prot_A-nodosum_M_contig881.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig881.5.1
Unique Nameprot_A-nodosum_M_contig881.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length230
Homology
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.220e-41
Identity = 94/222 (42.34%), Postives = 118/222 (53.15%), Query Frame = 0
Query:   18 DGNEAQVGCAEEF-VEYFRDGWCNDESNNERCAYDGGDCCPCTCNNGLGYECGI-NDFFCRDPDSGCVDP---RIEMYPKCTEGYVPDIGNQRCDETNNNEECGYDGGDCCECT----HTDDGSSASFWLCVDPSAPCYDPVAVTLQ--SNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECT---RTDNESSPPFSLCVDPSVSCY--DPAAVNLQSNC 223
            D +E  VG  E        DG+CN ++NNE CAYDGGDCC CTC +     CG  + F C DP + CVD     ++M   C   Y   IGN  CD  NNNE C YDGGDCCECT      DD +  + + CVDP+APC D  +VT+    NC       I DG C+++ N   C YDGGDCC CT     D++       C+DP  +C   D   V++  NC
Sbjct:  202 DDDEVTVGMVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCE--YPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLEDDDWACRNNFACVDPNAPCVDDDSVTIDMLENCP--WAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNC 419          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 9.790e-40
Identity = 85/198 (42.93%), Postives = 105/198 (53.03%), Query Frame = 0
Query:   36 DGWCNDESNNERCAYDGGDCCPCTCNNGLGYECGINDFFCRDPDSGCVDP---RIEMYPKCTEGYVPDIGNQRCDETNNNEECGYDGGDCCECT---------HTDDGSSASFWLCVDPSAPCYDP--VAVTLQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECT-----RTDNESSPPFSL--CVDPSVSCY 212
            DG+C++  N   CAYDGGDCC CTC +    + G   F C DP++ CVD     ++M+  C   Y  DIGN  CDE NN E CGYDGGDCCECT           D       + C+DPSAPC D   + V +  NC  G +  I +G C+  NN E C YDGGDCC CT       D   S  +    C DP+ SC+
Sbjct:  133 DGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDDITVDMFENCE--YPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENC--GYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCF 326          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 5.640e-39
Identity = 84/197 (42.64%), Postives = 108/197 (54.82%), Query Frame = 0
Query:   50 YDGGDCCPCTCNNGLG--YECGIND--FFCRDPDSGCVDPRIEMYPKCTEGYVPDIGNQRCDETNNNEECGYDGGDCCECTHT----DDGSSASFWLCVDPSAPCYDP--VAVTLQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECT----RTDNESSPPFS-------LCVDPSVSCY--DPAAVNLQSNC 223
            +DGGDCC CTC +     Y C   D  F C DP + CVD       +    +  + G+  CD+ NNNE CGYDGGDCCECT      DD S A+   C+DPSAPC D   V V +  NC  G + ++ +G C++ENNNEGC YDGGDCCECT     TD+ +   F         C+DP+  C   D   +++  NC
Sbjct:    6 FDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNCFPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENC--GYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENC 200          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 6.760e-39
Identity = 87/212 (41.04%), Postives = 107/212 (50.47%), Query Frame = 0
Query:   34 FRDGWCNDESNNERCAYDGGDCCPCTCNNGLGYE----CGIND--FFCRDPDSGCVDPRIEMYPKCTEGYVPDIGNQRCDETNNNEECGYDGGDCCECT---HTDDGSSASFWL-------CVDPSAPCY--DPVAVTLQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECTRTDNESSPPFS--LCVDPSVSCYDPAAVNLQ--SNC 223
            + DG+C   +NN  C YDGGDCC CTC N  G +    C  N   F C DPD+ C            E    D+G+  CD+ NNNE CGYDGGDCCECT    TDD      ++       C+DPSAPC   D + V +  +C       + DG C+ +NNN  C YDGGDCCECT   N      S   C+DP   C D  +V +    NC
Sbjct:   36 YGDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESC---DAVGMGDGYCDMDNNNAACAYDGGDCCECTCEPNNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNC 244          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 8.650e-38
Identity = 92/218 (42.20%), Postives = 121/218 (55.50%), Query Frame = 0
Query:   19 GNEAQVGCAEEFVEYFRDGWCNDESNNERCAYDGGDCCPCTC---NNGLGYE---CGINDFF-CRDPDSGCV--DPRIEMYPKCTE----GYVPDIGNQRCDETNNNEECGYDGGDCCECTHTDDGSSASF--WLCVDPSAPCYDPVAVTLQS--NCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECTRT--DNESSPPFSLCVDPSV-SCYDPAA 216
            G E    C + +     DG C+ ++N E C YDGGDCC CTC   ++G G +   CG +  F C DPD+ CV  D      P+  +    G +  + +  CD+ NNNEECGYDGGDCC CT  DD        + C+DPSA C D   VT+ +  NC    + +I DGQC+ +NN E C YDGGDCC CT    D++S    SLC + +V +C DP A
Sbjct:   91 GTETVQNCGDPWA--IGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVTVDTVENC---GVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDA 303          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.300e-37
Identity = 86/202 (42.57%), Postives = 103/202 (50.99%), Query Frame = 0
Query:   37 GWCNDESNNERCAYDGGDCCPCTCNNGLGYECG-INDFFCRDPDSGCVDP---RIEMYPKCTEGYVPD-IGNQRCDETNNNEECGYDGGDCCECTHT-------DDGSSASFWL-----CVDPSAPCYDPVAVT--LQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECTRTDNESS------PPFSLCVDPSVSCYD 213
            G CN  +N E C +DGGDCC CTC +G  Y CG    + C DPD+ CVD     ++M   C   Y P  IGN  CD   NNE+C YDGGDCCECT         D G      +     C+DP APC D   VT  +   C+ G I N   G C+D NN+  C YDGGDCCECT   ++        P    C+DP   C D
Sbjct:  101 GRCNMGNNIEECGFDGGDCCECTCEDGE-YTCGQYYGYACIDPDATCVDDDAVTVDMMENC---YDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCSTGQIGN---GYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEAECVD 295          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.630e-37
Identity = 90/213 (42.25%), Postives = 120/213 (56.34%), Query Frame = 0
Query:   30 FVEYFRDGWCNDESNNERCAYDGGDCCPCTC----NNGLGYECGINDFFCRDPDSGCVDPRIEMYPKCTEGYVPD---IGNQRCDETNNNEECGYDGGDCCECTHTDDGSS---ASFWLCVDPSAPCYDPVAVTLQS--NCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECT----RTDNESSPPFS--LCVDPSVSCYDPA-AVNLQSNC 223
            +V    +G+CN+ +N E C YD GDCC CTC    ++   + C   DF C DP++ CVD  +      TEG   D    G+  C++ NNNE+CGYDGGDCCECT   D S+    + + C+DP+APC D   VT  +  NC    I  + DG C+  NNNE C YDGGDCCECT     TD       S  +C+DP+ SC+D +  V++   C
Sbjct:  141 YVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCV--DFACVDPNAPCVDDDV------TEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCM---IEYLGDGYCDTYNNNEICDYDGGDCCECTCGSDSTDVLVGSDCSDFVCIDPTASCFDESITVDMYEYC 342          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: D8LEX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX5_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 6.260e-36
Identity = 86/208 (41.35%), Postives = 109/208 (52.40%), Query Frame = 0
Query:   34 FRDGWCNDESNNERCAYDGGDCCPCTC--NNGLGYECGINDFFCRDPDSGCVDPRIEMYPKCTEGYVPD-IGNQRCDETNNNEECGYDGGDCCECTHTDDGS-----SASFWLCVDPSAPCYDP-VAVTLQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCE--CTRTDNESSPPFSL----CVDPSVSCYDPAAVNLQSNCPDG 226
            F DG+C+D +NNE+C YDGGDCC CTC  +     E    +F C DP + C D   ++     E  + D +G+  CD +NN E CGYD GDCCECT           S S + CVDP A C+D  + V +  NC D  +  + DG C + NNNE C YD GDCCE  C    +ES   F+     C+DP      P    L S CP G
Sbjct:    8 FGDGFCDDYNNNEQCGYDGGDCCECTCVVSTLWSTESSCTEFACIDPRAPCADDD-DITADAVESCIIDYLGDGICDTSNNIETCGYDSGDCCECTXXXXXXXXXXXSCSDFACVDPMASCFDESITVDMFENC-DAEL--LGDGYCQESNNNEICDYDFGDCCESTCGVDFSESLDEFACSSFACIDPRFVTQSPTPAPLSSECPGG 211          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.130e-35
Identity = 83/208 (39.90%), Postives = 101/208 (48.56%), Query Frame = 0
Query:   34 FRDGWCNDESNNERCAYDGGDCCPCTCNNGLGYECGINDFFCRDPDSGCVDP---RIEMYPKCTEGYVPDIGNQRCDETNNNEECGYDGGDCCECTHTDDGSSA------SFWLCVDPSAPCYDP-VAVTLQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECT------RTDNESSPPFSLCVDPSVSCYDPAAVNLQSNCPD 225
            F DG+CND +NNE+C YDGGDCC CTC      E G  +F C DP + CVD      +    C   Y   +G+  CD  NN E C YDGGDCCECT   D +            C+DP+A C+D  + V +   C    +  + D  CN  NN E C YD GDCCE T       T +E S     C+DP      P    L S C D
Sbjct:   62 FGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCMMEY---LGDGYCDTYNNIEICDYDGGDCCECTCGSDSTDVLDXXXXXXXXCIDPTASCFDENITVDMYEYC---DVELLGDSICNLSNNFEVCDYDFGDCCEATCGVDSSGTLDELSCSSFACIDPQFVTPAPTPAPLSSECLD 263          
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 5.130e-32
Identity = 83/205 (40.49%), Postives = 107/205 (52.20%), Query Frame = 0
Query:   50 YDGGDCCPCTCNNGLG----YECGIND--FFCRDPDSGCVDP---RIEMYPKC-TEGYVPDIGNQRCDETNNNEECGYDGGDCCECT------HTDDGSSASFWLCVDPSAPCYDPVAVTLQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECTRT-----------DNESSPPFS--LCVDPSVSCY--DPAAVNLQSNC 223
            YDGGDCC CTC N  G    + C  +   F C DPD+ CVD     +E+   C T G    +G+  CD+ NNNE CGYDGGDCCECT        DD +  ++  C+DP APC D   +T       G +  + DG C+++NNNE C YDGGDCCECT             D+   P  S   C+DP+  C   D   V++  +C
Sbjct:   21 YDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCDTWG----LGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESC 221          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig881.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JM92_9PHAE1.220e-4142.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F4_ECTSI9.790e-4042.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S4_ECTSI5.640e-3942.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4F9_ECTSI6.760e-3941.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTT4_9PHAE8.650e-3842.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP6_ECTSI1.300e-3742.57Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE2.630e-3742.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEX5_ECTSI6.260e-3641.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSR3_ECTSI1.130e-3539.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR2_9PHAE5.130e-3240.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 19..56
e-value: 0.13
score: 7.8
coord: 82..123
e-value: 3.3E-4
score: 29.0
coord: 151..188
e-value: 0.0039
score: 20.2
IPR000800Notch domainPFAMPF00066Notchcoord: 101..122
e-value: 2.4E-4
score: 21.5
NoneNo IPR availableGENE3D4.10.470.20coord: 90..191
e-value: 3.5E-9
score: 38.8
IPR043543Pappalysin-1/2PANTHERPTHR46130FAMILY NOT NAMEDcoord: 157..218
coord: 21..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig881contigA-nodosum_M_contig881:83178..83867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig881.5.1mRNA_A-nodosum_M_contig881.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig881 58292..83867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig881.5.1 ID=prot_A-nodosum_M_contig881.5.1|Name=mRNA_A-nodosum_M_contig881.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=230bp
MVGRIIVYASLLFVLPGDGNEAQVGCAEEFVEYFRDGWCNDESNNERCAY
DGGDCCPCTCNNGLGYECGINDFFCRDPDSGCVDPRIEMYPKCTEGYVPD
IGNQRCDETNNNEECGYDGGDCCECTHTDDGSSASFWLCVDPSAPCYDPV
AVTLQSNCTDGSIPNIEDGQCNDENNNEGCLYDGGDCCECTRTDNESSPP
FSLCVDPSVSCYDPAAVNLQSNCPDGHIEN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom
IPR043543PAPPA/PAPPA2