prot_A-nodosum_M_contig88.69.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig88.69.1
Unique Nameprot_A-nodosum_M_contig88.69.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length295
Homology
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BLAST of mRNA_A-nodosum_M_contig88.69.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.380e-24
Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 0 
Query:   10 LCTHEDIVCTLVDFVGAKQFLFLATVSRLWRQAWGRRPTITSWATQHSSAAQMLDSFESGLP-DREEICAAIARLGNLSALRRARQSDRRWNHRTCYEA 107
            L  + D++ ++V FV  KQFLF A VSR WR+AWG RP +TSW T+ SS +Q+  SFE GLP DR E+CAAIARLGNL  LR AR S   WN  T  EA
Sbjct:   57 LADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLTFSEA 155
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BLAST of mRNA_A-nodosum_M_contig88.69.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 7.410e-17
Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 0 
Query:   15 DIVCTLVDFVGAKQFLFLATVSRLWRQAWGRRPTITSWATQHSSAAQMLDSFESGLPDREEICAAIARLGNLSALRRARQSDRRWNHRTC 104
            DIV T+ +FV   Q+LF A+VSR WR  WG+RPT+T   T  +S  Q+  SFE GL     +C  +A LG L  LRRAR    +WN  TC
Sbjct:    8 DIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCQWNENTC 97
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BLAST of mRNA_A-nodosum_M_contig88.69.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.780e-16
Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 0 
Query:   15 DIVCTLVDFVGAKQFLFLATVSRLWRQAWGRRPTITSWATQHSSAAQMLDSFESGLPDREEICAAIARLGNLSALRRARQSDRRWNHRTCY 105
            DIV T+ +FV   Q+LF A+VSR WR  WG+RPT+T   T  +S +Q+  SFE GL     +C  +A LG L  LRRAR     WN  TCY
Sbjct:   10 DIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCPWNENTCY 100
[Close]
BLAST of mRNA_A-nodosum_M_contig88.69.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.110e-13
Identity = 40/86 (46.51%), Postives = 49/86 (56.98%), Query Frame = 0 
Query:   20 LVDFVGAKQFLFLATVSRLWRQAWGRRPTITSWATQHSSAAQMLDSFESGLPDREEICAAIARLGNLSALRRARQSDRRWNHRTCY 105
            L +FV   Q LF A+VSR WR  WG+RPT+T   T  +S  Q+  SFE GL     +C  +A LG L  L+RAR     WN  TCY
Sbjct:   31 LAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMGCPWNENTCY 116
[Close]
BLAST of mRNA_A-nodosum_M_contig88.69.1 vs. uniprot
Match: D7FH77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH77_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.870e-11
Identity = 40/92 (43.48%), Postives = 51/92 (55.43%), Query Frame = 0 
Query:   13 HEDIVCTLVDFVGAKQFLFLATVSRLWRQAWGRRPTITSWATQHSSAAQMLDSFESGLP-DREEICAAIARLGNLSALRRARQSDRRWNHRT 103
            + DI+  L+ FV  + FLF   V R WR AWG RPT T  AT   +  Q+   F+ GL     E+CAAIARLG++  L  AR +  RW   T
Sbjct:   12 NPDILGCLISFVADESFLFFGPVCRDWRAAWGNRPTTTRIATSDLTPTQLQRGFDCGLTRTNPELCAAIARLGDVDLLELARDNGCRWGAST 103
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig88.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KPZ6_9PHAE2.380e-2457.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L0J7_9PHAE7.410e-1747.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMS7_ECTSI1.780e-1648.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0K8_9PHAE1.110e-1346.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH77_ECTSI2.870e-1143.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 41..288
e-value: 3.3E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 67..289
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 67..289
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 184..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig88contigA-nodosum_M_contig88:707544..708428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig88.69.1mRNA_A-nodosum_M_contig88.69.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig88 686603..708957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig88.69.1 ID=prot_A-nodosum_M_contig88.69.1|Name=mRNA_A-nodosum_M_contig88.69.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=295bp
MTARNRAGPLCTHEDIVCTLVDFVGAKQFLFLATVSRLWRQAWGRRPTIT
SWATQHSSAAQMLDSFESGLPDREEICAAIARLGNLSALRRARQSDRRWN
HRTCYEAAKGGHLHVLRWAVENGCVLSVSTYCGAAEAGHLAILQWAKNRG
CPLTPLVCRVAAREGHLSALRWARTNGCRWDNTTCSEAAGGGHLEVLKWA
RDHGCPWNFWTCHLAARGGHLGVLKWARDSGCPWGEGTCSAAAFGGHLEV
LQWARENGCPWDEWTLILAAQERQRRVVEWAERNGCPRPGWWRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf