prot_A-nodosum_M_contig8802.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8802.2.1
Unique Nameprot_A-nodosum_M_contig8802.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length45
Homology
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BLAST of mRNA_A-nodosum_M_contig8802.2.1 vs. uniprot
Match: D7FJT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT4_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.250e-9
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:    1 FVPGVIVDYVAGRALPRASNWLKPTCERKKLREL 34
            FVPG IVDY AGRALPRASNW+KPTCE  + R+L
Sbjct:  389 FVPGAIVDYAAGRALPRASNWIKPTCEAAQRRKL 422
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BLAST of mRNA_A-nodosum_M_contig8802.2.1 vs. uniprot
Match: A0A835ZLE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE1_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.270e-6
Identity = 22/27 (81.48%), Postives = 23/27 (85.19%), Query Frame = 0 
Query:    2 VPGVIVDYVAGRALPRASNWLKPTCER 28
            VPG +VDY A RALPRAS WLKPTCER
Sbjct:  168 VPGFLVDYAAARALPRASTWLKPTCER 194
[Close]
BLAST of mRNA_A-nodosum_M_contig8802.2.1 vs. uniprot
Match: A0A835ZEL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL5_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 5.140e-5
Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0 
Query:    2 VPGVIVDYVAGRALPRASNWLKPTCER 28
            VPG +VDY A RALPRA+ W+KP CER
Sbjct:   91 VPGFLVDYAAARALPRATAWVKPACER 117
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8802.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJT4_ECTSI3.250e-976.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLE1_9STRA1.270e-681.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEL5_9STRA5.140e-570.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8802contigA-nodosum_M_contig8802:4945..5088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8802.2.1mRNA_A-nodosum_M_contig8802.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8802 4945..5171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8802.2.1 ID=prot_A-nodosum_M_contig8802.2.1|Name=mRNA_A-nodosum_M_contig8802.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=45bp
FVPGVIVDYVAGRALPRASNWLKPTCERKKLRELASTRRGARDR*
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