prot_A-nodosum_M_contig887.13.11 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig887.13.11
Unique Nameprot_A-nodosum_M_contig887.13.11
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length553
Homology
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A6H5LDH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDH7_9PHAE)

HSP 1 Score: 696 bits (1797), Expect = 9.950e-247
Identity = 381/570 (66.84%), Postives = 421/570 (73.86%), Query Frame = 0
Query:    1 MVAMMTIKGFPPSLPQAEIKGLLETIGKVEEFACYHEEASLTCRCRYASEEDAAKAKKGFHDLQMGATTLKVDFEESSPQATYGYAPVATGSGNIATETNGSNAGGGQAAVSIGFGSSASTIAEKKPEDPPRRKKSRFAPPPTGAGSLVAGLGVVPAVAASSRLGLPGLDASTVA--GLPPATVSGGLGGLGVPGLGLGAP-----------VQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMPTEGALTTVQNTVNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGNA-----QVAEEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSFA 552
            MVAMMTIKGFP SLP+AEIKGLLETIG+V+ F C  +  SLTC CRY++++D AKAKKGFHDL+MG  TLKVD EE++P             G   T + G+  G G    +   GSS                  RFAPPPTGA  L AGLG  P  A +  LG+PGL    +   GLPPA+V                              TPQMKSQIE+FVGNIPVGTTQQGL+DFLNAAMLK             VGLN+ PGNPVTSCRLNSKFAFCVMR PEEAAKALNLNGIPYLGN+LK+QRPSSYTGPPDRAVTWQVLTGQAEMP EG +  +QN+  KL+CEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPI SIRMNARFAFLEMR++EDAT ALNLDGIPF GAALSVGRPKKYEGPVTPHKTWFDVLAECSFGL+G A       AE    STVVRIGNVVT EELTDD AQ+EVVEDMTEECSKYG+VA IEIPHVGG  AGVGFVFVK+ ++ DA+KAK+GFG+RTFDGKSVDA YFPE++FAAKSFA
Sbjct:    1 MVAMMTIKGFPSSLPEAEIKGLLETIGQVDMFRCSVDGDSLTCTCRYSTDDDTAKAKKGFHDLEMGEMTLKVDVEEAAP-------------GTTDTSSAGNAGGDGSGDKAPAEGSSVEXXXXXXXXXXXXXXXXRFAPPPTGAVDLQAGLGATPGAAGAGLLGIPGLGGGXLGLGGLPPASVHAAXXXXXXXXXXXXXXXXXXXXXXXPAAMTPQMKSQIEIFVGNIPVGTTQQGLVDFLNAAMLK-------------VGLNLQPGNPVTSCRLNSKFAFCVMRNPEEAAKALNLNGIPYLGNVLKMQRPSSYTGPPDRAVTWQVLTGQAEMPAEGMML-MQNSATKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPILSIRMNARFAFLEMRTAEDATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLVGGAGQGGATEAEPAPTSTVVRIGNVVTPEELTDDEAQKEVVEDMTEECSKYGAVAGIEIPHVGGAGAGVGFVFVKFHTLEDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKSFA 543          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: D8LTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD8_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 2.110e-129
Identity = 198/244 (81.15%), Postives = 215/244 (88.11%), Query Frame = 0
Query:  314 QVLTGQAEMPTEGALTTVQNTVNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGNA-----QVAEEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSFA 552
            QVLTGQAEMP EG +  +QN+  KL+CEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPI SIRMNARFAFLEMR++E+AT ALNLDGIPF GAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMG A       AE    STVVRIGNVVT EELTDD AQ+EVVEDMTEECSKYG+VA IEIPHVGG  AGVGFVFVK+ ++ DA+KAK+GFG+RTFDGKSVDA YFPE++FAAKSFA
Sbjct:   16 QVLTGQAEMPAEGMML-MQNSATKLSCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPPNPILSIRMNARFAFLEMRTAEEATAALNLDGIPFGGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGGAGQGGAAEAEPAPTSTVVRIGNVVTPEELTDDEAQKEVVEDMTEECSKYGAVAGIEIPHVGGAGAGVGFVFVKFHTLEDAQKAKKGFGSRTFDGKSVDATYFPEEQFAAKSFA 258          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A7S2V6E6_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E6_9STRA)

HSP 1 Score: 283 bits (724), Expect = 3.860e-85
Identity = 180/423 (42.55%), Postives = 244/423 (57.68%), Query Frame = 0
Query:  132 RRKKSRFAPPPTGAGSLVAGLGVVPAVAASSRLGLPGLDASTV-AGLPPATVSGGLGGLGVPGLGLGAPVQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMPTEGALTTVQNTVNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLC-KPPNPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGNAQVAEEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSFA 552
            R+K S+F+  PTG  +  A LGV       + LG PG  A+ + AGL                     PVQ    K+  ELFVGN P GT++  L++FLNAA+ + +             L   PGNP+  CR+++KFAF  +R+ EE    L+LNGIP++G +LK+ RP+ Y GP  +A TWQ LTGQ + P EGA  +V +   KL  E+++G+   E     LQE+LG A+ QVGL  +  NPI  +R +  FAF+E+RS E+A   LNL+ IPF G  L +GRP KY GP  PH  W DVLA+   G M     A ++ PS V+ + N+VT +EL DD   +E+VED  +EC KYG+V ++EIP  G P  GVG VF+++ S ADA KA      RTF G  VDA+YFPE K+  K  +
Sbjct:  139 RKKTSKFSAAPTGFAAAGA-LGV-------AALGTPGAAANPLLAGLXXXXXXXXXXXXXXXXXXXXMPVQAD--KAFRELFVGNTPPGTSELVLMEFLNAALNQVK-------------LTTAPGNPIIGCRVSNKFAFIELRSAEETNNCLSLNGIPFMGQLLKIGRPTKYCGPVIQASTWQALTGQ-QAP-EGA--SVVDPSTKLYRELYIGSTTAEMTELGLQEFLGTAMQQVGLTLQEGNPIVQVRHSGTFAFVELRSIEEANNCLNLNSIPFMGQFLKIGRPSKYPGPQVPHLNWEDVLAKYMAGEMPTGGGAAQQQPSRVIALSNMVTTDELMDDTTYQEIVEDTRDECGKYGAVQSMEIPRPGAPH-GVGKVFIEFTSTADAAKAIGALKGRTFAGNKVDARYFPESKYQVKDLS 533          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: D8LTD9_ECTSI (RNA-binding region-containing protein (RNP-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD9_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 4.430e-79
Identity = 170/326 (52.15%), Postives = 192/326 (58.90%), Query Frame = 0
Query:    8 KGFPPSLPQAEIKGLLETIGKVEEFACYHEEASLTCRCRYASEEDAAKAKKGFHDLQMGATTLKVDFEESSPQATYGYAPVATGSGNIATETNGSNAGGGQAAVSIGFGSSASTIAEKKPEDPPRRKKSRFAPPPTGAGSLVAGLGVVPAVAASSRLGLPGLDASTVAGLPPATVSGGLGGLGVPGLGLGAP----------VQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMP 323
            +GFP SLP+AEIKGLLETIG+V+ F C  +  SLTC CRY++++D AKAKKGFHDL+MG  TLKVD EE++P             G   T + G+  G G    +   GSS                  RFAPPPTGA  L  GLG  P  A S  LG                                              TPQMKSQIE+FVGNIPVGTTQQGL+DFLNAAMLK             VGLN+ PGNPVTSCRLNSKFAFCVMR PEEAAKALNLNGIPYLGN+LK+QRPSSYTGPPDRAVTWQV  G+  +P
Sbjct: 1634 EGFPSSLPEAEIKGLLETIGQVDIFRCNVDGDSLTCTCRYSTDDDTAKAKKGFHDLEMGEMTLKVDVEEAAP-------------GTTDTSSAGNAGGDGSGDKAPAEGSSVEXXXXXXXXXXXXXXXXRFAPPPTGAVDLQGGLGATPGAAGSGLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPAAMTPQMKSQIEIFVGNIPVGTTQQGLVDFLNAAMLK-------------VGLNLQPGNPVTSCRLNSKFAFCVMRNPEEAAKALNLNGIPYLGNVLKMQRPSSYTGPPDRAVTWQV--GEERVP 1931          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A7S4D6W7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W7_HETAK)

HSP 1 Score: 267 bits (682), Expect = 1.010e-78
Identity = 169/422 (40.05%), Postives = 229/422 (54.27%), Query Frame = 0
Query:  176 GLPPATVS-----GGLGGLGVPG-LGLGAP----------VQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMPTEGALTTVQNTVNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPP-NPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLM----------------------------GNAQVAEEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSFA 552
            G+PPA  +       LGG  VPG   +GAP                K++ ELFVGN P GT++  L++FLNAAM++ +              N+  GNP+ SCR+++KFAF  +RT EEA   LNLNGIP++G  LK+ RP+ Y GP   A TWQ LTGQA      A+     T  K+  +++VGN  PE   P L+E+LG A+ QVGL +   N I  +R++  FAF+E+RS E+A+  +NL+GIPF G  L + RP KY GP  PH  W D+LA+   G +                                 A   TPS V+ + N+VT ++L DD    E++ED  +ECSK+G+V  I IP       GVG VFV Y S  +A+KA      RTF G +V+AKYFPE K+ AK F+
Sbjct:    8 GVPPALQAQFPGLAALGGTAVPGGAAIGAPGAALTAGLAGAAAAADKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQ-------------NIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAPPADPTAVAVDPQT--KIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGLNQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILAKYMAGELKAKPKMPAVAAAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPRPKDGPHGVGLVFVHYSSEEEAKKAIDALSGRTFAGNTVEAKYFPEAKYLAKDFS 414          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A448YVH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVH2_9STRA)

HSP 1 Score: 258 bits (658), Expect = 6.430e-77
Identity = 168/391 (42.97%), Postives = 219/391 (56.01%), Query Frame = 0
Query:  176 GLPPATVSGGLGG-LGVPGLG----LGAPVQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMPTEGALTTVQNTVNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGL-CKPPNPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLM---------GNAQVAEEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSF 551
            GLPP  + GG+     +P L     L       Q K   ELFVGN P GT++  L+ FLN AM              RV L      P+ +CR+NSKFAF  + + E A KALN+NGIP+LG +LK+ RPS Y GP   A TWQ LTGQA +P    L   Q    K+N E+FVGN  PE     L+E+LG A+ QVGL   P NPI S R++ +FAF+E+RS E+A  ALNL+ IPF GA L VGRP K+ GP   H  W DVLA+   G +         G A +      + VV + N++T E+L+ +    E+VED  +EC +YG +  + IP  G P  G   VF++Y S  DA KA +    RTFDG+ V+A +F E KF  K+F
Sbjct:   36 GLPPVGLYGGMSAPRXIPSLSHLPALSNAHLAAQEKINRELFVGNTPPGTSEMLLLQFLNGAMR-------------RVKLCGEQETPILNCRVNSKFAFVELVSAEMANKALNMNGIPFLGAVLKVSRPSKYAGPHVPARTWQQLTGQA-LPAGTVLDAEQE---KINRELFVGNTTPEMTERMLREFLGNAMEQVGLNVMPGNPITSCRVSGKFAFVELRSPEEAANALNLNNIPFMGAQLRVGRPSKWSGPPDSHGNWEDVLAKYMSGELQAGNTAPGQGAAAMNSNVKATRVVELKNMLTXEDLSVEEEYNELVEDTEQECKQYGQLLNVYIPKKGEP--GATKVFLEYASTEDASKAIKSLEGRTFDGQRVEATFFDETKFMNKTF 407          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A6U2QA35_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2QA35_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.620e-75
Identity = 183/446 (41.03%), Postives = 242/446 (54.26%), Query Frame = 0
Query:  131 PRRKKSRFAPP--PTGAGSLVAGLGVVPAVAASSRLGLPGLDASTVAGLPPATVSGGLG------GL--GVPGLGLGAPVQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMPTEGALTTVQNT----VNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPP-NPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMG--------------NAQVAEEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFA 547
            P R  +  AP   P G G  V   GV P V       +PG+   TV  LPP  V+  LG      GL  GVP L + A  Q  + K   ELFVGNIP GT+   L +FLN AM              R GL      P+   R++ KFAFC + + ++A KALNLNGIP++G  L++ RPS YTGP   + TWQ LTGQ   P    + +V         K+N E+FVGN  PE    +L+++LG AL QVGL   P NPI S RM+ +FAF+E+R+ ++A KALNL+ IP+ GA L VGRP K+ G  TPH  W D+LA+   G +                A      T + VV + N++T E+L  D    E++ED  +ECS +GS+  +EIP  G    G G +F++Y S +DA KA  G   RTFDG+ V A YF E+KF+
Sbjct:   84 PARGHTNIAPDVNPVGIGGPVPPPGVTPIV-------MPGMQ-GTVPALPP-NVAPILGTGXXXXGLPPGVPNLLVQAQAQQAE-KINRELFVGNIPPGTSDMLLREFLNGAMR-------------RTGLCAPNATPILQVRVSPKFAFCELVSYDDANKALNLNGIPFMGIALRVSRPSKYTGPYVPSKTWQELTGQ---PLPAGMQSVPANGPPGEEKINRELFVGNTTPEMTEESLKDFLGKALEQVGLVNSPGNPINSCRMSGKFAFIELRTVDEAKKALNLNNIPYMGATLRVGRPSKWTGEHTPHGNWEDILAKYMSGELQLPAQPGHAPPVPAPKAPDVPTATQTKVVALTNMLTKEDLQSDQDYEEILEDTKDECSGFGSLVKVEIPRSG---PGEGKIFLQYVSASDATKAIEGLRGRTFDGRKVAAVYFSEEKFS 500          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A7S2HGX3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGX3_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.500e-74
Identity = 154/367 (41.96%), Postives = 211/367 (57.49%), Query Frame = 0
Query:  200 VQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMPTEGALTTVQNTV---NKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPP-NPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLM-----GNAQVA------EEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSF 551
            V   Q K   ELFVGN P GT++  L+ FLN AM + +             +      P+  CR N KFAF    + +EA  ALNLNGIP++G+ L++ RPS Y GP   + TWQ LTGQA +P  G     +NT    +K+N E+F+GN  PE     L ++LG A+ QVGL   P NPI + R++ +FAF+E+RS E+A  ALNL+ IP+ GA L VGRP KY G  T H  W D+LA+   G +     G A  A      +  +P+ VV + N++T EELT D    E++ED  EECS++GS+  + IP  G    G   +F++Y S  DA KA +G   RTFDG+ V+A ++ E KFA K +
Sbjct:   25 VAAAQDKVNRELFVGNTPPGTSETLLMAFLNGAMRRTK-------------ICAADATPIIQCRTNQKFAFVECASIQEANLALNLNGIPFMGSSLRVSRPSKYAGPHVASKTWQELTGQA-LPA-GLTPVPENTSPAEDKVNRELFIGNTTPEMTEGMLTDFLGKAMEQVGLSNQPGNPITACRVSGKFAFIELRSKEEAANALNLNNIPYLGAQLRVGRPSKYTGVQTSHGNWEDILAKYMSGELKLPSQGGAPAAAATPAEDVGSPTRVVELKNMLTKEELTSDQDYEEIMEDTKEECSQFGSLKNLVIPRDG---PGATKIFLEYLSTDDAAKAIQGLAGRTFDGRKVEAVFYDETKFANKEY 373          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A7S4I336_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I336_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.850e-74
Identity = 171/445 (38.43%), Postives = 241/445 (54.16%), Query Frame = 0
Query:  125 KKPEDPPRRKKSRFAPPPTGAGSLVAGLGVVPAVAASSRLGLPGLDASTVAGLPPATVSGGLGGLGVPGLGLGAPVQTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVGLNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRPSSYTGPPDRAVTWQVLTGQAEMPTE-----GALTTVQNTVNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPP-NPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLM-------GNAQVAEEETP-----STVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSF 551
            K+   P      R APPP   G   AG+  VP   A    G+  +       +P A  +  + GLGVP +   A     Q K   ELFVGN P GT++  LI FL+ AM              R GL    G+P+ +CR+N KFAF    T + A +ALNLNGIP+LG+ LK+ RPS Y GP   + +WQ LTG A +P       GAL    +  +K+N E+F+GN  PE     L ++LG A+ QVGL K P NPI + R + +FAF+E+R++++A  ALNL+ IP+ GA L VGRP KY GP TPH  W D+LA+   G +       G         P     + VV +  ++T ++L +D+  +E++ED TEEC ++GS+  + IP  G    G   +F++Y +  DA +A      RTFDG+ V A Y+ E +FAA+ +
Sbjct:   11 KRSRSPDMGGDGRGAPPPQP-GVPNAGIPAVPMGGAMPGGGMAAMGQV----VPLAGAASAIPGLGVPPIL--AAQNAAQDKVNRELFVGNTPPGTSEMLLIQFLSGAMR-------------RTGLCKPSGSPIVTCRVNQKFAFVECATVDCANRALNLNGIPFLGSCLKVSRPSKYAGPFVPSKSWQELTGTA-LPNGLAGAGGAL--AGSAEDKINRELFIGNTTPEMTEQMLSDFLGKAMEQVGLSKAPGNPIVTCRTSGKFAFIELRTTDEAASALNLNNIPYLGAQLRVGRPSKYTGPETPHGNWEDILAKYMSGELQLPSKDGGGGAAPAPAAPHAIDATCVVELCQMLTQQDLENDDEYKEILEDTTEECGQFGSLKRVVIPRSG---PGATKIFLEYATKEDAARAIASLAGRTFDGRKVTAVYYDEARFAAQDY 429          
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Match: A0A835ZNU8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNU8_9STRA)

HSP 1 Score: 244 bits (623), Expect = 6.430e-74
Identity = 134/245 (54.69%), Postives = 170/245 (69.39%), Query Frame = 0
Query:  312 TWQVLTGQAE--MPTEGALTTVQNTVNKLNCEVFVGNIPPETQAPTLQEYLGGALVQVGLCKPP-NPIASIRMNARFAFLEMRSSEDATKALNLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGNA--QVAEEETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVGGPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKSF 551
            TWQ+LTGQA   + T  A T + +   K N E+FVGN+P E QA  LQ++LG A+ QVGL   P NPI  +RMNARF+FLE RS E+AT AL L+ IPF  + L+  RP KY GPVTP K+WF+ LA+ +  ++GN   Q A    PSTVVRIG+VV A+EL DD + +EV+EDM EECS+YG+V  IEIP     AAGVG+VFV+Y ++ +A KA+  F +RTFDGK VDA +F  D FAAK F
Sbjct:    4 TWQILTGQAPETIATVAAATALVDPNTKTNREIFVGNVPLEAQADALQQFLGSAMQQVGLTTAPGNPIVHVRMNARFSFLEFRSMEEATHALFLNNIPFGSSTLTFARPSKYAGPVTPTKSWFETLADSN--VLGNVMEQQAAGPPPSTVVRIGSVVNADELVDDESYQEVIEDMREECSRYGTVLGIEIPR--NAAAGVGYVFVQYSTVEEATKARNAFSSRTFDGKQVDATFFGHDDFAAKRF 244          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig887.13.11 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDH7_9PHAE9.950e-24766.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTD8_ECTSI2.110e-12981.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V6E6_9STRA3.860e-8542.55Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
D8LTD9_ECTSI4.430e-7952.15RNA-binding region-containing protein (RNP-1) n=1 ... [more]
A0A7S4D6W7_HETAK1.010e-7840.05Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A448YVH2_9STRA6.430e-7742.97Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6U2QA35_9STRA3.620e-7541.03Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2HGX3_9STRA1.500e-7441.96Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4I336_9STRA2.850e-7438.43Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A835ZNU8_9STRA6.430e-7454.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 341..415
e-value: 5.8E-6
score: 35.8
coord: 4..73
e-value: 0.075
score: 16.6
coord: 210..298
e-value: 2.8E-5
score: 33.5
coord: 456..539
e-value: 0.011
score: 23.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 7..69
e-value: 1.2E-4
score: 21.8
coord: 480..535
e-value: 1.2E-4
score: 21.8
coord: 342..411
e-value: 1.2E-4
score: 21.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 340..419
score: 11.008294
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 209..302
score: 8.876369
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 455..543
score: 9.882637
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 450..552
e-value: 1.4E-24
score: 88.1
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..83
e-value: 3.1E-6
score: 28.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 205..321
e-value: 1.7E-15
score: 59.0
coord: 339..431
e-value: 1.6E-15
score: 59.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..142
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF 65 KDA SUBUNITcoord: 141..327
coord: 339..424
coord: 446..547
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 6..81
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 141..327
coord: 446..547
coord: 339..424
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF 65 KDA SUBUNITcoord: 6..81
NoneNo IPR availableCDDcd12232RRM3_U2AF65coord: 454..538
e-value: 4.87334E-30
score: 111.109
NoneNo IPR availableCDDcd00590RRM_SFcoord: 7..73
e-value: 2.09247E-5
score: 40.7513
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 339..543
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 211..304
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 7..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig887contigA-nodosum_M_contig887:180414..199767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig887.13.11mRNA_A-nodosum_M_contig887.13.11Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig887 180414..200881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig887.13.11 ID=prot_A-nodosum_M_contig887.13.11|Name=mRNA_A-nodosum_M_contig887.13.11|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=553bp
MVAMMTIKGFPPSLPQAEIKGLLETIGKVEEFACYHEEASLTCRCRYASE
EDAAKAKKGFHDLQMGATTLKVDFEESSPQATYGYAPVATGSGNIATETN
GSNAGGGQAAVSIGFGSSASTIAEKKPEDPPRRKKSRFAPPPTGAGSLVA
GLGVVPAVAASSRLGLPGLDASTVAGLPPATVSGGLGGLGVPGLGLGAPV
QTPQMKSQIELFVGNIPVGTTQQGLIDFLNAAMLKARASFTPLPPFFRVG
LNMTPGNPVTSCRLNSKFAFCVMRTPEEAAKALNLNGIPYLGNMLKLQRP
SSYTGPPDRAVTWQVLTGQAEMPTEGALTTVQNTVNKLNCEVFVGNIPPE
TQAPTLQEYLGGALVQVGLCKPPNPIASIRMNARFAFLEMRSSEDATKAL
NLDGIPFAGAALSVGRPKKYEGPVTPHKTWFDVLAECSFGLMGNAQVAEE
ETPSTVVRIGNVVTAEELTDDNAQREVVEDMTEECSKYGSVAAIEIPHVG
GPAAGVGFVFVKYGSIADAEKAKRGFGARTFDGKSVDAKYFPEDKFAAKS
FA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf