prot_A-nodosum_M_contig884.18.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A2P6QT11_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6QT11_ROSCH) HSP 1 Score: 77.4 bits (189), Expect = 1.170e-14 Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = 0
Query: 1 MNDQID----NGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDVE 91
MN++ID G W + PK K ++ +K ++K + DG + +YK R V Q F Q KG Y E+ SP S++R ++A AAM WELR +DV+
Sbjct: 126 MNEEIDALLKQGTWKLVPLPKDKNIVGSKWIYKVKKNPDGTVSRYKARLVAQGFSQEKGLDYDETFSPVVRHSTVRLVIALAAMNRWELRQLDVK 220
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A2P6RCF4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RCF4_ROSCH) HSP 1 Score: 75.1 bits (183), Expect = 8.860e-14 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0
Query: 1 MNDQID----NGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDVE 91
M ++ID G W + PK K ++ +K ++K + DG I +YK R V Q F Q KG Y E+ SP S++R ++A AAM WELR +DV+
Sbjct: 649 MYEEIDALLKQGTWELVPLPKAKNIVGSKWIYKIKKNPDGSISRYKARLVAQGFSQEKGLDYDETFSPVVRHSTVRLVVALAAMNKWELRQLDVK 743
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A5AHM3_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AHM3_VITVI) HSP 1 Score: 69.3 bits (168), Expect = 1.220e-12 Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 0
Query: 1 MNDQID----NGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDVE 91
M +++D N W + P G++V+ K ++K + DG +E+YK R V + F Q G Y E+ +P SS+RA+LA AA + W+L H++V+
Sbjct: 76 MKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGSVERYKARLVAKGFTQEYGIDYEETFAPVACISSVRALLAVAAARKWDLFHMNVK 170
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A7D9ER90_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ER90_PARCT) HSP 1 Score: 68.9 bits (167), Expect = 3.880e-12 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 6 DNGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDVE 91
DN W ++ PK + VL K ++K + G DGQI+KYK R+V + F QV+G + ++ +P + R +LA AA K+ L +DV+
Sbjct: 10 DNKTWTLVREPKDRKVLPGKWVYKVKYGADGQIDKYKARYVAKGFAQVEGLDFSDTYTPKCKPETFRILLAIAAQKDLHLSQMDVK 95
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A7N2MLY8_QUELO (Integrase catalytic domain-containing protein n=5 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2MLY8_QUELO) HSP 1 Score: 70.1 bits (170), Expect = 5.100e-12 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
Query: 1 MNDQID----NGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDVE 91
M +++D N W + P GK+V+ K ++K + DG IE+YK R V + F Q G Y E+ +P SS+RA+LA AA + W+L +DV+
Sbjct: 673 MKEELDALSKNHTWDLVTLPPGKSVVGCKWIYKIKTRSDGSIERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARKWDLFQMDVK 767
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A7N2LTG1_QUELO (Integrase catalytic domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LTG1_QUELO) HSP 1 Score: 70.1 bits (170), Expect = 5.130e-12 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
Query: 1 MNDQID----NGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDVE 91
M +++D N W + P GK+V+ K ++K + DG IE+YK R V + F Q G Y E+ +P SS+RA+LA AA + W+L +DV+
Sbjct: 907 MKEELDALSKNHTWDLVTLPPGKSVVGCKWIYKIKTRSDGSIERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARKWDLFQMDVK 1001
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A392MEN3_9FABA (Retrovirus-related pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MEN3_9FABA) HSP 1 Score: 68.6 bits (166), Expect = 9.150e-12 Identity = 31/90 (34.44%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 1 MNDQIDNGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDV 90
+ D DN W+ ++ P GK + K ++K + +G IE+YK R V + + Q +G Y + SP +++R +LA AA+K W L +DV
Sbjct: 161 LQDLADNQTWIVVELPSGKVPIGCKWVYKIKYHANGSIERYKARLVAKGYTQTEGIDYCDIFSPVAKITTVRVLLALAAIKGWHLEQLDV 250
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A5BI31_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BI31_VITVI) HSP 1 Score: 69.3 bits (168), Expect = 9.450e-12 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0
Query: 6 DNGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDV 90
+NG W PKGK L ++++++ + +G IE+ K R V Q G YHE+ SP +++RA LA AA KNWEL +DV
Sbjct: 620 ENGTWTLEPLPKGKRALGSQSVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDV 704
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A438HFT6_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HFT6_VITVI) HSP 1 Score: 69.3 bits (168), Expect = 9.470e-12 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 6 DNGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDV 90
+NG W PKGK L ++ ++K + +G IE+ K R V Q G YHE+ SP +++RA LA AA KNWEL +DV
Sbjct: 580 ENGTWTLEPLPKGKRALGSQWVYKTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDV 664
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Match: A0A438GLW9_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GLW9_VITVI) HSP 1 Score: 69.3 bits (168), Expect = 9.520e-12 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 6 DNGVWVQMKRPKGKTVLDTKTLFKREIGKDGQIEKYKCRFVTQRFPQVKGFYYHESSSPTPTASSMRAILATAAMKNWELRHIDV 90
+NG W PKGK L ++ +++ + +G IE+ K R V Q G YHE+ SP ++MRA LA AA KNWEL +DV
Sbjct: 746 ENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEVGIDYHETFSPVAKMTTMRAFLAIAASKNWELHQMDV 830 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig884.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig884.18.1 ID=prot_A-nodosum_M_contig884.18.1|Name=mRNA_A-nodosum_M_contig884.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=92bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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