prot_A-nodosum_M_contig89.27.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig89.27.1
Unique Name	prot_A-nodosum_M_contig89.27.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	128

Homology

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A2Z5XCH3_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=16 Tax=Chordariaceae TaxID=66220 RepID=A0A2Z5XCH3_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 5.550e-79
Identity = 119/128 (92.97%), Postives = 126/128 (98.44%), Query Frame = 0

Query:    1 IFSTNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            +FSTNHKDIG+LYL+FG FSGVLGTAMSVLIRLQLA+PGN FLGGN+QLYNVIVTAHAFLM+FFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVE+GAGTGWTVYPPL
Sbjct:   32 LFSTNHKDIGSLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYNVIVTAHAFLMIFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVESGAGTGWTVYPPL 159

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A1L6KY02_9PHAE (Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum fluitans TaxID=143163 RepID=A0A1L6KY02_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 2.770e-78
Identity = 123/127 (96.85%), Postives = 126/127 (99.21%), Query Frame = 0

Query:    2 FSTNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            FSTNHKDIGTLYL+FGAFSGVLGTAMSVLIRLQLA+PGN FLGGNYQLYNVIVTAHAFLM+FFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL
Sbjct:   32 FSTNHKDIGTLYLIFGAFSGVLGTAMSVLIRLQLASPGNTFLGGNYQLYNVIVTAHAFLMIFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 158

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A0U1XAH8_SARHM (Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XAH8_SARHM)

HSP 1 Score: 248 bits (632), Expect = 7.780e-78
Identity = 122/127 (96.06%), Postives = 126/127 (99.21%), Query Frame = 0

Query:    2 FSTNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            FSTNHKDIGTLYL+FGAFSGVLGTAMSVLIRLQLA+PGN FLGGNYQLYNVIVTAHAFLM+FFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSL+LLLASSLVEAGAGTGWTVYPPL
Sbjct:   32 FSTNHKDIGTLYLIFGAFSGVLGTAMSVLIRLQLASPGNTFLGGNYQLYNVIVTAHAFLMIFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLMLLLASSLVEAGAGTGWTVYPPL 158

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A0R5B1C0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=9 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R5B1C0_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 3.930e-77
Identity = 114/126 (90.48%), Postives = 122/126 (96.83%), Query Frame = 0

Query:    3 STNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            STNHKDIGTLYL+FG FSGVLGTAMSVLIRLQLA+PGN FL GN+QLYNVIVTAHAFLM+FFMVMP+LIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLL+SS+VE GAGTGWT+YPPL
Sbjct:    1 STNHKDIGTLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLSGNHQLYNVIVTAHAFLMIFFMVMPILIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLSSSIVETGAGTGWTLYPPL 126

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 6.440e-77
Identity = 120/128 (93.75%), Postives = 126/128 (98.44%), Query Frame = 0

Query:    1 IFSTNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            +FSTNHKDIGTLYL+FG FSGVLGTAMSVLIRLQLA+PGN FLGGN+QLYNVIVTAHAFLM+FFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVE+GAGTGWTVYPPL
Sbjct:   32 LFSTNHKDIGTLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYNVIVTAHAFLMIFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVESGAGTGWTVYPPL 159

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A0S2I710_SACJA (Cytochrome c oxidase subunit 1 n=14 Tax=Saccharina japonica TaxID=88149 RepID=A0A0S2I710_SACJA)

HSP 1 Score: 245 bits (625), Expect = 9.760e-77
Identity = 119/128 (92.97%), Postives = 126/128 (98.44%), Query Frame = 0

Query:    1 IFSTNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            +FSTNHKDIGTLYL+FG FSGVLGTAMSVLIRLQLA+PGN FLGGN+QLYNVIVTAHAFLM+FFMVMP+LIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVE+GAGTGWTVYPPL
Sbjct:   31 LFSTNHKDIGTLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYNVIVTAHAFLMIFFMVMPILIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVESGAGTGWTVYPPL 158

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A8F0K0Q8_9PHAE (Cytochrome c oxidase subunit 1 n=5 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0Q8_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 5.850e-76
Identity = 117/128 (91.41%), Postives = 125/128 (97.66%), Query Frame = 0

Query:    1 IFSTNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            +FSTNHKDIGTLYL+FG FSGVLGTAMSV++RLQL +PGN FLGGN+QLYNVIVTAHAFLM+FFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSL+LLLASSLVEAGAGTGWTVYPPL
Sbjct:   31 LFSTNHKDIGTLYLIFGGFSGVLGTAMSVIVRLQLMSPGNQFLGGNHQLYNVIVTAHAFLMIFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLVLLLASSLVEAGAGTGWTVYPPL 158

[Close]

BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A0R5AZL4_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=87 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R5AZL4_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.850e-75
Identity = 113/126 (89.68%), Postives = 117/126 (92.86%), Query Frame = 0

Query:    3 STNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            STNHKDIGTLYL+FG FSGVLGT MS+ IRLQLA PGN FL  N+QLYNVIVTAHAFLM+FFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSL LLLASSL EAGAGTGWTVYPPL
Sbjct:    1 STNHKDIGTLYLIFGCFSGVLGTTMSIFIRLQLAAPGNQFLANNHQLYNVIVTAHAFLMIFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLFLLLASSLAEAGAGTGWTVYPPL 126

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BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A6B9KBI9_ALAES (Cytochrome c oxidase subunit 1 (Fragment) n=16 Tax=Eukaryota TaxID=2759 RepID=A0A6B9KBI9_ALAES)

HSP 1 Score: 231 bits (589), Expect = 4.490e-75
Identity = 113/121 (93.39%), Postives = 119/121 (98.35%), Query Frame = 0

Query:    8 DIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            DIGTLYL+FG FSGVLGTAMSVLIRLQLA+PGN FLGGN+QLYNVIVTAHAFLM+FFMVMP+LIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVE+GAGTGWTVYPPL
Sbjct:    4 DIGTLYLIFGGFSGVLGTAMSVLIRLQLASPGNQFLGGNHQLYNVIVTAHAFLMIFFMVMPILIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVESGAGTGWTVYPPL 124

[Close]

BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Match: A0A2H4UKK6_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A2H4UKK6_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 8.000e-75
Identity = 109/126 (86.51%), Postives = 120/126 (95.24%), Query Frame = 0

Query:    3 STNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLYNVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPPSLILLLASSLVEAGAGTGWTVYPPL 128
            STNHKDIGTLYL+FG FSGV+GT +S+LIRLQLATPG+ FL GN+QLYNVIVTAHAFLM+FFMVMP+LIGGFGNWFVPLMIGAPDMAFPRMNN+SFWLLPPSL+LLL SS VE+GAGTGWTVYPPL
Sbjct:    1 STNHKDIGTLYLVFGVFSGVIGTTLSILIRLQLATPGSEFLSGNHQLYNVIVTAHAFLMIFFMVMPILIGGFGNWFVPLMIGAPDMAFPRMNNVSFWLLPPSLVLLLGSSFVESGAGTGWTVYPPL 126

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig89.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2Z5XCH3_9PHAE	5.550e-79	92.97	Cytochrome c oxidase subunit 1 (Fragment) n=16 Tax...	[more]
A0A1L6KY02_9PHAE	2.770e-78	96.85	Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum f...	[more]
A0A0U1XAH8_SARHM	7.780e-78	96.06	Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyc...	[more]
A0A0R5B1C0_9PHAE	3.930e-77	90.48	Cytochrome c oxidase subunit 1 (Fragment) n=9 Tax=...	[more]
E6ZES6_ECTSI	6.440e-77	93.75	Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyc...	[more]
A0A0S2I710_SACJA	9.760e-77	92.97	Cytochrome c oxidase subunit 1 n=14 Tax=Saccharina...	[more]
A0A8F0K0Q8_9PHAE	5.850e-76	91.41	Cytochrome c oxidase subunit 1 n=5 Tax=Laminariale...	[more]
A0A0R5AZL4_9PHAE	1.850e-75	89.68	Cytochrome c oxidase subunit 1 (Fragment) n=87 Tax...	[more]
A0A6B9KBI9_ALAES	4.490e-75	93.39	Cytochrome c oxidase subunit 1 (Fragment) n=16 Tax...	[more]
A0A2H4UKK6_9PHAE	8.000e-75	86.51	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 48..71 score: 69.06 coord: 118..128 score: 74.95 coord: 76..100 score: 81.21
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 8..128 e-value: 3.9E-31 score: 108.4
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..128
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..128 e-value: 2.6E-55 score: 189.6
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 2..128
None	No IPR available	PANTHER	PTHR10422:SF39	CYTOCHROME C OXIDASE SUBUNIT 1-RELATED	coord: 1..128
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..128 score: 30.81254

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig89	contig	A-nodosum_M_contig89:209833..210216 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig89.27.1	mRNA_A-nodosum_M_contig89.27.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig89 209833..210216 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig89.27.1 ID=prot_A-nodosum_M_contig89.27.1|Name=mRNA_A-nodosum_M_contig89.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=128bp
IFSTNHKDIGTLYLLFGAFSGVLGTAMSVLIRLQLATPGNMFLGGNYQLY
NVIVTAHAFLMVFFMVMPVLIGGFGNWFVPLMIGAPDMAFPRMNNISFWL
LPPSLILLLASSLVEAGAGTGWTVYPPL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf
IPR023616	Cyt_c_oxase-like_su1_dom