prot_A-nodosum_M_contig881.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig881.9.1
Unique Nameprot_A-nodosum_M_contig881.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length254
Homology
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BLAST of mRNA_A-nodosum_M_contig881.9.1 vs. uniprot
Match: D8LIB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB4_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 7.000e-102
Identity = 171/235 (72.77%), Postives = 191/235 (81.28%), Query Frame = 0 
Query:    5 ANKGAA-ATTVYNPYKIFQAAQRCMGDPSVVAKVLVELLGDYAAPDVFMASTASVLSLYYSKGGLRKSSMTDFGKFAGELADELGKRDSPKAEDKMREAQSVYELFEEADTDGNGTISKQEFLNFGSKIGVPTEEEGLXXXXXXXXXXXXXXXXXXXXHFCVPGVGRDKNGFDCAGHHGLRSYVAVTDGVACKWCEMLSPKGSKMFGCRECDCDACLDCAIYHVKTCTTRIVCDR 238
            AN+GAA A+TVY+PYKIFQAAQRCMGDPSVVAKVLVELLGD A PDV MAS ASVL +YY  GGLRK+SMTDFGKFAGELADELG R+S +AE+KM+EAQSVYELFEEADTD +GTISKQEF  FGS I V ++EE LXXXXXXXXXXXXXXX      FCVPG GRD N F+CAG HGL+S  A  D   C WC    P GS+MF CRECDCDACL+CAI H+++C TRI C+R
Sbjct:    6 ANRGAASASTVYDPYKIFQAAQRCMGDPSVVAKVLVELLGDCATPDVLMASAASVLEIYYGGGGLRKTSMTDFGKFAGELADELGARNSTQAEEKMKEAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCAAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECAILHLQSCDTRIFCER 240
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig881.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIB4_ECTSI7.000e-10272.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 139..167
e-value: 9.6
score: 9.8
coord: 104..132
e-value: 8.7E-5
score: 31.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 105..163
e-value: 9.5E-10
score: 38.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 137..170
score: 8.432208
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 100..135
score: 12.7281
IPR002048EF-hand domainCDDcd00051EFhcoord: 107..163
e-value: 2.55488E-12
score: 58.3281
NoneNo IPR availableGENE3D1.10.238.10coord: 48..172
e-value: 1.2E-16
score: 62.9
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 113..125
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 148..160
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 102..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig881contigA-nodosum_M_contig881:141050..148640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig881.9.1mRNA_A-nodosum_M_contig881.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig881 140771..162018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig881.9.1 ID=prot_A-nodosum_M_contig881.9.1|Name=mRNA_A-nodosum_M_contig881.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=254bp
MSAFANKGAAATTVYNPYKIFQAAQRCMGDPSVVAKVLVELLGDYAAPDV
FMASTASVLSLYYSKGGLRKSSMTDFGKFAGELADELGKRDSPKAEDKMR
EAQSVYELFEEADTDGNGTISKQEFLNFGSKIGVPTEEEGLELFVQVDTD
QNGVISFLEWLHFCVPGVGRDKNGFDCAGHHGLRSYVAVTDGVACKWCEM
LSPKGSKMFGCRECDCDACLDCAIYHVKTCTTRIVCDRVASSVCALGSGS
VGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair