prot_A-nodosum_M_contig8863.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8863.1.1
Unique Nameprot_A-nodosum_M_contig8863.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length367
Homology
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: D8LGK8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 1.850e-116
Identity = 205/408 (50.25%), Postives = 252/408 (61.76%), Query Frame = 0
Query:    1 MLEGFQSMIEGERLDGLLDALVSSSGHPALENACLLVMCGVVCLPQAHCVITKRKDVQKALFGAVADRRPLRINP--GYEEEGICVCPAVGAAICLNSLLVSCGGLSKETAKIWVEVGGLSAITSAVESHSVFVGGGDDDVLPAMLFGLSMPLLLYMK-----------------------------------------------EDEKHELATTTDAGAEKTSRAAREHLVEVFLRLLVERREWVARSLRIAANTSRSDV--------VPVTINNILVNSLAHEELLGPYVGTTPVRLRAQAVKASRTLETEGRFAPGFAEKFARLLGLGGQQVRKPRVATGPVGTIKGDKCSRLS------CGKREANA--GKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCRK 343
            MLEGF  ++EG RL+ LL+ALV+S GHPAL+++CL+V+CGV  L QAH  IT+R+DV +AL  A+A     +I+P     E+ + + P+VG+AICLNSLLVSCGGL ++T  +W E+  LSAITSA+ESHSVF GGGD+DVLPAMLFGL+ PLL   +                                               ED         DA  +K SRAAR+ L E FLRLL ERREWVARSL +AAN S +D+         PVTINN+LVNSLAH +LLG +   TPVRLRAQAV A+R  ET+G FAPGF  + ARLLGLGGQQ    R+A   V  IK  + +R +      CGKR+ NA  G KFKVCSRCQ A YCS  CQ AHWK  H+  CR+
Sbjct:   68 MLEGFTQLVEGSRLNDLLNALVASEGHPALQHSCLMVLCGVASLQQAHVAITERRDVLQALLKALASPTAHQISPEGSVGEDDLQINPSVGSAICLNSLLVSCGGLGEDTINVWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDATAGAGAVVDAETDKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGATAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIKNKEAARAANIKCAMCGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKT-HKMECRR 474          
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.400e-22
Identity = 110/376 (29.26%), Postives = 156/376 (41.49%), Query Frame = 0
Query:    5 FQSMIEGERLDGLLDALVSSSG--HPALENACLLVMCGVVCLPQAHCVITKRKDVQKALFGAVADRRPLRINPGYEEEG--ICVCPAVGAAICLNSLLVSCGGLSKETAKIWVEVGGLSAITSAVESHSVFVGGGDDDVLPAMLFGLSMPLLLYMKEDEKHELATTTDAGA-EKTSRAAREHLVEVFLRLLVERREWVARSLRIAANTSRSDVVPVTINNILVNSLAHEELLGPYVGTTPVRLRAQAVKASRTLETEGR------FAPGFAEKFARLL--------GLGGQQVRKPRVATGPVGTIKGDKCSRLS-CGKREAN--------------AGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCRKMAS 346
            F+ ++ G RLD LL+    S    HPAL+ ACL+ + GV  L      +  R DV K L   +A  R   + P     G    V  A GA   +  L  S G L    AK+WVE+G +SA+ S +E+H+VF     D   P       +PL  ++       +AT+  AGA +  S   +  L + +L + +E   W+A                    ++L +       L   V   P +LRA AV A+R  E EG       +  G A++ A  L          GG+ V   R   GP       +C R+  CG    N              A   FK CS+C +  YCS  CQ A WK+ HR+ C  + S
Sbjct:   74 FRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVF-----DRSNPV---SGDLPLCFFL-------IATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAA----------------DLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGGELVG--RRCAGP-------RCDRVQKCGHGGGNPHPAASEDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKACSAVNS 408          
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: A0A6A6P7W4_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P7W4_9PEZI)

HSP 1 Score: 61.6 bits (148), Expect = 1.370e-6
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 0
Query:  289 GTIKGDKCSRLSCGKREANAGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCRK 343
            G + G KC+  SCG+ ++  G+    CSRC +  YCS+ CQ  HWK+ H+ MC+K
Sbjct: 1168 GDVGGGKCA--SCGETKSKTGRNLLRCSRCHTVQYCSQKCQRTHWKQAHKNMCKK 1220          
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: A0A1Y1HYU8_KLENI (MYND-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYU8_KLENI)

HSP 1 Score: 60.8 bits (146), Expect = 1.750e-6
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  295 KCSRLSCGKREANAGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCR 342
            KCS  SC   E+ A ++FK+CS C+ A YCS++CQ A WKEGH+  CR
Sbjct:  463 KCSHSSCSLIES-ASRRFKICSGCRLAVYCSQDCQKAAWKEGHKSRCR 509          
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: A0A7S0SDP7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SDP7_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.950e-6
Identity = 28/53 (52.83%), Postives = 33/53 (62.26%), Query Frame = 0
Query:  296 CSRLSCGKREANAGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCRKMASSS 348
            C R  CGK E  AGK FK CSRC +A YCS  C  A WKE H+  C K+++ S
Sbjct:  571 CCRRGCGKTETEAGK-FKKCSRCNAARYCSPECGVAGWKEDHKYNCTKLSTPS 622          
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: A0A383W6P6_TETOB (MYND-type domain-containing protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W6P6_TETOB)

HSP 1 Score: 57.0 bits (136), Expect = 8.270e-6
Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0
Query:  299 LSCGKREANAGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCRKMASSSLGARV 353
            L CG+ E   G +   C  C++A+YC + CQ AHW+ GH+ +CR     S  A+V
Sbjct:   39 LECGEEEEADGTQLLRCGNCKTAYYCRKACQKAHWRAGHKAVCRPPGEGSTEAQV 93          
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: A0A1Y1HX02_KLENI (MYND-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HX02_KLENI)

HSP 1 Score: 57.0 bits (136), Expect = 8.570e-6
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  295 KCSRLSCGKREANAGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCR 342
            KCS  SC + E+ A ++FKVCS C+ A YCS++CQ A WK GH+  CR
Sbjct:  168 KCSHSSCSEMES-ASRRFKVCSGCKLAIYCSQDCQKAAWK-GHKSRCR 213          
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Match: A0A7S2JTV1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTV1_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.110e-5
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0
Query:  299 LSCGKREANAGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCR 342
            ++CGK E   GKK   CS C+SA YCS+ CQ  HWKE H+  CR
Sbjct:  233 MNCGKFEHKNGKKHNRCSACESALYCSKECQKLHWKE-HKADCR 275          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8863.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LGK8_ECTSI1.850e-11650.25MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JNJ8_9PHAE3.400e-2229.26MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6A6P7W4_9PEZI1.370e-643.64MYND-type zinc finger protein samB n=1 Tax=Lineola... [more]
A0A1Y1HYU8_KLENI1.750e-654.17MYND-type domain-containing protein n=1 Tax=Klebso... [more]
A0A7S0SDP7_9CHLO1.950e-652.83Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A383W6P6_TETOB8.270e-640.00MYND-type domain-containing protein (Fragment) n=1... [more]
A0A1Y1HX02_KLENI8.570e-654.17MYND-type domain-containing protein n=1 Tax=Klebso... [more]
A0A7S2JTV1_9STRA5.110e-554.55Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 300..341
e-value: 2.2E-9
score: 37.2
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 298..341
score: 11.187847
NoneNo IPR availableGENE3D6.10.140.2220coord: 296..348
e-value: 1.1E-10
score: 43.1
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 310..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8863contigA-nodosum_M_contig8863:13070..20396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8863.1.1mRNA_A-nodosum_M_contig8863.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8863 12572..20565 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8863.1.1 ID=prot_A-nodosum_M_contig8863.1.1|Name=mRNA_A-nodosum_M_contig8863.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=367bp
MLEGFQSMIEGERLDGLLDALVSSSGHPALENACLLVMCGVVCLPQAHCV
ITKRKDVQKALFGAVADRRPLRINPGYEEEGICVCPAVGAAICLNSLLVS
CGGLSKETAKIWVEVGGLSAITSAVESHSVFVGGGDDDVLPAMLFGLSMP
LLLYMKEDEKHELATTTDAGAEKTSRAAREHLVEVFLRLLVERREWVARS
LRIAANTSRSDVVPVTINNILVNSLAHEELLGPYVGTTPVRLRAQAVKAS
RTLETEGRFAPGFAEKFARLLGLGGQQVRKPRVATGPVGTIKGDKCSRLS
CGKREANAGKKFKVCSRCQSAFYCSENCQGAHWKEGHREMCRKMASSSLG
ARVPSARCSVEQGSLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND