prot_A-nodosum_M_contig891.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig891.8.1
Unique Nameprot_A-nodosum_M_contig891.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length63
Homology
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.230e-28
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFTSKKFLEE 63
            +LGS TSLPAVE+FCLY  TAILFDFFLQ+TAFVALLTMDANRQ AG+ DWCCCFTSKK+L+E
Sbjct:  408 LLGSLTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDWCCCFTSKKYLQE 470          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 3.780e-27
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFTSKKFLEE 63
            MLGS +SLPAVE+FCLY GTAILFDFFLQ+TAFVALLTMDANRQ AG+ D CCCFTSKK+L E
Sbjct:  385 MLGSMSSLPAVEYFCLYAGTAILFDFFLQMTAFVALLTMDANRQKAGKIDSCCCFTSKKYLRE 447          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 2.300e-23
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFTSKKFLEE 63
            +LGS TSLPAVE+FCLY  TAILFDFFLQ+TAFVALLTMDANRQ AG+ D C   TSKK+L+E
Sbjct:  436 LLGSMTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDCCXXLTSKKYLQE 498          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.930e-23
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVT----AFVALLTMDANRQNAGRFDWCCCFTSKKFLEE 63
            MLG  +SLPAVE+FCLY GTAILFDFFL  +    AFVALLTMDANRQ AG+ D CCCFTSKK+L+E
Sbjct:   65 MLGRVSSLPAVEYFCLYAGTAILFDFFLPESKNNRAFVALLTMDANRQKAGKIDSCCCFTSKKYLQE 131          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 4.280e-23
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFTSKKFLEE 63
            +LG+ +SLPAV++FCLY  TAILFDFFLQ+TAFVALLTMDANRQ AG+ D CCCFTS K  E+
Sbjct:  288 LLGAQSSLPAVQYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDCCCCFTSPKHPEK 350          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: A0A1Z5L5E5_ORNMO (SSD domain-containing protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L5E5_ORNMO)

HSP 1 Score: 76.3 bits (186), Expect = 1.060e-14
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFTSK 58
            +LG  T++PAV+ F LY G A+L DF LQVT FVALLT+DA RQ AGR D CC  T+K
Sbjct:  470 LLGGLTTMPAVKTFALYAGVALLIDFLLQVTCFVALLTLDAKRQEAGRLDVCCWATTK 527          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: A0A1Z5KZL9_ORNMO (SSD domain-containing protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KZL9_ORNMO)

HSP 1 Score: 70.5 bits (171), Expect = 1.140e-14
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    8 LPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFTSKK-FLEE 63
            +PAV+ F LY G A+L DF LQVT FVALLT+DA RQ AGR D CC  T+K  ++EE
Sbjct:    1 MPAVKTFALYAGVALLIDFLLQVTCFVALLTLDAKRQEAGRLDVCCWATTKSPWIEE 57          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: A0A7D9D3E9_9COLE (Niemann-Pick type C-1a (Fragment) n=1 Tax=Ocypus brunnipes TaxID=1553593 RepID=A0A7D9D3E9_9COLE)

HSP 1 Score: 75.1 bits (183), Expect = 2.700e-14
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    2 LGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFTSKK 59
            LGS + +PAV  F LY G A+LFDFFLQ+T FV+LL++D  RQ + RFD CCC +  K
Sbjct:  748 LGSLSDMPAVRAFALYAGMALLFDFFLQITCFVSLLSLDTLRQTSNRFDICCCISGSK 805          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: A0A6P7VTG2_IXOSC (NPC intracellular cholesterol transporter 1 n=4 Tax=Ixodes TaxID=6944 RepID=A0A6P7VTG2_IXOSC)

HSP 1 Score: 74.7 bits (182), Expect = 3.690e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFT-SKKFLEE 63
            +LG  +++PAV  F LY G A+L DF LQVT FVALLT+DA RQ A R D CCC + + + LEE
Sbjct:  731 LLGGLSTMPAVRTFALYAGVALLLDFLLQVTCFVALLTLDAKRQRARRLDMCCCISRTPELLEE 794          
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Match: B7Q350_IXOSC (Niemann-Pick type C1 domain-containing protein, putative n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7Q350_IXOSC)

HSP 1 Score: 74.7 bits (182), Expect = 3.690e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFDWCCCFT-SKKFLEE 63
            +LG  +++PAV  F LY G A+L DF LQVT FVALLT+DA RQ A R D CCC + + + LEE
Sbjct:  677 LLGGLSTMPAVRTFALYAGVALLLDFLLQVTCFVALLTLDAKRQRARRLDMCCCISRTPELLEE 740          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig891.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY89_ECTSI1.230e-2882.54Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D7FY98_ECTSI3.780e-2782.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY95_ECTSI2.300e-2376.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGQ4_9PHAE3.930e-2373.13Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LCK4_ECTSI4.280e-2373.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Z5L5E5_ORNMO1.060e-1462.07SSD domain-containing protein (Fragment) n=1 Tax=O... [more]
A0A1Z5KZL9_ORNMO1.140e-1461.40SSD domain-containing protein (Fragment) n=1 Tax=O... [more]
A0A7D9D3E9_9COLE2.700e-1456.90Niemann-Pick type C-1a (Fragment) n=1 Tax=Ocypus b... [more]
A0A6P7VTG2_IXOSC3.690e-1456.25NPC intracellular cholesterol transporter 1 n=4 Ta... [more]
B7Q350_IXOSC3.690e-1456.25Niemann-Pick type C1 domain-containing protein, pu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000731Sterol-sensing domainPFAMPF12349Sterol-sensingcoord: 1..56
e-value: 1.2E-16
score: 61.0
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 1..39
score: 15.350181
NoneNo IPR availablePANTHERPTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1coord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig891contigA-nodosum_M_contig891:253328..254164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig891.8.1mRNA_A-nodosum_M_contig891.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig891 253328..254164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig891.8.1 ID=prot_A-nodosum_M_contig891.8.1|Name=mRNA_A-nodosum_M_contig891.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=63bp
MLGSTTSLPAVEFFCLYTGTAILFDFFLQVTAFVALLTMDANRQNAGRFD
WCCCFTSKKFLEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD