prot_A-nodosum_M_contig893.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig893.11.1
Unique Nameprot_A-nodosum_M_contig893.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length228
Homology
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BLAST of mRNA_A-nodosum_M_contig893.11.1 vs. uniprot
Match: D8LRY9_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.270e-14
Identity = 38/65 (58.46%), Postives = 42/65 (64.62%), Query Frame = 0 
Query:   96 KKRRPGSGGRRCKNEACSRHPHFGFTRPEYCSRHKLSGMFNVKXXXXXXXXXXXXXVYGKKGDPH 160
            KKR+    GRRCK+E C  HPHFG TRPEYCS+HKL GMFNVK             VYG+ GDPH
Sbjct:  592 KKRKRSGNGRRCKHEGCLLHPHFGLTRPEYCSKHKLPGMFNVKGRRCIHPECTRTPVYGRSGDPH 656
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig893.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY9_ECTSI1.270e-1458.46EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 142..176
e-value: 8.2E-6
score: 26.3
coord: 107..138
e-value: 1.6E-5
score: 25.4
coord: 180..214
e-value: 3.5E-8
score: 33.8
NoneNo IPR availableGENE3D6.10.140.110coord: 121..181
e-value: 5.9E-6
score: 28.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig893contigA-nodosum_M_contig893:204919..206360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig893.11.1mRNA_A-nodosum_M_contig893.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig893 204776..206469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig893.11.1 ID=prot_A-nodosum_M_contig893.11.1|Name=mRNA_A-nodosum_M_contig893.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=228bp
MGIDYLVQCMLQQLKVIYLAAEEVRHPTGRVPFGNIRERLLEKQLAAQTP
AAKELLKDHVFCESDSSTGITSADSSAGTATSVRRLPSGASASPKKKRRP
GSGGRRCKNEACSRHPHFGFTRPEYCSRHKLSGMFNVKGRRCINSECSRT
PVYGKKGDPHPTYCAAHKLGNMVDIKNPTCREQSCNRQPSFGSRHDRRAT
YCASHMLGGMVNVRRMLAAKGSSRCSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys