prot_A-nodosum_M_contig886.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig886.18.1
Unique Nameprot_A-nodosum_M_contig886.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length384
Homology
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: D7FSW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSW0_ECTSI)

HSP 1 Score: 513 bits (1320), Expect = 8.660e-179
Identity = 268/404 (66.34%), Postives = 305/404 (75.50%), Query Frame = 0
Query:    4 EVRRSREIFSCFDDKRRHRRLIGHQSRTFDFQFHPVEQVAISASEDGTGRVWDLSTGKCGKVLAANSREQEVLRACWAPPGEA---CVAATGSADGIVRLWGIA-GGSNDGPAGVERYRALKVVGSLHHRNEAKGLDGQVYSCQFVPEHAAGG--ATAGATRLLTASDQSVHLWDVETCKRVASRALSKVGDHSIGGERNPSDLSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRSKPSVLRG-RSTAQTGLAWSDDGTILASCGGDGAVTVWDARTWRIRSTLCGHSRPVYGVVFYPSEGG--------------ESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIYSCSVSADGRRLAVAGGGPGK--AGFLGVPVKLVDLS 384
            E R+S  + +CF+DKR HRRLIGH++RTFDFQFHP E  AISASEDGT RVWDLS+GKC K L  ++++ EVLRACWAPPG A      ATGSADGIVRLWGI  G   D  +GV+RY++LKVVG L HRNEAKGLDGQVYSC F+P+ + G   ++A A  LLTASD SVHLWDVET KRV+SRALSKVG HSIGGERNP DL+FVFDAKPRP +GS VLAVALSDGTVRVGDVL+   K +VLRG   T  T LAWSDDGT+LASCGG+G +TVWD RTW  RS L GHSRPVYG  FY   G                 ++   QLLLSWSSDET+C WD  RA  + TA PLAT+SVE GFP+YSCSVSADGRR A+AGGG  +  AGFLGVP+KLVDLS
Sbjct:    7 EERKSVALAACFNDKRCHRRLIGHRARTFDFQFHPTEDAAISASEDGTARVWDLSSGKCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGRDEKSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSSAAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKAAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFYSCAGNGXXXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATA-PLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLS 409          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A7S2CQ19_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQ19_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.290e-42
Identity = 113/276 (40.94%), Postives = 143/276 (51.81%), Query Frame = 0
Query:  132 AKGLDGQVYSCQFVPEHAAGGATAGATRLLTASDQSVHLWDVETCKRVASRALSKVGDHSI----------GGERNPSDLSFVFDAKPRPRAGSDV---LAVALSDGTVRVGDVLR-GRSKPSVLRGRSTAQ----TGLAWSDDGTILASCGGDGAVTVWDARTWRIRSTLCG-HSRPVYGVVFYPSEGGESEEASTQLLLSWSSDETICMWDASRA----PDNGTALPLATISVEPGFPIYSCSVSADGRRLAVAGG-GPGKAGFLGVPVKLVDL 383
            A G D QVYSC F+PE          + L+TA++ +V  WD+    RV S +       S           G +RNP++ +FVFD +  P A   V    A ALSDGT RV   L  G   P+ +   S       + + WS DG  LA+  GDG++ VWD+RTW+ R+ L G HSRP YG VF+P +          LLLSWSSD TI +WD+ R     P +    P    S  P +PI  C+ S DGR L VAGG G G   FLGVPV LVDL
Sbjct:    8 AHGKDAQVYSCGFIPE---------TSFLITAAESTVRCWDL----RVGSSSEEPTSAWSYDSIGRTTPYGGAQRNPNNENFVFDIRVSPPATGGVNRLFAAALSDGTARVSAGLHAGGVSPTSVADLSLNDGVMLSAIEWSPDGRSLAASRGDGSLLVWDSRTWKCRAVLAGAHSRPCYGSVFHPHDPA--------LLLSWSSDGTIALWDSLRTERPEPIHYGLTPHQADS--PSYPILRCAWSPDGRSLVVAGGDGSGSMSFLGVPVWLVDL 260          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A7S4E2U9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2U9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.410e-34
Identity = 120/374 (32.09%), Postives = 170/374 (45.45%), Query Frame = 0
Query:   22 RRLIGHQSRTFDFQFHPVEQVAISASEDGTGRVWDLSTGKCGKVLAANSREQEVLRACWAPP-----GEACVAATGSADGIVRLWGIAGGSNDGPAGVERYRALKVVGSLHHRNEAKGLDGQVYSCQFVPEHAAGGATAGATRLLTASDQSVHLWDVETCKRVASRALSKVGDHSIGGERNPSDLSFVFDAKPRPRAGSDVL----AVALSDGTVRVGDVLRGRSKPSVLRGRSTAQ-TGLAWSDDGTILASCGGDGAVTVWDARTWRIRSTLCG-HSRPVYGVVFYPSEGGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIYSCSVSADGRRLAVAGGGPGKAGFLGVPVKLVDLS 384
            R   GH  R FD      + + ++ASEDGT +VW L+ G+    +A +  + EVLR  WAPP       A + A   ADG   LW             + + A K +  L H  +      QVY C +    +A G   GA  LLTA+  +V  WDV   K +   +           +    D ++VFD +P PR   D L    A A+SDGT RV DV R      VLR    ++ T + W   GT +ASC GDG   VWDARTW++   L G H+ P YG     ++G  +  A+  L   WS ++ +   DA++      A    T +     P++ C+ S+    + V GG  GK   +   V + DLS
Sbjct:   14 REFAGHTGRVFDVDLGQ-DGLCVTASEDGTAKVWRLADGRLEGEVAQSQTKDEVLRVAWAPPIVRDAAGASLLAVAGADGFCNLWR-----------GDDWSAPKSLQRLDHGGD------QVYGCAW----SACGDAYGAW-LLTAAGAAVRTWDVNAGKSIKQWSY----------QEPRGDQAYVFDVQPAPRDADDALRATIACAVSDGTARVRDV-RLDYDARVLRAPGDSKVTAVGWLG-GTAVASCYGDGCCRVWDARTWKLLGRLKGAHASPCYGAA--KTDGFVASWAAEGLAF-WSCEDALRKADATKK-----ATAPITDAAGNAVPLFQCAFSSS--NIVVCGGAGGKGDAIVPSVFVYDLS 342          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A7S1DA97_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA97_CYCTE)

HSP 1 Score: 97.1 bits (240), Expect = 3.990e-19
Identity = 92/294 (31.29%), Postives = 132/294 (44.90%), Query Frame = 0
Query:  160 LLTASDQSVHLWDVE----------------------------TCKRVASRAL-----------SKVGDHSIG--GERNPSDLSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRS---KPSVLRGRSTAQTGLAWSDDGTILASCGGDGAVTVW--DARTWRIRSTLC---------GHS--RPVYGVVFYPSEGGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLAT-ISVEPGFPIYSCSVSADGR-----------RLAVAGGGPGKAGFLGVPVKLVDLS 384
            L+T+SD  +HLW+++                            T  R+  + L           S  GD  +G  GERNP +L FVFDA   P +G  +L  ALSDG+VR+   + GR        L G  +  T  +W   GT LASC   G + +W  D   +  R ++          GH   RP++G  +    GG+ EE    LL+SW  D  +C+WD SR+  N  A PL T ++    +PIY+  +   G            R+AV GG  G  GFLG+P+ L D++
Sbjct:   14 LMTSSDDFLHLWEIDEPSTEESWELTEVMSIRFTPMETFGYGVTVCRITGKGLDIPGGWSSSRASPGGDGGVGYGGERNPDNLVFVFDASYCPSSG--LLGAALSDGSVRL---MNGRGVCVSILTLPGCQSHMTSFSWDSSGTRLASCVATGHLILWEIDLAGYSYRGSVTPACMAVLEGGHQVGRPLFGAQYC---GGKEEE----LLVSWGIDGRLCLWD-SRSQGNIGA-PLNTLVAKNDDYPIYAIDMFHGGXXXXXXXXXEVSRMAVGGGREG--GFLGIPLYLYDIT 291          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A7S4AKL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKL3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.760e-18
Identity = 88/294 (29.93%), Postives = 122/294 (41.50%), Query Frame = 0
Query:  160 LLTASDQSVHLWDVET----------------------CKRVASRALSKVGDHS-------------------------------IGGERNPSDLSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRS---KPSVLRGRSTAQTGLAWSDDGTILASCGGDGAVTVW-------DARTWRIRSTLC-----GHS--RPVYGVVFYPSEGGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIYSCSVSADGRRLAVAGGGPGKAGFLGVPVKLVDL 383
            L+T+SD+ +HLW++E                        K V S     + DHS                                GGERNPS+  FVFDA   P  GS +L VALSDG++R+   + GR        L G  +  T   W   G  LA+C G G +  W       D   +   +T       GH   RP++G  F    GGE E     LL+SW  D  +C+W  S+A  N    P+A +  +  +PI++  +S   R L V GG  G  GF+GVP+    +
Sbjct:  393 LMTSSDEFIHLWEIERHPLDQQLSLDGQKIHLLQEKIKLKEVLSLYFGPLDDHSYGVTACSITGEGLDLPAPPTKSSEAKDGSVAFGGERNPSNTIFVFDAAYSP--GSGLLGVALSDGSLRL---VNGRGYCISVIQLPGSKSHLTSFCWDATGNRLATCVGTGHLITWSLDPESHDKGNYHTAATCTAIFEGGHQSGRPLFGSRFC---GGEDEN----LLISWGIDGKLCLWH-SKASGN-IYDPVAILKDDGSYPIFAVEISRSERNLVVGGGSEG--GFIGVPLHFYSI 670          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A7S1SXB2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SXB2_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 1.720e-17
Identity = 77/241 (31.95%), Postives = 121/241 (50.21%), Query Frame = 0
Query:  133 KGLDGQVYSCQFVPEHAAGGATAGATRLLTASDQSVHLWDVETCKRVASRALSKVGDHSI--GGERNPSDLS--FVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRSKP-SVLRGRSTAQTGLAWSDDGTILASCGGDGAVTVWDARTWRIRSTLCGHSRPVYGVVFYP--SEGGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIYSCSVSADGRRLAVAGG 366
            KG   +VY+C+ +       A+AG  +LLTAS +S+ +WD+E+ + +      K  D +   GG   P D +  +VF A  R  AGS +LA   SDG +R+ +   G +KP S L+  S+  T +A++  G +LAS  GDG++ V D R W +     G++ P+    F P  ++G E   AS Q       D  +  +D ++        P A+ ++  G  +     S DG+RLA  GG
Sbjct:   19 KGHPEEVYACEVL-------ASAGGKQLLTASAESLFVWDIESGRLLNETRHGKQQDMAAIAGGPPLPPDPTRGYVFGA--REAAGSGLLAAPCSDGVLRLWEASSGAAKPLSALKLHSSVGTSVAFNAAGHLLASASGDGSLVVVDLRMWGVVMRYQGNT-PLMSACFLPPCADGRECVVASGQ-------DGNLWGFDLAQGGSLQQLTPYASPALG-GCAMLCVDASRDGQRLACGGG 241          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A7S2URD4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URD4_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.290e-13
Identity = 66/214 (30.84%), Postives = 101/214 (47.20%), Query Frame = 0
Query:  192 IGGERNPSDLSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRSKPSVLRGRSTAQTGLAWSDDGTILASCGGDGAVTVWDARTWRIRSTLC------GH--SRPVYGVVFYPSEGGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIYSCSVSA-------------DGRRLAVAGGGPGKAGFLGVPVKLVDLS 384
             GG+RNP ++ +VFDA       + ++ VALSDG++R+ +          L G  +  T  +W   GT LASC     + +WD       +  C      GH   RP++G  +    GG+S E    LL++W  D  +C+W++  +    +  P+A +     +PIY+   SA              G RLAV GG  G  GFLG+P  L D++
Sbjct:   41 FGGDRNPENIRYVFDASHC--MANQLIGVALSDGSLRLVNSQGICVSILQLPGVESHLTSFSWDRTGTRLASCVATSHLILWDIDIRSQVNPSCVAVLEGGHVPGRPLFGAAY---TGGKSNE---DLLVTWGVDGRLCVWNSWCSGQIHS--PIAILVDCSDYPIYAVDTSALDQTQESETSELFTGVRLAVGGGREG--GFLGIPAHLYDVT 242          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A7S1ZZE4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZE4_TRICV)

HSP 1 Score: 78.6 bits (192), Expect = 2.230e-12
Identity = 88/290 (30.34%), Postives = 117/290 (40.34%), Query Frame = 0
Query:  138 QVYSCQFVPE-------HAAGGATAGATRLLTASDQSVHLW--------------------------------------------DVETCKRVASRALSKVGDHS--------IGGERNPSDLSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRSK-PSVLR--GRSTAQTGLAWSDDGTILASCGGDGAVTVW-----DARTWRIRSTLC----GHS--RPVYGVVFYPSEGGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIYSCSV 354
            QVY+  FV +       H AG A  G   LLT+SD  VHLW                                             V+       R+ S+  D S         GG+RNP +L FVFDA   P  G  +L  ALSDGT+R+   + GR    S+L+  G     T LAW + GT LAS      V +W     D R W           GH   RPV+G  +    GG +++    LLLSW  D  +C+WDA       +  PL+ +  +  FP+Y+  V
Sbjct:   92 QVYALAFVEDWCGPGNPHQAG-AGMGEDLLLTSSDDYVHLWRPTMGGGGENVLRDAEGGGAKMRLDRRMALRFGHMHEANWGVSAQVDGASWPKKRSRSRDDDSSGAQQQPRAFGGDRNPDNLVFVFDASFCPSNG--LLGAALSDGTLRL---VNGRGVCVSLLQLPGCRAHITSLAWDETGTRLASTIATSHVILWTVDGGDGRGWPRSGCAAVLEGGHDYGRPVFGAKYC---GGPNQD----LLLSWGVDGKMCVWDARSTGQIRS--PLSILVSDGSFPLYAVDV 366          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A086H0W7_STRSC (Uncharacterized protein n=1 Tax=Streptomyces scabiei TaxID=1930 RepID=A0A086H0W7_STRSC)

HSP 1 Score: 67.0 bits (162), Expect = 2.470e-8
Identity = 68/238 (28.57%), Postives = 101/238 (42.44%), Query Frame = 0
Query:  133 KGLDG---QVYSCQFVPEHAAGGATAGATRLLTASDQSVHLWDVETCKRVASRALSKVGDHSIGGERNPSD---LSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRSKPSVLRGRSTAQTGLAWSDDGTILASCGGDGAVTVWDARTWRIRSTLCGHSRPVYGVVFYPSEGGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIYSCSVSADGRRLAVA 364
            +G DG   +V++  + P+   G   A A     + D+ V LWD E+ KR+ +  +        G E +  D   L+F  D +     G D LA   SD            ++P       +A + +A+S DGT+LA+ G    V +W  R    R +L GH   V G+ F   +         + LLS S+D T  +WD +R       LP A      G P +S S   DGR L  +
Sbjct:  184 RGSDGPGTRVWAVAYSPD---GELLATAGLAHASPDREVRLWDAESYKRLGACRIE-------GWELDFIDVLALTFAPDGRSLAAVGHDQLAAVWSDLRTTPSGASCQTARPLASPVVGSAMSSVAFSGDGTLLATAGEALQVRLWSVRYKNPRISLAGHRDLVRGITFTNRD---------RTLLSTSADGTTAVWDLTRG-----FLPGAD-----GSPQHSVSWLPDGRTLVAS 392          
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Match: A0A6P8ZUM7_THRPL (probable E3 ubiquitin-protein ligase HERC1 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZUM7_THRPL)

HSP 1 Score: 67.4 bits (163), Expect = 2.630e-8
Identity = 68/282 (24.11%), Postives = 105/282 (37.23%), Query Frame = 0
Query:   24 LIGHQSRTFDFQFHPVEQVAISASEDGTGRVWD----------LSTGKCGKVLAANSREQEVLRACWAPPGEACVAATGSADGIVRLWGIAGGSNDGPAGVERYRALKV---VGSLHHRNEAKGLDGQVYSCQFVPEHAAGGATAGATRLLTASDQSVHLWDVETCKRVASRALSKVGDHSIGGERNPSDLSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRSKPSVLRGRSTAQTGLAWSDDGTILASCGGDGAVTVWDA--RTWRIRSTLCGHSRP 290
            L GH +R     +H       +++ DGT R+W           L   K   V  +    +E+ + CW+P G    A  G+   I  L  + G + + P   E +  L     + +L    E   L      C+ +      G   G+  L+    Q     ++  C                        L + +      +      A+A SDGTV+ G  +      SV+  +S A +G+ WS DG +LA+CG DGA  VW    +TW      C HS P
Sbjct: 3249 LQGHDNRVNKVLWHENRSQLATSAWDGTIRIWSAPPLCALEHTLVYRKTQNVFGSELHGEEIGQLCWSPTGRFLAACMGNTINIWALPPLPGDNEEAPW-TENFLVLSHSAWITALSWPEEHSALGSPDNKCERLLI----GRVDGSVALVELDSQKQDCVELPNCS-----------------------LPYAYVTHIAWQNEDKEFAIAFSDGTVKFGGYMPNHPTSSVMAHQS-ALSGMKWSPDGRLLATCGTDGACRVWHLVDKTW-----CCLHSLP 3496          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig886.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FSW0_ECTSI8.660e-17966.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2CQ19_9STRA1.290e-4240.94Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4E2U9_9STRA5.410e-3432.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1DA97_CYCTE3.990e-1931.29Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4AKL3_9STRA3.760e-1829.93Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1SXB2_9CHLO1.720e-1731.95Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7S2URD4_9STRA1.290e-1330.84Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1ZZE4_TRICV2.230e-1230.34Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A086H0W7_STRSC2.470e-828.57Uncharacterized protein n=1 Tax=Streptomyces scabi... [more]
A0A6P8ZUM7_THRPL2.630e-824.11probable E3 ubiquitin-protein ligase HERC1 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 261..275
score: 35.63
coord: 43..57
score: 39.77
coord: 89..103
score: 36.67
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 17..56
e-value: 6.1E-4
score: 29.1
coord: 59..102
e-value: 0.052
score: 22.7
coord: 119..172
e-value: 0.6
score: 18.4
coord: 334..382
e-value: 180.0
score: 2.8
coord: 235..274
e-value: 6.0E-5
score: 32.4
coord: 277..325
e-value: 9.5E-5
score: 31.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 250..274
e-value: 0.0014
score: 19.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 24..65
score: 12.546961
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 242..283
score: 12.079106
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 118..371
e-value: 8.2E-34
score: 118.9
coord: 6..114
e-value: 1.4E-18
score: 68.8
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 20..103
coord: 73..346
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 24..61
score: 10.126507
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 242..277
score: 9.836508
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 261..275
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 19..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig886contigA-nodosum_M_contig886:215901..227136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig886.18.1mRNA_A-nodosum_M_contig886.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig886 215901..227136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig886.18.1 ID=prot_A-nodosum_M_contig886.18.1|Name=mRNA_A-nodosum_M_contig886.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=384bp
MSSEVRRSREIFSCFDDKRRHRRLIGHQSRTFDFQFHPVEQVAISASEDG
TGRVWDLSTGKCGKVLAANSREQEVLRACWAPPGEACVAATGSADGIVRL
WGIAGGSNDGPAGVERYRALKVVGSLHHRNEAKGLDGQVYSCQFVPEHAA
GGATAGATRLLTASDQSVHLWDVETCKRVASRALSKVGDHSIGGERNPSD
LSFVFDAKPRPRAGSDVLAVALSDGTVRVGDVLRGRSKPSVLRGRSTAQT
GLAWSDDGTILASCGGDGAVTVWDARTWRIRSTLCGHSRPVYGVVFYPSE
GGESEEASTQLLLSWSSDETICMWDASRAPDNGTALPLATISVEPGFPIY
SCSVSADGRRLAVAGGGPGKAGFLGVPVKLVDLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf