prot_A-nodosum_M_contig89.29.5 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.29.5
Unique Nameprot_A-nodosum_M_contig89.29.5
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length615
Homology
BLAST of mRNA_A-nodosum_M_contig89.29.5 vs. uniprot
Match: D8LBH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH1_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 1.100e-89
Identity = 227/534 (42.51%), Postives = 304/534 (56.93%), Query Frame = 0
Query:   91 SLAIVPYTGGRHLQAGCEMPGLRCRLFNLTSNDQRGIRFAPTSSPVTASTADILSSGGREVSSDLAETRSLKRGFNSSSSNSL--------RQKERPEWVVVSAEQAEHAARKLRSENEKNKTLQARLERHKRDRVLIYDAAMKQAAEREEEGVKDAKRMFERERLVMRAEVDHELLKINDLHEKRCRDYAQMVSDECEEEISKATAELREGWAREKKTIAQIVREGAEEDRQASAMPCVAVIARAVMEHLQEEKKDEVTALREEIYAEVKAEFENREVSMRDALQSEFQADLDGQLLLAEIRHQKEMDQLRTELRRDHAPSAEKADETIVVYSRGTTPKQRDRGDHGNDRXXXXXXXXXXXXXSLPRHSLQQKMPFRGARNGGNDG--GVAPAPAVRGKTGLVKKLPIFRTPAQKA-PASSDIKTTDMKSGRSNEPTAQLRPRIKRFSRSPKTGNIASVMPKPLDYVPQKHQDEDQNENEDDSITSALTVSPTKTSGIAVTPSMGVESTFIEKASTHEPQRPKKRGKRLFTAQ 613
            SLAI+PY+GG       E P    RLF L  + +   +    ++    S   +  +  R     L E   L  G  +    +L        +++ + +W++VS EQ E  A K+R + EKNK L+  ++ HKR+RVLIYDAAMKQAA+RE EGV + K++ ER++ +MRAEVD E+ KI+DL+++RCRDYA MVSDEC+ E SKA  +LR+ WAR+KKTI Q+VR G EEDRQ      V+VIARAV+E LQEE++DE+ +LR  IY++VK EFE+REV++RD L+S+FQADLDGQLLLAEIRHQKEM++LR EL     P+ E     IVVY+   TP+   RG   +               S  R  L  KM    A +GGN G  GV      RG T L +K P+F+TP QK  P +S+ K    K     + T Q  PR     R  +      +               +Q +  D  ITSAL VSPTK     VTPS+G E     + S+    RPKKR K+LF+ +
Sbjct:    3 SLAIIPYSGG----GAAEQPPCH-RLFTLLESSESDAQVLRGAALPHGSFGGLPRNTRR-----LEEGNVLPAGSGTQLGPALPPLNVEGGKERHQSKWMIVSKEQVEQTAEKMRDQAEKNKALETTVKIHKRERVLIYDAAMKQAAKRELEGVNEVKQVLERQQGMMRAEVDQEMQKISDLYQERCRDYATMVSDECDGEDSKAATDLRKDWARQKKTIDQLVRSGGEEDRQ------VSVIARAVVEQLQEERRDEIASLRAAIYSDVKMEFESREVALRDTLESDFQADLDGQLLLAEIRHQKEMNRLRVELAGSEKPTTEAKTGEIVVYN-PETPQCAGRGQRSSGTSSFTPSP------SFSRRPLH-KMNISEA-SGGNSGADGVHVPTTPRG-TQLGRKFPVFKTPVQKQIPGASNKKAVRPKEHPVRDSTRQ--PRNSSVGRHTEISTTTPIR--------------EQEDELDVGITSALMVSPTKAIYGVVTPSIGSEGEVSGEGSS----RPKKRAKKLFSTE 490          
BLAST of mRNA_A-nodosum_M_contig89.29.5 vs. uniprot
Match: A0A6H5KNT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT9_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 2.500e-84
Identity = 198/436 (45.41%), Postives = 265/436 (60.78%), Query Frame = 0
Query:  181 WVVVSAEQAEHAARKLRSENEKNKTLQARLERHKRDRVLIYDAAMKQAAEREEEGVKDAKRMFERERLVMRAEVDHELLKINDLHEKRCRDYAQMVSDECEEEISKATAELREGWAREKKTIAQIVREGAEEDRQASAMPCVAVIARAVMEHLQEEKKDEVTALREEIYAEVKAEFENREVSMRDALQSEFQADLDGQLLLAEIRHQKEMDQLRTELRRDHAPSAEKADETIVVYSRGTTPKQRDRGDHGNDRXXXXXXXXXXXXXSLPRHSLQQKMPFRGARNGGNDG-GVAPAPAVRGKTGLVKKLPIFRTPAQKA-PASSDIKTTDMKSGRSNEPTAQLRPRIKRFSRSPKTGNIASVMP--KPLDYVPQKHQDEDQNENEDDSITSALTVSPTKTSGIAVTPSMGVESTFIEKASTHEPQRPKKRGKRLFTA 612
            W++VS EQ E  A+K+R + EKNK L+  ++ HKR+RVLIYDAAMKQAA+RE EGV + K++ ER++ +MRAEVD E+ KI+DL+++RCRDYA+MVSDEC+ E SKA  +LR+ WAR+KKTI Q+VR   EEDRQ SA      IARAV+E LQEE+ DE+ +LR  IY++VK EFE+REV++RD L+S+FQADLDGQLLLAEIRHQKEM++LR EL     P+ E     I+VY+  T          G+ +                RH  +  +   G  +GGN G G    P     T L +K P+F+TP QK  P   + K    K    ++ T     R  R S + +   I+++ P  +  DY+             D  ITSAL VSPTK     VTPS+G E     + S+    RPKKR K+LF++
Sbjct:  171 WMIVSKEQVEQTAKKMRDQAEKNKALETTVKSHKRERVLIYDAAMKQAAKRELEGVDEVKQVLERQQGMMRAEVDQEMRKISDLYQERCRDYARMVSDECDGEDSKAVTDLRKDWARQKKTIDQLVRSSREEDRQVSA------IARAVVEQLQEERSDEIASLRAAIYSDVKMEFESREVALRDTLESDFQADLDGQLLLAEIRHQKEMNRLRVELAGSEKPTTEAKTSEIIVYNPETLQCA------GSGQRSSGASSFTASPSFSRRHLHKMNI---GEASGGNSGAGGVHVPTTPRGTQLGRKFPVFKTPVQKKIPGIGNKKAVRPKGHPVSDST-----RKSRNSSAGRHTKISTITPIREHEDYL-------------DVGITSALMVSPTKAIHGVVTPSIGSEGGVSGEGSS----RPKKRAKKLFSS 569          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.29.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBH1_ECTSI1.100e-8942.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNT9_9PHAE2.500e-8445.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..216
NoneNo IPR availableCOILSCoilCoilcoord: 226..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:235338..238614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.29.5mRNA_A-nodosum_M_contig89.29.5Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 235077..238755 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.29.5 ID=prot_A-nodosum_M_contig89.29.5|Name=mRNA_A-nodosum_M_contig89.29.5|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=615bp
MENTMPKHCVSQFPGGSLIQQPNSHCPNAQLETTNLGKGTAIQVLPTLPR
RSDALRNSSIAGNLRSDRAETLDSTHDEARPGGSTIEQESSLAIVPYTGG
RHLQAGCEMPGLRCRLFNLTSNDQRGIRFAPTSSPVTASTADILSSGGRE
VSSDLAETRSLKRGFNSSSSNSLRQKERPEWVVVSAEQAEHAARKLRSEN
EKNKTLQARLERHKRDRVLIYDAAMKQAAEREEEGVKDAKRMFERERLVM
RAEVDHELLKINDLHEKRCRDYAQMVSDECEEEISKATAELREGWAREKK
TIAQIVREGAEEDRQASAMPCVAVIARAVMEHLQEEKKDEVTALREEIYA
EVKAEFENREVSMRDALQSEFQADLDGQLLLAEIRHQKEMDQLRTELRRD
HAPSAEKADETIVVYSRGTTPKQRDRGDHGNDRDRDPDPNSSTPSPSLPR
HSLQQKMPFRGARNGGNDGGVAPAPAVRGKTGLVKKLPIFRTPAQKAPAS
SDIKTTDMKSGRSNEPTAQLRPRIKRFSRSPKTGNIASVMPKPLDYVPQK
HQDEDQNENEDDSITSALTVSPTKTSGIAVTPSMGVESTFIEKASTHEPQ
RPKKRGKRLFTAQT*
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