MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGEL 132          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: A0A7S3ZX50_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX50_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.210e-38
Identity = 65/98 (66.33%), Postives = 77/98 (78.57%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETLASR 125
            S RS+ G+YAGKDIRFGN ISFSH+K RRT+KPN Q+K L+SE L  W++FNLTTHALRC+D+AGGID YLLK PD  L S  G NA+R I+   ASR
Sbjct:   60 SNRSKRGIYAGKDIRFGNNISFSHRKTRRTFKPNAQRKRLWSETLGCWLRFNLTTHALRCIDRAGGIDAYLLKTPDAKLGSIAGANARRMIEAARASR 157          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.930e-35
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:   26 QISKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETLASR 125
            + S R+  GL+ GKD+RFGN +S S +K RR WKPNVQ+K L+SE L D+++FN+T HA+RCVDKAGG+D YLL +PDK L S QG+ AK KI E L ++
Sbjct:   14 RTSGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKIIEKLQAK 113          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: A0A7S2C450_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C450_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.900e-34
Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETLASR 125
            S R+  GLY GKD+ FGN +S S +K RR WKPNVQKK L+SE L DW+KFN+TT A+RCVDKAGG+D YLL + D  + S QG+ AKR+I+  LA +
Sbjct:   42 SGRAARGLYGGKDVGFGNMVSHSERKTRRMWKPNVQKKRLWSESLGDWVKFNVTTQAMRCVDKAGGLDNYLLGLKDGKIGSIQGLAAKRRIEAALAEK 139          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: A0A7S2RZD4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZD4_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.480e-32
Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:   26 QISKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETLASR 125
            + S R+  GL+  KDIRFGN +S S +K RR+WKPN Q K L+SE L++++KF  TT+ L+C+DK GG+D YLL+ PDK LNS  G+ AKR+I+E L  R
Sbjct:   16 RASGRALRGLFGNKDIRFGNKVSHSERKTRRSWKPNAQNKRLWSETLEEFLKFKTTTYVLKCIDKVGGLDNYLLRTPDKKLNSITGLAAKRRIEEVLQQR 115          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: A0A7S3K4M7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.680e-30
Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETL 122
            S R++ GLY  KD+R GN++SFS +K RR WKPNVQ K  +S+IL  W++F +TTHA++C+DK GGIDKY+L+ P+  LNS  G NAKR +   L
Sbjct:   37 SNRAKRGLYHLKDVRSGNSVSFSERKTRRKWKPNVQTKKFWSQILCCWLRFKVTTHAIKCIDKKGGIDKYILETPESKLNSIAGNNAKRMLLSKL 131          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: F4Q7J9_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q7J9_CAVFA)

HSP 1 Score: 113 bits (283), Expect = 1.400e-29
Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 0
Query:    1 MSLLRRSPLEFVRALARGCKNPRKGQISKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETL 122
            MS+L      F +A +    NP    + KRSQ GLY GK I++GN ISFSHKK RR WKPNVQ K  FS +LD  +K N+TT+ +RC+DKAG  D Y+LK  +K + S  G + K  ++  L
Sbjct:    1 MSMLGNIVSSFTKAASL---NPHYANLMKRSQRGLYGGKLIQYGNIISFSHKKTRRNWKPNVQAKTYFSHLLDAEVKVNVTTYTIRCIDKAGTFDNYILKTKNKDMASELGTDLKSVLKNVL 119          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: D3BM00_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BM00_POLPP)

HSP 1 Score: 112 bits (281), Expect = 2.500e-29
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   17 RGCKNPRKGQISKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETL 122
            R   NP    I KR+Q  LY G+ I++GN+ISFSHKK RRTWKPNVQ K   S+IL+  IK ++TT+ +RC+DKAG  D Y++   DK L+S  G + K  ++ TL
Sbjct:   14 RASNNPHSANILKRAQRALYGGRTIQYGNSISFSHKKTRRTWKPNVQSKTYHSDILNQDIKVDVTTYTMRCIDKAGNFDNYIINTKDKDLDSKLGSDLKVLLKSTL 119          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: M4BCI6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCI6_HYAAE)

HSP 1 Score: 110 bits (274), Expect = 1.660e-28
Identity = 55/122 (45.08%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    7 SPLEFVRALARGCKNPRKGQISKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETLASRIAS 128
            SPL F+ A  R  K   +  +S R+Q GL+AG+D  FGN +SFS ++ RR WK N Q K+L+SE LD+ +  N+TTH LRCVDK GG+D YLL + D+     +G+  + +I+  +A+  AS
Sbjct:    4 SPLRFLEAFTRASK---RQHVSGRAQRGLFAGRDKAFGNNVSFSKRRTRRDWKVNHQWKSLYSETLDEKVGLNVTTHTLRCVDKCGGLDNYLLSLKDERALGVKGLATRDRIRSVMATTNAS 122          
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Match: A0A662WLH2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLH2_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.580e-28
Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 0
Query:    7 SPLEFVRALARGCKNPRKGQISKRSQIGLYAGKDIRFGNTISFSHKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLKMPDKWLNSSQGVNAKRKIQETLA 123
            S + F+ A  R  K   +  +S R+Q GL+AG+D RFGN +SFS ++ RR WK N Q K L+SE LD+ +  N+TTH LRCVDK GG+D YLL + D+     +G+  + +++E LA
Sbjct:    5 SSMRFLEAFTRAAK---REHVSGRAQRGLFAGRDKRFGNNVSFSKRRTRRAWKVNHQWKTLYSEALDEKVGLNVTTHTLRCVDKIGGLDNYLLSIKDEAELGVKGLKTRDRVREALA 118          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS33_9PHAE6.420e-6879.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZX50_9STRA1.210e-3866.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2HHC9_9STRA7.930e-3558.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2C450_9STRA4.900e-3459.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RZD4_9STRA6.480e-3254.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K4M7_9STRA3.680e-3054.74Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F4Q7J9_CAVFA1.400e-2947.54Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
D3BM00_POLPP2.500e-2950.00Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
M4BCI6_HYAAE1.660e-2845.08Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A662WLH2_9STRA4.580e-2845.30Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037147Ribosomal protein L28/L24 superfamilyGENE3D2.30.170.40Ribosomal protein L28/L24coord: 31..105
e-value: 5.7E-22
score: 79.5
IPR026569Ribosomal protein L28/L24PFAMPF00830Ribosomal_L28coord: 36..91
e-value: 1.2E-20
score: 73.4
IPR026569Ribosomal protein L28/L24PANTHERPTHR1352839S RIBOSOMAL PROTEIN L28, MITOCHONDRIALcoord: 15..123
IPR001383Ribosomal protein L28HAMAPMF_00373Ribosomal_L28coord: 27..97
score: 13.507207
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 31..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9contigA-nodosum_M_contig9:902339..907025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9.47.1mRNA_A-nodosum_M_contig9.47.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9 902339..907025 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9.47.1 ID=prot_A-nodosum_M_contig9.47.1|Name=mRNA_A-nodosum_M_contig9.47.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp
MSLLRRSPLEFVRALARGCKNPRKGQISKRSQIGLYAGKDIRFGNTISFS
HKKNRRTWKPNVQKKALFSEILDDWIKFNLTTHALRCVDKAGGIDKYLLK
MPDKWLNSSQGVNAKRKIQETLASRIASGELAGRAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037147Ribo_L28/L24_sf
IPR026569Ribo_L28/L24
IPR001383Ribosomal_L28
IPR034704L28p-like