prot_A-nodosum_M_contig883.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig883.4.1
Unique Nameprot_A-nodosum_M_contig883.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length270
Homology
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BLAST of mRNA_A-nodosum_M_contig883.4.1 vs. uniprot
Match: A0A6H5J519_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J519_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 5.740e-132
Identity = 191/268 (71.27%), Postives = 226/268 (84.33%), Query Frame = 0 
Query:    2 IKVTDRAIGEQWTVLRRFRQFEELHRELLHVLSREPDANAYVLPPKEVFGGRHGGVIAKRLKLLKVYLDRLVTCSAAVGHRAMASFLELDPGLRGSCAYGRKHGPGCILKEGPLRVKKWDGPHKPTINILEAGMGLIGWASSYAIVSPGPVFLVYRSSEDDPDKPLWVLPARRTVGSQVRVRRVDYWKADLGKEKTRFFLVRQDVTWEKNSLLCQVQSEALLESWAYALDEDTDLRPQQTKQERAKLDIEIKAKEVWTSREEDVWGGL 269
            ++VTDRA+GEQW VLRRFRQFE LHR LL VLSREPDANAYVLPPKEVFGGRHGGV+AKRLKLL+VYLDRLVTCSAA+ HRA++SFLEL+P LRG  AYGR HGP C+LKEG L V+ W G +KP IN ++AG+ L+GW S++AIVSPGPVFLVY   EDDP+KPLW LP +RT+GSQVRVRRVD  K D+ K+  RFFLV    +WE  SLLCQV SEA L+SWA+A+DE  DLRPQQ++++RAK+DIE+KAKE WT+REE +WGGL
Sbjct:  359 LQVTDRAVGEQWMVLRRFRQFEALHRGLLPVLSREPDANAYVLPPKEVFGGRHGGVVAKRLKLLQVYLDRLVTCSAALEHRALSSFLELEPALRGLGAYGRHHGPECVLKEGRLWVRAWKGAYKPVINFVDAGLHLLGWISAHAIVSPGPVFLVYYGPEDDPEKPLWALPDKRTIGSQVRVRRVDMRKTDVEKDGNRFFLV----SWEDTSLLCQVDSEASLDSWAHAIDETVDLRPQQSEEDRAKVDIELKAKEAWTTREEGLWGGL 622
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BLAST of mRNA_A-nodosum_M_contig883.4.1 vs. uniprot
Match: D8LRJ3_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ3_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 7.030e-100
Identity = 155/225 (68.89%), Postives = 172/225 (76.44%), Query Frame = 0 
Query:    2 IKVTDRAIGEQWTVLRRFRQFEELHRELLHVLSREPDANAYVLPPKEVFGGRHGGVIAKRLKLLKVYLDRLVTCSAAVGHRAMASFLELDPGLRGSCAYGRKHGPGCILKEGPLRVKKWDGPHKPTINILEAGMGLIGWA---------------------SSYAIVSPGPVFLVYRSSEDDPDKPLWVLPARRTVGSQVRVRRVDYWKADLGKEKTRFFLVRQD 205
            I+VTDRAIGEQW VLRRFRQFE LHR LL VLSREPDANAYVLPPKEVFGGRHGGVIAKRLKLLKVYLDRLVTCSAA+ HRA++SFLEL+P LRG  AYGR HGP C+LKEG L V+ W G +KP IN ++AG+ L+GW                      S+YAIVSPGPVFLVY   EDDP+KPLW LP +RT+GSQVRVRRVD  K D  K+  RFFLVR D
Sbjct:  111 IQVTDRAIGEQWMVLRRFRQFEALHRGLLPVLSREPDANAYVLPPKEVFGGRHGGVIAKRLKLLKVYLDRLVTCSAALEHRALSSFLELEPALRGLGAYGRHHGPECVLKEGRLWVRAWKGAYKPVINFVDAGLHLLGWTRRASAELVRLGLTSEAWLSRVSAYAIVSPGPVFLVYYGPEDDPEKPLWTLPDKRTIGSQVRVRRVDMRKTDFEKDGNRFFLVRFD 335
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig883.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J519_9PHAE5.740e-13271.27PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LRJ3_ECTSI7.030e-10068.89PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologyPFAMPF00787PXcoord: 11..90
e-value: 1.1E-9
score: 38.9
IPR001683Phox homologyPROSITEPS50195PXcoord: 1..94
score: 13.210474
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 1..92
e-value: 3.0E-15
score: 58.0
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 10..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig883contigA-nodosum_M_contig883:34493..37571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig883.4.1mRNA_A-nodosum_M_contig883.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig883 33888..50187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig883.4.1 ID=prot_A-nodosum_M_contig883.4.1|Name=mRNA_A-nodosum_M_contig883.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=270bp
MIKVTDRAIGEQWTVLRRFRQFEELHRELLHVLSREPDANAYVLPPKEVF
GGRHGGVIAKRLKLLKVYLDRLVTCSAAVGHRAMASFLELDPGLRGSCAY
GRKHGPGCILKEGPLRVKKWDGPHKPTINILEAGMGLIGWASSYAIVSPG
PVFLVYRSSEDDPDKPLWVLPARRTVGSQVRVRRVDYWKADLGKEKTRFF
LVRQDVTWEKNSLLCQVQSEALLESWAYALDEDTDLRPQQTKQERAKLDI
EIKAKEVWTSREEDVWGGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683PX_dom
IPR036871PX_dom_sf