prot_A-nodosum_M_contig8856.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8856.1.1
Unique Nameprot_A-nodosum_M_contig8856.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length121
Homology
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: D7G6K9_ECTSI (Chaperonin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K9_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 5.740e-60
Identity = 97/118 (82.20%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    1 MFIQDDDLVLVYRGPEITEESLKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCIARWEGN 118
            MFI DDDLVLVYRGPE+TE+SLKMVRDQVLVVTEKGESETD GIVI+A  AEK+KASQGRVVA+GEGRT S G I  CPFK GD VKF+EYAP EIKIKG +YAVVRMVDCIARWEG 
Sbjct:  158 MFIMDDDLVLVYRGPELTEDSLKMVRDQVLVVTEKGESETDAGIVIAASTAEKEKASQGRVVAIGEGRTGSTGEIVPCPFKAGDNVKFMEYAPVEIKIKGSYYAVVRMVDCIARWEGE 275          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A7S1UQU6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQU6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 8.020e-23
Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 0
Query:    3 IQDDDLVLVYRGPEITEESLKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCIA 113
            I+DDD++L Y G  +T ++++  RD VLV  E+ + ET  GIVI+A    +D  +QG V  VGEGR TS G  +E P +PGD VKF +YA  E++I GK Y++V+MVD +A
Sbjct:  177 IRDDDVLLFYEGAAMTLDNVQPCRDYVLVELEEEDLETASGIVIAATVTSEDIPNQGIVAKVGEGRLTSSGKFSESPVQPGDMVKFKDYAGNEVRIDGKPYSLVKMVDILA 287          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A7S2LFS4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LFS4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.440e-20
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 0
Query:    3 IQDDDLVLVYRGPEITEESLKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCI 112
            I+DDD++L Y+G  +T  ++   RD VLV  EK ++ET  GIV++    +     +G+V  VGEGR TS G  +  P K GD VKF +YA  E+KI+GK Y++VRMVD +
Sbjct:  144 IRDDDVLLYYKGVRMTLANVIPCRDYVLVAIEKQKTETSSGIVVAETVMKGYNPCEGKVAKVGEGRMTSTGEFSTPPCKEGDFVKFRDYAGNEVKIEGKEYSLVRMVDIL 253          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: W7TNB8_9STRA (20 kDa chaperonin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNB8_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.820e-20
Identity = 47/115 (40.87%), Postives = 78/115 (67.83%), Query Frame = 0
Query:    1 MFIQDDDLVLVYRGPEITEESLKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCIARW 115
            + I+DDD++L + G  +T ++++ VRD++LV  +K + ++ GGI++ A +  K + ++G V+ VG GR  S G +A+   KPGD VKF ++A TEIKI+ + Y V+  VD +ARW
Sbjct:  140 VLIRDDDILLTWTGSSMTLDAVETVRDRILVKVKKAQEKSAGGILL-APSMTKARPTEGEVIKVGPGRIASTGEVADVKVKPGDGVKFKDFAGTEIKIQDENYLVMYSVDVLARW 253          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A7S2S5W6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.960e-18
Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    3 IQDDDLVLVYRGPEITEESLKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCI 112
            I+DDD++L Y G ++T +++   RD VLV   +   ET  GIV++A   + D   +G V  VGEGR  S G     P + G+ VKF +YA  ++KI GK Y++VRMV+ +
Sbjct:   71 IRDDDVMLYYEGVQMTRDNVVPCRDFVLVELSESAMETKSGIVVAASVTKDDLPCEGNVFKVGEGRMCSTGEFTPSPVQIGEKVKFKDYAGNDVKIDGKEYSLVRMVELL 180          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A3C0KSD2_9DELT (Co-chaperonin GroES n=1 Tax=Syntrophus sp. (in: Bacteria) TaxID=48412 RepID=A0A3C0KSD2_9DELT)

HSP 1 Score: 68.6 bits (166), Expect = 1.030e-12
Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 0
Query:   22 LKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCIARWEGN 118
            ++ ++D+V+V     E +T GGI+I   A  K+K  +G+++AVG+G+TT  G + +   K GD V F +YA TE+KI GK Y ++R  D +   EG 
Sbjct:    3 IRPLQDRVIVERLAEEGKTKGGIIIPDTA--KEKPMEGKIIAVGKGKTTEDGKLVKLDVKAGDKVLFSKYAGTEVKIDGKEYLIMREDDILGVIEGK 97          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A2N1VFR5_9BACT (Co-chaperonin GroES n=1 Tax=Ignavibacteriae bacterium HGW-Ignavibacteriae-3 TaxID=2013810 RepID=A0A2N1VFR5_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 1.680e-11
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   22 LKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVD 110
            +K + D+V+V  ++ E  T GGI++   A  K+K  +G++VAVGEG+TT  G + +   K GD V + +Y+ TEIKI G+ Y ++R  D
Sbjct:    6 IKPLGDRVIVKAKEAEETTKGGIILPDTA--KEKPIEGKIVAVGEGKTTDDGKLIKLTLKVGDVVLYGKYSGTEIKIDGEEYLIMRESD 92          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A7C4W9M0_9DELT (Co-chaperonin GroES n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C4W9M0_9DELT)

HSP 1 Score: 63.9 bits (154), Expect = 6.230e-11
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   22 LKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCIA 113
            ++ + D++LV   + E +T GGI+I   A  K+K S+GRV+AVG+GR    GT      K GD + F +YA TE+KI G+ + ++R  D +A
Sbjct:    3 VRPLHDRILVKRLEEEEKTKGGIIIPDTA--KEKPSEGRVIAVGDGRIKEDGTKIPMELKKGDRILFSKYAGTEVKIDGEDHLIMREDDVLA 92          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A4Q6FR31_9PROT (Co-chaperonin GroES n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6FR31_9PROT)

HSP 1 Score: 63.2 bits (152), Expect = 1.240e-10
Identity = 35/91 (38.46%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   22 LKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCI 112
            ++ ++D++LV   + E +T  GI+I   A  K+K  +GRVVAVG GRT   GT+ +   K GD V F +Y+ TE+K++G+ + ++R  D +
Sbjct:    3 IRPLQDRILVKRVEAEQKTASGIIIPDAA--KEKPVEGRVVAVGNGRTLDNGTVQKPDVKSGDTVLFGKYSGTEVKVEGEEFLILREDDIL 91          
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Match: A0A2M7DD36_9BACT (Co-chaperonin GroES n=1 Tax=bacterium (Candidatus Gribaldobacteria) CG02_land_8_20_14_3_00_41_15 TaxID=2014270 RepID=A0A2M7DD36_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 1.270e-10
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   21 SLKMVRDQVLVVTEKGESETDGGIVISAKAAEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKGKFYAVVRMVDCIA 113
            ++K + D+VL+     E +T  GI++  ++AEK++  QG+++AVG GRT + G       K GD V F +Y P E KI GK Y + +  D +A
Sbjct:    2 TIKPLADRVLIEPLPFEEKTKAGIILP-ESAEKERPEQGKIIAVGPGRTVASGKTIPLHVKVGDKVLFTKYGPNEFKIDGKEYLIAKEEDILA 93          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8856.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6K9_ECTSI5.740e-6082.20Chaperonin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A7S1UQU6_9STRA8.020e-2347.75Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2LFS4_9STRA1.440e-2045.45Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
W7TNB8_9STRA1.820e-2040.8720 kDa chaperonin n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A7S2S5W6_9STRA4.960e-1840.91Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A3C0KSD2_9DELT1.030e-1239.18Co-chaperonin GroES n=1 Tax=Syntrophus sp. (in: Ba... [more]
A0A2N1VFR5_9BACT1.680e-1140.45Co-chaperonin GroES n=1 Tax=Ignavibacteriae bacter... [more]
A0A7C4W9M0_9DELT6.230e-1140.22Co-chaperonin GroES n=1 Tax=Deltaproteobacteria ba... [more]
A0A4Q6FR31_9PROT1.240e-1038.46Co-chaperonin GroES n=1 Tax=Proteobacteria bacteri... [more]
A0A2M7DD36_9BACT1.270e-1037.63Co-chaperonin GroES n=1 Tax=bacterium (Candidatus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 46..67
score: 38.4
coord: 81..93
score: 39.98
coord: 22..37
score: 28.06
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 21..115
e-value: 2.4E-13
score: 60.3
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 22..113
e-value: 6.3E-20
score: 71.0
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 22..113
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 21..107
e-value: 6.52509E-18
score: 70.6139
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40GroES chaperonincoord: 18..119
e-value: 5.7E-22
score: 79.7
NoneNo IPR availablePANTHERPTHR10772:SF2410 KDA CHAPERONINcoord: 22..113
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 21..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8856contigA-nodosum_M_contig8856:2410..5899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8856.1.1mRNA_A-nodosum_M_contig8856.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8856 1058..5925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8856.1.1 ID=prot_A-nodosum_M_contig8856.1.1|Name=mRNA_A-nodosum_M_contig8856.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=121bp
MFIQDDDLVLVYRGPEITEESLKMVRDQVLVVTEKGESETDGGIVISAKA
AEKDKASQGRVVAVGEGRTTSVGTIAECPFKPGDCVKFLEYAPTEIKIKG
KFYAVVRMVDCIARWEGNLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR011032GroES-like_sf