prot_A-nodosum_M_contig883.10.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig883.10.2
Unique Nameprot_A-nodosum_M_contig883.10.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length544
Homology
BLAST of mRNA_A-nodosum_M_contig883.10.2 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 2.430e-88
Identity = 216/450 (48.00%), Postives = 265/450 (58.89%), Query Frame = 0
Query:   94 GLLLASGGRWRED-DEEDDRTVGRSRRRNRSE------PWEDIQWSNVSVKRDARASGGRRDGGRGRERVDDDGDIDDEEDVEEEYLGLEGPEGRSARFLREDDGFEGDSEDSYWGGAPPRRPAERETARLGERNGVEESPL---WNRG-WFDDAQETKQSGLLRWARGFYNALFWYG-AASEDREQLPAMNFQDLLERFDAFSGSRPPETSRPIVPPEDLGAEQDYRWRPGRRDSVPVGASRRREEPNASYDGASGRRRTARDGRRKPAREDRVRSSASRDDPQL------RRREEVFRDG---------DGDRVMIRQLRRKQRQLADREHGLEMDLEKIQERLGVVDATVELWLRRSQAMLARGNTDTDTEMLQAKRRIYQLKDEGRQLDIAKLELEERLKDCRAKLDRIVQELEGLGEDAVPIVSFEPTGGEEMETEGTVAVEAPI 516
            GL+ A+  RW  D DE D    G+ RRR          PWEDIQWSN S     RA+       RG ERV    D+DDEE+ EEE LGLE      +R + +  G+    +D+     P RR +         R+ ++  P+   W+   WF  AQE  Q GL  WAR FYN LFWYG A+SE  ++LPAMNFQDLLERFD  +G +     RPIVPPEDL AEQD+RWRP  R++   GA+   E  N S   A GR  TA  G    +R    R+   RD+  L      R   E+   G         DGD V I QLRRKQRQLA+REH  E+DLEK+++RL VVDATVELW+RRS  ML+RG ++TDT++LQAKRRIY LK+EGRQLD A +ELE RL+DCRAKLDRIVQELE LGE A+P   + P  G++        VEA I
Sbjct:   77 GLIAATASRWGADGDELDGGNDGKDRRRRAERRKPLRAPWEDIQWSNPSNPSSRRAA-------RGGERVAWK-DVDDEEE-EEEMLGLED----GSRSMVQPRGYTRSYDDADVDTRPRRRRS---------RDDIDAEPVPTGWDTAQWFTGAQEANQGGLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQSSARPRPIVPPEDLAAEQDFRWRPSGREAT-GGATATAESTNWSR--AKGRGSTASGGATGSSRR---RARRERDERDLDWESVGRAEREMHAAGGRGRREGGDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQAKRRIYGLKEEGRQLDSATVELEGRLEDCRAKLDRIVQELEFLGEAAMPRAFYTPGEGDDEIVAKAETVEAGI 498          
BLAST of mRNA_A-nodosum_M_contig883.10.2 vs. uniprot
Match: D8LRJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ5_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.170e-55
Identity = 121/245 (49.39%), Postives = 154/245 (62.86%), Query Frame = 0
Query:  220 RNGVEESPL---WNRG-WFDDAQETKQSGLLRWARGFYNALFWYG-AASEDREQLPAMNFQDLLERFDAFSGSRPPETSRPIVPPEDLGAEQDYRWRPGRRDSV------PVGASRRREEPNASYDGASGRRRTARDGRRKPAREDRVRSSASRDDPQLR----RREEVFRDGDGDRVMIRQLRRKQRQLADREHGLEMDLEKIQERLGVVDATVELWLRRSQAMLARGNTDTDTEMLQAKRRIY 449
            R+G++  P+   W+   WF  AQE  Q GL  WAR FYN LFWYG A+SED ++LPAMNFQDLLERFD  +G +     RPIVPPEDL AEQD+ W+P  R++         G +R R +   S       R T R  RR+    D    +  R + ++R    R     RD DGD V I QLRRKQRQLA+REH  E+DLEK+++RL VVDATVELW+RRS  ML+RG ++TDT++LQ  RR +
Sbjct:   36 RDGIDAEPVPTGWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSSTRPRPIVPPEDLAAEQDFLWQPSGREATGGATAAAEGTNRSRSKDRGSTVSGGATRSTRRRARREREERDLDWENVGRAEREMRAAGGRGRREGRD-DGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQTMRRDH 279          
BLAST of mRNA_A-nodosum_M_contig883.10.2 vs. uniprot
Match: A0A836C9G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.100e-24
Identity = 90/264 (34.09%), Postives = 125/264 (47.35%), Query Frame = 0
Query:  244 GLLRWARGFYNALFWYGAASEDREQLPAMNFQDLLERFDA-----------------FSGSRPPETSRPI---VPPEDLGAEQD--YRWRPGR-RDSVPVGASRRREEPNASYDGASGRRRTARDGRRKPAREDRVRSSASRDDPQLRRREEVFRDGDGDRVMIRQLRRKQRQLADREHGLEMDLEKIQERLGVVDATVELWLRRSQAMLAR----GNTDTDTEMLQAKRRIYQLKDEGRQLDIAKLELEERLKDCRAKLDRIV 480
            G +RW RGFYNALFWYGAA +D + LPAM+F+DL+E+++                   SG R     R +   VPP +   + D  +RW PG  RD  P   S    +P+                RR P                                    LRR+ R L  +   L  DL K+ ERL V+D T+ELWLRR +A+ AR    G  D   E++ AKRR+Y+L+D+GR L+ A++EL  RL++  A L R++
Sbjct:    2 GFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTS---TQPD----------------RRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADA-AELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVL 245          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig883.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J5V9_9PHAE2.430e-8848.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRJ5_ECTSI1.170e-5549.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9G9_9STRA1.100e-2434.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 462..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig883contigA-nodosum_M_contig883:50600..57271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig883.10.2mRNA_A-nodosum_M_contig883.10.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig883 50557..57663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig883.10.2 ID=prot_A-nodosum_M_contig883.10.2|Name=mRNA_A-nodosum_M_contig883.10.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=544bp
MSPSSAAQTTCLVLATLAEIPAPQAFLESCSACAFCGGGAAPCRGTPFCR
KGSSSSSTYRRTRWNTAALPGSSQARFPYLRTGRIENTRSNYGGLLLASG
GRWREDDEEDDRTVGRSRRRNRSEPWEDIQWSNVSVKRDARASGGRRDGG
RGRERVDDDGDIDDEEDVEEEYLGLEGPEGRSARFLREDDGFEGDSEDSY
WGGAPPRRPAERETARLGERNGVEESPLWNRGWFDDAQETKQSGLLRWAR
GFYNALFWYGAASEDREQLPAMNFQDLLERFDAFSGSRPPETSRPIVPPE
DLGAEQDYRWRPGRRDSVPVGASRRREEPNASYDGASGRRRTARDGRRKP
AREDRVRSSASRDDPQLRRREEVFRDGDGDRVMIRQLRRKQRQLADREHG
LEMDLEKIQERLGVVDATVELWLRRSQAMLARGNTDTDTEMLQAKRRIYQ
LKDEGRQLDIAKLELEERLKDCRAKLDRIVQELEGLGEDAVPIVSFEPTG
GEEMETEGTVAVEAPIPVAEAVRLDVELIEERDKEAMPIVEET*
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