prot_A-nodosum_M_contig887.10.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig887.10.4
Unique Nameprot_A-nodosum_M_contig887.10.4
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length443
Homology
BLAST of mRNA_A-nodosum_M_contig887.10.4 vs. uniprot
Match: D8LTE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE0_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.510e-29
Identity = 121/264 (45.83%), Postives = 143/264 (54.17%), Query Frame = 0
Query:    9 MRSTGALLGFLLASAQAFYAPPAQT---FKSKPS-FMGQPCV----RRGTASRTTLRASLEDIERKLIEQXXXXXXXXXXXXXXXXEVSIPFPAPDLKDVVPAPKVPAPVSKALPSVFKPKSAPAKIEEALKAVVPAPPPVPTPPSVDGIGKDDLAKGVALGALPWVIAPVAAFAALRPVLQKAAAVREEERKQKELEAAEKAKAAARAERMEGLTRDEEGRVKILAGVAALSLGGLLVQPLFAPEDLT----KPIPTVQTQKA 260
            MRS   LLGFLLASAQAFY P A+T     S+PS F+GQ          +A R  L ASLEDIE+KLI       XXXXXXXXXXX                                          +                S   +   ++A+GVALGALPWV+APV A AALRPV+ K  A R+ E+K K +E A+ A+AAARA +MEGLT  +EG VK L+ VAA+ LGGLLVQPLFAP DL     KP PTVQT+KA
Sbjct:    1 MRSAVVLLGFLLASAQAFYIP-ARTRPALNSQPSSFLGQTAAVAPRAAPSARRAILVASLEDIEKKLIADEKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKK---------------SSSAVATGEVAEGVALGALPWVVAPVVALAALRPVISKGVAARDAEQKAKAIEEAKAAEAAARAAKMEGLTASDEGAVKALSAVAAVCLGGLLVQPLFAPPDLASLPAKPTPTVQTKKA 248          
BLAST of mRNA_A-nodosum_M_contig887.10.4 vs. uniprot
Match: A0A7S2WWV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWV3_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.920e-5
Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  141 VPTPPSVDGIGKDDLAKGVALGALPWVIAPVAAFAALRPVLQKAAAVREEERKQKELEAAEKAKAAARAERMEGLTRDEEGRVKILAGVAALSLGGLLVQ 240
            +P+PPS  GI K+  A GV LGA P+V+AP+AA AA+RP LQK A  R E +++K  E A K     +    EG    E+ R   +       +GGLL+Q
Sbjct:    7 IPSPPSA-GISKE--AAGVGLGAAPFVVAPLAALAAVRPYLQKTAEARAEAQRKKAEEEARKKSRLTKFSLPEG----EQQRFIAVVAAGVAGIGGLLLQ 99          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig887.10.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTE0_ECTSI2.510e-2945.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2WWV3_9STRA2.920e-542.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..212
NoneNo IPR availableCOILSCoilCoilcoord: 53..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig887contigA-nodosum_M_contig887:159709..163418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig887.10.4mRNA_A-nodosum_M_contig887.10.4Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig887 158204..163613 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig887.10.4 ID=prot_A-nodosum_M_contig887.10.4|Name=mRNA_A-nodosum_M_contig887.10.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=443bp
MKYRAGRNMRSTGALLGFLLASAQAFYAPPAQTFKSKPSFMGQPCVRRGT
ASRTTLRASLEDIERKLIEQEKKVVSAAKDLESAAKEVSIPFPAPDLKDV
VPAPKVPAPVSKALPSVFKPKSAPAKIEEALKAVVPAPPPVPTPPSVDGI
GKDDLAKGVALGALPWVIAPVAAFAALRPVLQKAAAVREEERKQKELEAA
EKAKAAARAERMEGLTRDEEGRVKILAGVAALSLGGLLVQPLFAPEDLTK
PIPTVQTQKAPTPAPAPKKEPAPAAKAEPSPAPALATKPEPKPEPASLPA
LPPAPKLETALTSKPEPKSEPAPALKPEPKSVSAPVPMPEPKSEPTSVSD
PPPAPKLEPAPTSKPGTEPEPVPVPKNEPKPEPSPAPAPTPAPKPKAKAK
SAPAPAPAPAPAYSGPSGGRVLEAETVNSNVLSGLKSYKTKK*
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