prot_A-nodosum_M_contig897.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig897.18.1
Unique Nameprot_A-nodosum_M_contig897.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length196
Homology
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BLAST of mRNA_A-nodosum_M_contig897.18.1 vs. uniprot
Match: D8LEJ5_ECTSI (GRIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ5_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.950e-14
Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 0 
Query:   25 LKTQLE-KKHENESITSRLNELAQRYRALQQED---------------EARKAEYNSAAAELVADMERQLAASDEKAVDLAGRCEVAEAGHERIEGSLKIALSRVVDLDSSANSATA-----SVAAVEKELRAAXXXXXXXXDEKEETLTKLEAKTAEFQNIVRR 168
            L+ QL+ K+ EN+ + +RL ELAQR+RALQQE                 A  A   S  AE +AD ER++ A+DE+A +LA RCE AEA H R   SLK A+ R+  LD++A +        +VAA+E  + +         +EKEE  T+LEAKTA+F+ ++ R
Sbjct:  379 LQAQLDLKQAENDKLMARLRELAQRFRALQQEQLRSAGXXXXXXXXXXAATAAVAPSDVAEQLADAERRVTAADERAAELARRCEEAEAEHGRASESLKEAVERLAALDATAAAGGGERTEKTVAALEASVASLAGELKASREEKEEVSTQLEAKTADFEKMLGR 543
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BLAST of mRNA_A-nodosum_M_contig897.18.1 vs. uniprot
Match: A0A6H5K2N6_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N6_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 7.430e-14
Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 0 
Query:   25 LKTQLE-KKHENESITSRLNELAQRYRALQQEDEARKAEYN----------------SAAAELVADMERQLAASDEKAVDLAGRCEVAEAGHERIEGSLKIALSRVVDLDSSANSATA-----SVAAVEKELRAAXXXXXXXXDEKEETLTKLEAKTAEFQNIVRRVFYV 172
            L+ QL+ K+ EN+ + +RL +LAQRYRALQQE +                       S  AE + D ER++ A+DE+A +LA RCE AEA H R   SLK A+ R+  LD++A +        +VAA+E  + +         +EKE+  T+LEAKTA+F+ +V  +F++
Sbjct:  383 LQAQLDLKQAENDKLMARLRDLAQRYRALQQEHQRPAGXXXXXXXXXXXXXXXXVVPSDVAEQLGDAERRVTAADERAAELARRCEEAEAEHRRASESLKEAVERLAALDATAAAGGGERMEETVAALEARVASLAGELKASREEKEDVSTQLEAKTADFEKMVGYLFFL 552
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig897.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEJ5_ECTSI2.950e-1440.61GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K2N6_9PHAE7.430e-1437.65GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..62
NoneNo IPR availableCOILSCoilCoilcoord: 120..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig897contigA-nodosum_M_contig897:156243..156830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig897.18.1mRNA_A-nodosum_M_contig897.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig897 144165..157178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig897.18.1 ID=prot_A-nodosum_M_contig897.18.1|Name=mRNA_A-nodosum_M_contig897.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=196bp
MAAAASTAPGERVEEGGECETVTKLKTQLEKKHENESITSRLNELAQRYR
ALQQEDEARKAEYNSAAAELVADMERQLAASDEKAVDLAGRCEVAEAGHE
RIEGSLKIALSRVVDLDSSANSATASVAAVEKELRAARKELRKAKDEKEE
TLTKLEAKTAEFQNIVRRVFYVDFFCRESNMSVERPRCTSSKAIR*
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